RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 KRTAP5-4Q6L8H1 288 aa7.71□□□□□ -1.18
TRAPPC4-208ENST00000527680 KRTAP4-6Q9BYQ5 205 aa7.68□□□□□ -1.18
TRAPPC4-208ENST00000527680 AHNAK2Q8IVF2 5795 aa7.65□□□□□ -1.19
TRAPPC4-208ENST00000527680 ANAPC13Q9BS18 74 aa7.6□□□□□ -1.19
TRAPPC4-208ENST00000527680 KRTAP5-10Q6L8G5 202 aa7.58□□□□□ -1.2
TRAPPC4-208ENST00000527680 KRTAP4-7Q9BYR0 210 aa7.56□□□□□ -1.2
TRAPPC4-208ENST00000527680 PRR15LQ9BU68 103 aa7.54□□□□□ -1.2
TRAPPC4-208ENST00000527680 KRTAP12-3P60328 96 aa7.53□□□□□ -1.2
TRAPPC4-208ENST00000527680 KRTAP5-3Q6L8H2 238 aa7.38□□□□□ -1.23
TRAPPC4-208ENST00000527680 CCDC179H3BU77 68 aa7.34□□□□□ -1.23
TRAPPC4-208ENST00000527680 KRTAP20-2Q3LI61 65 aa7.33□□□□□ -1.24
TRAPPC4-208ENST00000527680 KRTAP5-7Q6L8G8 165 aa7.33□□□□□ -1.24
TRAPPC4-208ENST00000527680 LINC01558Q9Y6Z2 57 aa7.33□□□□□ -1.24
TRAPPC4-208ENST00000527680 ATP5EP56381 51 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC4-208ENST00000527680 KRTAP12-4P60329 112 aa7.28□□□□□ -1.24
TRAPPC4-208ENST00000527680 KRTAP5-5Q701N2 237 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC4-208ENST00000527680 SPRR5A0A1B0GTR4 108 aa7.26□□□□□ -1.25
TRAPPC4-208ENST00000527680 UQCR11O14957 56 aa7.26□□□□□ -1.25
TRAPPC4-208ENST00000527680 TMEM258P61165 79 aa7.2□□□□□ -1.26
TRAPPC4-208ENST00000527680 LOC100996750A0A140TA64 210 aa7.18□□□□□ -1.26
TRAPPC4-208ENST00000527680 KRTAP25-1Q3LHN0 102 aa7.18□□□□□ -1.26
TRAPPC4-208ENST00000527680 RPS28P62857 69 aaKnown RBP7.1□□□□□ -1.27
TRAPPC4-208ENST00000527680 MIR22HGQ0VDD5 57 aa7.07□□□□□ -1.28
TRAPPC4-208ENST00000527680 SYNE1Q8NF91 8797 aaKnown RBP7.07□□□□□ -1.28
TRAPPC4-208ENST00000527680 K7ERS5 55 aa7.05□□□□□ -1.28
TRAPPC4-208ENST00000527680 KRTAP19-4Q3LI73 84 aa7.05□□□□□ -1.28
TRAPPC4-208ENST00000527680 KRTAP15-1Q3LI76 137 aa6.94□□□□□ -1.3
TRAPPC4-208ENST00000527680 LCE3CQ5T5A8 94 aa6.9□□□□□ -1.3
TRAPPC4-208ENST00000527680 KRTAP23-1A1A580 65 aa6.86□□□□□ -1.31
TRAPPC4-208ENST00000527680 SVIPQ8NHG7 77 aa6.8□□□□□ -1.32
TRAPPC4-208ENST00000527680 KRTAP4-11Q9BYQ6 195 aa6.79□□□□□ -1.32
TRAPPC4-208ENST00000527680 PSPHP1O15172 72 aa6.78□□□□□ -1.32
TRAPPC4-208ENST00000527680 MT1AP04731 61 aa6.73□□□□□ -1.33
TRAPPC4-208ENST00000527680 KRTAP6-1Q3LI64 71 aa6.73□□□□□ -1.33
TRAPPC4-208ENST00000527680 V9GYY9 64 aa6.71□□□□□ -1.34
TRAPPC4-208ENST00000527680 KRTAP5-2Q701N4 177 aa6.69□□□□□ -1.34
TRAPPC4-208ENST00000527680 Q1T7F1 81 aa6.6□□□□□ -1.35
TRAPPC4-208ENST00000527680 CDC42SE1Q9NRR8 79 aa6.59□□□□□ -1.35
TRAPPC4-208ENST00000527680 KRTAP9-4Q9BYQ2 154 aa6.57□□□□□ -1.36
TRAPPC4-208ENST00000527680 A6NED7 52 aa6.54□□□□□ -1.36
TRAPPC4-208ENST00000527680 KRTAP5-8O75690 187 aa6.53□□□□□ -1.36
TRAPPC4-208ENST00000527680 PRO0628Q9UI54 55 aa6.52□□□□□ -1.37
TRAPPC4-208ENST00000527680 KRTAP6-2Q3LI66 62 aa6.5□□□□□ -1.37
TRAPPC4-208ENST00000527680 KRTAP9-6A8MVA2 160 aa6.47□□□□□ -1.37
TRAPPC4-208ENST00000527680 ROMO1P60602 79 aa6.45□□□□□ -1.38
TRAPPC4-208ENST00000527680 OBSCNQ5VST9 7968 aa6.45□□□□□ -1.38
TRAPPC4-208ENST00000527680 BRK1Q8WUW1 75 aa6.44□□□□□ -1.38
TRAPPC4-208ENST00000527680 AHNAKQ09666 5890 aaKnown RBP6.33□□□□□ -1.4
TRAPPC4-208ENST00000527680 MUC5ACP98088 5654 aa6.33□□□□□ -1.4
TRAPPC4-208ENST00000527680 KRTAP9-9Q9BYP9 154 aa6.32□□□□□ -1.4
TRAPPC4-208ENST00000527680 MUC5BQ9HC84 5762 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC4-208ENST00000527680 MT3P25713 68 aa6.21□□□□□ -1.42
TRAPPC4-208ENST00000527680 PMAIP1Q13794 54 aa6.11□□□□□ -1.43
TRAPPC4-208ENST00000527680 KRTAP5-1Q6L8H4 278 aa6.08□□□□□ -1.44
TRAPPC4-208ENST00000527680 KTN1-AS1Q86SY8 53 aa6.01□□□□□ -1.45
TRAPPC4-208ENST00000527680 LCE1EQ5T753 118 aa5.73□□□□□ -1.49
TRAPPC4-208ENST00000527680 PRAC1Q96KF2 57 aa5.58□□□□□ -1.52
TRAPPC4-208ENST00000527680 LCE1BQ5T7P3 118 aa5.51□□□□□ -1.53
TRAPPC4-208ENST00000527680 KRTAP4-2Q9BYR5 136 aa5.42□□□□□ -1.54
TRAPPC4-208ENST00000527680 LCE1CQ5T751 118 aa5.32□□□□□ -1.56
TRAPPC4-208ENST00000527680 KRTAP4-12Q9BQ66 201 aa5.11□□□□□ -1.59
TRAPPC4-208ENST00000527680 LCE3DQ9BYE3 92 aa4.94□□□□□ -1.62
TRAPPC4-208ENST00000527680 KRTAP5-11Q6L8G4 156 aa4.82□□□□□ -1.64
TRAPPC4-208ENST00000527680 LCE1FQ5T754 118 aa4.78□□□□□ -1.64
TRAPPC4-208ENST00000527680 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC4-208ENST00000527680 H3BS24 57 aa4.74□□□□□ -1.65
TRAPPC4-208ENST00000527680 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
TRAPPC4-208ENST00000527680 NDUFAF8A1L188 74 aa4.68□□□□□ -1.66
TRAPPC4-208ENST00000527680 LCE3EQ5T5B0 92 aa4.59□□□□□ -1.67
TRAPPC4-208ENST00000527680 PHGR1C9JFL3 82 aa4.48□□□□□ -1.69
TRAPPC4-208ENST00000527680 KRTAP21-2Q3LI59 83 aa4.41□□□□□ -1.7
TRAPPC4-208ENST00000527680 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
TRAPPC4-208ENST00000527680 KRTAP4-4Q9BYR3 166 aa4.16□□□□□ -1.74
TRAPPC4-208ENST00000527680 INE1O15225 51 aa4.01□□□□□ -1.77
TRAPPC4-208ENST00000527680 MUC19Q7Z5P9 8384 aa4.01□□□□□ -1.77
TRAPPC4-208ENST00000527680 KRTAP21-1Q3LI58 79 aa3.39□□□□□ -1.87
TRAPPC4-208ENST00000527680 PRM1P04553 51 aa3.28□□□□□ -1.88
TRAPPC4-208ENST00000527680 MUC16Q8WXI7 14507 aa2.77□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 154.9 ms