RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 KRTAP2-4Q9BYR9 128 aa2.69□□□□□ -1.98
SOX6-208ENST00000527619 KRTAP2-1Q9BYU5 128 aa2.69□□□□□ -1.98
SOX6-208ENST00000527619 KRTAP6-3Q3LI67 103 aa2.67□□□□□ -1.98
SOX6-208ENST00000527619 KRTAP19-5Q3LI72 72 aa2.66□□□□□ -1.98
SOX6-208ENST00000527619 KRTAP9-6A8MVA2 160 aa2.65□□□□□ -1.99
SOX6-208ENST00000527619 CRCT1Q9UGL9 99 aa2.65□□□□□ -1.99
SOX6-208ENST00000527619 USH2AO75445 5202 aa2.63□□□□□ -1.99
SOX6-208ENST00000527619 SSPOA2VEC9 5147 aa2.58□□□□□ -2
SOX6-208ENST00000527619 KRTAP19-6Q3LI70 58 aa2.53□□□□□ -2
SOX6-208ENST00000527619 LOC100996750A0A140TA64 210 aa2.51□□□□□ -2.01
SOX6-208ENST00000527619 MT3P25713 68 aa2.51□□□□□ -2.01
SOX6-208ENST00000527619 KRTAP4-6Q9BYQ5 205 aa2.51□□□□□ -2.01
SOX6-208ENST00000527619 FCGBPQ9Y6R7 5405 aaPredicted RBP2.51□□□□□ -2.01
SOX6-208ENST00000527619 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
SOX6-208ENST00000527619 KRTAP4-7Q9BYR0 210 aa2.5□□□□□ -2.01
SOX6-208ENST00000527619 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
SOX6-208ENST00000527619 KMT2DO14686 5537 aa2.49□□□□□ -2.01
SOX6-208ENST00000527619 KRTAP4-8A0A0G2JLE6 195 aa2.46□□□□□ -2.02
SOX6-208ENST00000527619 KRTAP4-8Q9BYQ9 185 aa2.46□□□□□ -2.02
SOX6-208ENST00000527619 KRTAP19-7Q3SYF9 63 aa2.45□□□□□ -2.02
SOX6-208ENST00000527619 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.45□□□□□ -2.02
SOX6-208ENST00000527619 MT1LQ93083 61 aa2.41□□□□□ -2.02
SOX6-208ENST00000527619 MACF1Q9UPN3 7388 aaKnown RBP2.4□□□□□ -2.02
SOX6-208ENST00000527619 SYNE2Q8WXH0 6885 aaKnown RBP2.37□□□□□ -2.03
SOX6-208ENST00000527619 MT1EP04732 61 aa2.36□□□□□ -2.03
SOX6-208ENST00000527619 PRM1P04553 51 aa2.28□□□□□ -2.04
SOX6-208ENST00000527619 MT1GP13640 62 aa2.28□□□□□ -2.04
SOX6-208ENST00000527619 KRTAP5-9P26371 169 aa2.26□□□□□ -2.05
SOX6-208ENST00000527619 SPRR2FQ96RM1 72 aa2.25□□□□□ -2.05
SOX6-208ENST00000527619 KRTAP4-3Q9BYR4 195 aa2.25□□□□□ -2.05
SOX6-208ENST00000527619 MUC12Q9UKN1 5478 aa2.23□□□□□ -2.05
SOX6-208ENST00000527619 KRTAP4-12Q9BQ66 201 aa2.23□□□□□ -2.05
SOX6-208ENST00000527619 MT1AP04731 61 aa2.2□□□□□ -2.06
SOX6-208ENST00000527619 MDN1Q9NU22 5596 aa2.2□□□□□ -2.06
SOX6-208ENST00000527619 SPRR2EP22531 72 aa2.19□□□□□ -2.06
SOX6-208ENST00000527619 SPRR2BP35325 72 aa2.19□□□□□ -2.06
SOX6-208ENST00000527619 SPRR2AP35326 72 aa2.19□□□□□ -2.06
SOX6-208ENST00000527619 LCE3BQ5TA77 95 aa2.19□□□□□ -2.06
SOX6-208ENST00000527619 MT1MQ8N339 61 aa2.19□□□□□ -2.06
SOX6-208ENST00000527619 KRTAP4-9Q9BYQ8 210 aa2.19□□□□□ -2.06
SOX6-208ENST00000527619 NEBP20929 6669 aa2.18□□□□□ -2.06
SOX6-208ENST00000527619 KRTAP5-5Q701N2 237 aaPredicted RBP2.17□□□□□ -2.06
SOX6-208ENST00000527619 KRTAP19-3Q7Z4W3 81 aa2.14□□□□□ -2.07
SOX6-208ENST00000527619 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
SOX6-208ENST00000527619 SYNE1Q8NF91 8797 aaKnown RBP2.12□□□□□ -2.07
SOX6-208ENST00000527619 SPRR2DP22532 72 aa2.11□□□□□ -2.07
SOX6-208ENST00000527619 KRTAP20-1Q3LI63 56 aa2.11□□□□□ -2.07
SOX6-208ENST00000527619 KRTAP6-1Q3LI64 71 aa2.05□□□□□ -2.08
SOX6-208ENST00000527619 KRTAP6-2Q3LI66 62 aa2.04□□□□□ -2.08
SOX6-208ENST00000527619 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
SOX6-208ENST00000527619 DSTQ03001 7570 aaKnown RBP2.03□□□□□ -2.09
SOX6-208ENST00000527619 KRTAP4-2Q9BYR5 136 aa1.96□□□□□ -2.1
SOX6-208ENST00000527619 KRTAP4-11Q9BYQ6 195 aa1.91□□□□□ -2.1
SOX6-208ENST00000527619 MT4P47944 62 aa1.84□□□□□ -2.11
SOX6-208ENST00000527619 KRTAP5-4Q6L8H1 288 aa1.84□□□□□ -2.11
SOX6-208ENST00000527619 KRTAP5-3Q6L8H2 238 aa1.81□□□□□ -2.12
SOX6-208ENST00000527619 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
SOX6-208ENST00000527619 LCE1BQ5T7P3 118 aa1.8□□□□□ -2.12
SOX6-208ENST00000527619 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
SOX6-208ENST00000527619 GPR98Q8WXG9 6306 aa1.75□□□□□ -2.13
SOX6-208ENST00000527619 KRTAP20-2Q3LI61 65 aa1.74□□□□□ -2.13
SOX6-208ENST00000527619 AHNAK2Q8IVF2 5795 aa1.67□□□□□ -2.14
SOX6-208ENST00000527619 KRTAP5-10Q6L8G5 202 aa1.64□□□□□ -2.15
SOX6-208ENST00000527619 KRTAP5-2Q701N4 177 aa1.63□□□□□ -2.15
SOX6-208ENST00000527619 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
SOX6-208ENST00000527619 MUC5ACP98088 5654 aa1.59□□□□□ -2.15
SOX6-208ENST00000527619 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
SOX6-208ENST00000527619 KRTAP5-8O75690 187 aa1.5□□□□□ -2.17
SOX6-208ENST00000527619 KRTAP5-1Q6L8H4 278 aa1.47□□□□□ -2.17
SOX6-208ENST00000527619 AHNAKQ09666 5890 aaKnown RBP1.39□□□□□ -2.19
SOX6-208ENST00000527619 MUC5BQ9HC84 5762 aaPredicted RBP1.37□□□□□ -2.19
SOX6-208ENST00000527619 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.32□□□□□ -2.2
SOX6-208ENST00000527619 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
SOX6-208ENST00000527619 KRTAP5-11Q6L8G4 156 aa1.29□□□□□ -2.2
SOX6-208ENST00000527619 KRTAP4-4Q9BYR3 166 aa1.2□□□□□ -2.22
SOX6-208ENST00000527619 PHGR1C9JFL3 82 aa1.02□□□□□ -2.25
SOX6-208ENST00000527619 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 10.4 ms