RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 KRTAP19-6Q3LI70 58 aa3.91□□□□□ -1.78
CLNS1A-204ENST00000525428 MACF1Q9UPN3 7388 aaKnown RBP3.89□□□□□ -1.79
CLNS1A-204ENST00000525428 SYNE2Q8WXH0 6885 aaKnown RBP3.87□□□□□ -1.79
CLNS1A-204ENST00000525428 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.86□□□□□ -1.79
CLNS1A-204ENST00000525428 KRTAP9-6A0A140TA67 174 aa3.84□□□□□ -1.79
CLNS1A-204ENST00000525428 CRCT1Q9UGL9 99 aa3.84□□□□□ -1.8
CLNS1A-204ENST00000525428 MUC12Q9UKN1 5478 aa3.82□□□□□ -1.8
CLNS1A-204ENST00000525428 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
CLNS1A-204ENST00000525428 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
CLNS1A-204ENST00000525428 LCE3BQ5TA77 95 aa3.75□□□□□ -1.81
CLNS1A-204ENST00000525428 KRTAP19-7Q3SYF9 63 aa3.73□□□□□ -1.81
CLNS1A-204ENST00000525428 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
CLNS1A-204ENST00000525428 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
CLNS1A-204ENST00000525428 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
CLNS1A-204ENST00000525428 KRTAP9-4Q9BYQ2 154 aa3.67□□□□□ -1.82
CLNS1A-204ENST00000525428 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
CLNS1A-204ENST00000525428 MT1LQ93083 61 aa3.64□□□□□ -1.83
CLNS1A-204ENST00000525428 SYNE1Q8NF91 8797 aaKnown RBP3.62□□□□□ -1.83
CLNS1A-204ENST00000525428 SPRR2FQ96RM1 72 aa3.62□□□□□ -1.83
CLNS1A-204ENST00000525428 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
CLNS1A-204ENST00000525428 MT1EP04732 61 aa3.59□□□□□ -1.83
CLNS1A-204ENST00000525428 MT1GP13640 62 aa3.58□□□□□ -1.84
CLNS1A-204ENST00000525428 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
CLNS1A-204ENST00000525428 KRTAP4-9Q9BYQ8 210 aa3.52□□□□□ -1.85
CLNS1A-204ENST00000525428 KRTAP19-4Q3LI73 84 aa3.48□□□□□ -1.85
CLNS1A-204ENST00000525428 KRTAP19-3Q7Z4W3 81 aa3.44□□□□□ -1.86
CLNS1A-204ENST00000525428 KRTAP9-7A8MTY7 169 aa3.42□□□□□ -1.86
CLNS1A-204ENST00000525428 KRTAP5-9P26371 169 aa3.42□□□□□ -1.86
CLNS1A-204ENST00000525428 PRM1P04553 51 aa3.4□□□□□ -1.86
CLNS1A-204ENST00000525428 LCE1AQ5T7P2 110 aa3.4□□□□□ -1.86
CLNS1A-204ENST00000525428 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.86
CLNS1A-204ENST00000525428 SPRR2EP22531 72 aa3.4□□□□□ -1.87
CLNS1A-204ENST00000525428 SPRR2BP35325 72 aa3.4□□□□□ -1.87
CLNS1A-204ENST00000525428 SPRR2AP35326 72 aa3.4□□□□□ -1.87
CLNS1A-204ENST00000525428 MT1MQ8N339 61 aa3.39□□□□□ -1.87
CLNS1A-204ENST00000525428 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
CLNS1A-204ENST00000525428 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
CLNS1A-204ENST00000525428 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
CLNS1A-204ENST00000525428 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
CLNS1A-204ENST00000525428 NEBP20929 6669 aa3.28□□□□□ -1.88
CLNS1A-204ENST00000525428 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
CLNS1A-204ENST00000525428 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
CLNS1A-204ENST00000525428 SPRR2DP22532 72 aa3.25□□□□□ -1.89
CLNS1A-204ENST00000525428 MT1AP04731 61 aa3.18□□□□□ -1.9
CLNS1A-204ENST00000525428 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
CLNS1A-204ENST00000525428 KRTAP6-1Q3LI64 71 aa3.16□□□□□ -1.9
CLNS1A-204ENST00000525428 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
CLNS1A-204ENST00000525428 LCE4AQ5TA78 99 aa3.1□□□□□ -1.91
CLNS1A-204ENST00000525428 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
CLNS1A-204ENST00000525428 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
CLNS1A-204ENST00000525428 MT4P47944 62 aa2.94□□□□□ -1.94
CLNS1A-204ENST00000525428 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
CLNS1A-204ENST00000525428 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
CLNS1A-204ENST00000525428 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.96
CLNS1A-204ENST00000525428 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
CLNS1A-204ENST00000525428 MT3P25713 68 aa2.69□□□□□ -1.98
CLNS1A-204ENST00000525428 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
CLNS1A-204ENST00000525428 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
CLNS1A-204ENST00000525428 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
CLNS1A-204ENST00000525428 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
CLNS1A-204ENST00000525428 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
CLNS1A-204ENST00000525428 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
CLNS1A-204ENST00000525428 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.04
CLNS1A-204ENST00000525428 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
CLNS1A-204ENST00000525428 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
CLNS1A-204ENST00000525428 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
CLNS1A-204ENST00000525428 KRTAP5-8O75690 187 aa2.28□□□□□ -2.05
CLNS1A-204ENST00000525428 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
CLNS1A-204ENST00000525428 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
CLNS1A-204ENST00000525428 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
CLNS1A-204ENST00000525428 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
CLNS1A-204ENST00000525428 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
CLNS1A-204ENST00000525428 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.08
CLNS1A-204ENST00000525428 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
CLNS1A-204ENST00000525428 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
CLNS1A-204ENST00000525428 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
CLNS1A-204ENST00000525428 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms