RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 MT1EP04732 61 aa4.24□□□□□ -1.73
CTTN-209ENST00000525276 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
CTTN-209ENST00000525276 KRTAP4-6Q9BYQ5 205 aa4.22□□□□□ -1.73
CTTN-209ENST00000525276 KRTAP19-5Q3LI72 72 aa4.21□□□□□ -1.74
CTTN-209ENST00000525276 PCP4P48539 62 aa4.19□□□□□ -1.74
CTTN-209ENST00000525276 K7ERS5 55 aa4.18□□□□□ -1.74
CTTN-209ENST00000525276 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
CTTN-209ENST00000525276 KRTAP19-3Q7Z4W3 81 aa4.18□□□□□ -1.74
CTTN-209ENST00000525276 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
CTTN-209ENST00000525276 RPS28P62857 69 aaKnown RBP4.14□□□□□ -1.75
CTTN-209ENST00000525276 A6NED7 52 aa4.12□□□□□ -1.75
CTTN-209ENST00000525276 MT4P47944 62 aa4.12□□□□□ -1.75
CTTN-209ENST00000525276 MT1GP13640 62 aa4.1□□□□□ -1.75
CTTN-209ENST00000525276 KRTAP25-1Q3LHN0 102 aa4.09□□□□□ -1.75
CTTN-209ENST00000525276 LCE4AQ5TA78 99 aa4.09□□□□□ -1.75
CTTN-209ENST00000525276 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
CTTN-209ENST00000525276 MT1LQ93083 61 aa4.07□□□□□ -1.76
CTTN-209ENST00000525276 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
CTTN-209ENST00000525276 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.76
CTTN-209ENST00000525276 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
CTTN-209ENST00000525276 MT1MQ8N339 61 aa4.03□□□□□ -1.76
CTTN-209ENST00000525276 CDC42SE1Q9NRR8 79 aa3.96□□□□□ -1.78
CTTN-209ENST00000525276 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
CTTN-209ENST00000525276 KRTAP23-1A1A580 65 aa3.94□□□□□ -1.78
CTTN-209ENST00000525276 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
CTTN-209ENST00000525276 ROMO1P60602 79 aa3.9□□□□□ -1.79
CTTN-209ENST00000525276 KRTAP4-7Q9BYR0 210 aa3.87□□□□□ -1.79
CTTN-209ENST00000525276 KRTAP19-4Q3LI73 84 aa3.83□□□□□ -1.8
CTTN-209ENST00000525276 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
CTTN-209ENST00000525276 KRTAP15-1Q3LI76 137 aa3.81□□□□□ -1.8
CTTN-209ENST00000525276 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
CTTN-209ENST00000525276 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
CTTN-209ENST00000525276 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
CTTN-209ENST00000525276 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
CTTN-209ENST00000525276 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
CTTN-209ENST00000525276 BRK1Q8WUW1 75 aa3.66□□□□□ -1.82
CTTN-209ENST00000525276 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
CTTN-209ENST00000525276 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
CTTN-209ENST00000525276 AHNAKQ09666 5890 aaKnown RBP3.64□□□□□ -1.83
CTTN-209ENST00000525276 MUC5BQ9HC84 5762 aaPredicted RBP3.62□□□□□ -1.83
CTTN-209ENST00000525276 H3BS24 57 aa3.58□□□□□ -1.84
CTTN-209ENST00000525276 KRTAP12-4P60329 112 aa3.58□□□□□ -1.84
CTTN-209ENST00000525276 MUC5ACP98088 5654 aa3.58□□□□□ -1.84
CTTN-209ENST00000525276 KRTAP4-11Q9BYQ6 195 aa3.55□□□□□ -1.84
CTTN-209ENST00000525276 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
CTTN-209ENST00000525276 MT1AP04731 61 aa3.48□□□□□ -1.85
CTTN-209ENST00000525276 KRTAP5-8O75690 187 aa3.47□□□□□ -1.85
CTTN-209ENST00000525276 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
CTTN-209ENST00000525276 PMAIP1Q13794 54 aa3.44□□□□□ -1.86
CTTN-209ENST00000525276 KRTAP6-1Q3LI64 71 aa3.44□□□□□ -1.86
CTTN-209ENST00000525276 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
CTTN-209ENST00000525276 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
CTTN-209ENST00000525276 PRAC1Q96KF2 57 aa3.28□□□□□ -1.88
CTTN-209ENST00000525276 PRO0628Q9UI54 55 aa3.28□□□□□ -1.88
CTTN-209ENST00000525276 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
CTTN-209ENST00000525276 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
CTTN-209ENST00000525276 MT3P25713 68 aa3.18□□□□□ -1.9
CTTN-209ENST00000525276 KTN1-AS1Q86SY8 53 aa3.12□□□□□ -1.91
CTTN-209ENST00000525276 SVIPQ8NHG7 77 aa2.99□□□□□ -1.93
CTTN-209ENST00000525276 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
CTTN-209ENST00000525276 LUZP6Q538Z0 58 aa2.79□□□□□ -1.96
CTTN-209ENST00000525276 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
CTTN-209ENST00000525276 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
CTTN-209ENST00000525276 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
CTTN-209ENST00000525276 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
CTTN-209ENST00000525276 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
CTTN-209ENST00000525276 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
CTTN-209ENST00000525276 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
CTTN-209ENST00000525276 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
CTTN-209ENST00000525276 NDUFAF8A1L188 74 aa2.31□□□□□ -2.04
CTTN-209ENST00000525276 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
CTTN-209ENST00000525276 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
CTTN-209ENST00000525276 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
CTTN-209ENST00000525276 A0A0A0MQY5 61 aa2.06□□□□□ -2.08
CTTN-209ENST00000525276 PRM1P04553 51 aa1.99□□□□□ -2.09
CTTN-209ENST00000525276 INE1O15225 51 aa1.89□□□□□ -2.11
CTTN-209ENST00000525276 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
CTTN-209ENST00000525276 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 144.1 ms