RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 KRTAP12-1P59990 96 aa3.49□□□□□ -1.85
SF3B2-204ENST00000525207 SPINT4Q6UDR6 99 aa3.48□□□□□ -1.85
SF3B2-204ENST00000525207 ATP5EP56381 51 aaPredicted RBP3.46□□□□□ -1.86
SF3B2-204ENST00000525207 TMEM258P61165 79 aa3.46□□□□□ -1.86
SF3B2-204ENST00000525207 KRTAP19-5Q3LI72 72 aa3.44□□□□□ -1.86
SF3B2-204ENST00000525207 A0A1B0GU69 56 aa3.43□□□□□ -1.86
SF3B2-204ENST00000525207 SMIM26A0A096LP01 95 aa3.4□□□□□ -1.87
SF3B2-204ENST00000525207 MT1GP13640 62 aa3.4□□□□□ -1.87
SF3B2-204ENST00000525207 PP632Q6XCG6 107 aa3.39□□□□□ -1.87
SF3B2-204ENST00000525207 A8MU10 97 aa3.38□□□□□ -1.87
SF3B2-204ENST00000525207 MT1MQ8N339 61 aa3.37□□□□□ -1.87
SF3B2-204ENST00000525207 MT1LQ93083 61 aa3.37□□□□□ -1.87
SF3B2-204ENST00000525207 LINC01558Q9Y6Z2 57 aa3.37□□□□□ -1.87
SF3B2-204ENST00000525207 MT3P25713 68 aa3.36□□□□□ -1.87
SF3B2-204ENST00000525207 LCE3AQ5TA76 89 aa3.35□□□□□ -1.87
SF3B2-204ENST00000525207 C10orf95Q9H7T3 257 aa3.34□□□□□ -1.87
SF3B2-204ENST00000525207 TNP1P09430 55 aa3.33□□□□□ -1.88
SF3B2-204ENST00000525207 PRR15LQ9BU68 103 aa3.33□□□□□ -1.88
SF3B2-204ENST00000525207 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
SF3B2-204ENST00000525207 PSPHP1O15172 72 aa3.27□□□□□ -1.89
SF3B2-204ENST00000525207 MT4P47944 62 aa3.27□□□□□ -1.89
SF3B2-204ENST00000525207 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
SF3B2-204ENST00000525207 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
SF3B2-204ENST00000525207 UQCR11O14957 56 aa3.24□□□□□ -1.89
SF3B2-204ENST00000525207 Q1T7F1 81 aa3.24□□□□□ -1.89
SF3B2-204ENST00000525207 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
SF3B2-204ENST00000525207 KRTAP12-3P60328 96 aa3.21□□□□□ -1.9
SF3B2-204ENST00000525207 V9GYY9 64 aa3.21□□□□□ -1.9
SF3B2-204ENST00000525207 MIR22HGQ0VDD5 57 aa3.2□□□□□ -1.9
SF3B2-204ENST00000525207 RPS28P62857 69 aaKnown RBP3.18□□□□□ -1.9
SF3B2-204ENST00000525207 PRAC1Q96KF2 57 aa3.15□□□□□ -1.91
SF3B2-204ENST00000525207 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
SF3B2-204ENST00000525207 A6NED7 52 aa3.13□□□□□ -1.91
SF3B2-204ENST00000525207 KRTAP5-10Q6L8G5 202 aa3.13□□□□□ -1.91
SF3B2-204ENST00000525207 KRTAP25-1Q3LHN0 102 aa3.12□□□□□ -1.91
SF3B2-204ENST00000525207 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
SF3B2-204ENST00000525207 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
SF3B2-204ENST00000525207 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
SF3B2-204ENST00000525207 K7ERS5 55 aa3.09□□□□□ -1.91
SF3B2-204ENST00000525207 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
SF3B2-204ENST00000525207 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
SF3B2-204ENST00000525207 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
SF3B2-204ENST00000525207 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
SF3B2-204ENST00000525207 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
SF3B2-204ENST00000525207 KRTAP5-7Q6L8G8 165 aa3.01□□□□□ -1.93
SF3B2-204ENST00000525207 SYNE1Q8NF91 8797 aaKnown RBP3.01□□□□□ -1.93
SF3B2-204ENST00000525207 KRTAP12-4P60329 112 aa3□□□□□ -1.93
SF3B2-204ENST00000525207 CDC42SE1Q9NRR8 79 aa3□□□□□ -1.93
SF3B2-204ENST00000525207 LCE3CQ5T5A8 94 aa2.94□□□□□ -1.94
SF3B2-204ENST00000525207 ROMO1P60602 79 aa2.92□□□□□ -1.94
SF3B2-204ENST00000525207 MT1AP04731 61 aa2.87□□□□□ -1.95
SF3B2-204ENST00000525207 BRK1Q8WUW1 75 aa2.87□□□□□ -1.95
SF3B2-204ENST00000525207 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
SF3B2-204ENST00000525207 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
SF3B2-204ENST00000525207 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
SF3B2-204ENST00000525207 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
SF3B2-204ENST00000525207 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
SF3B2-204ENST00000525207 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
SF3B2-204ENST00000525207 PMAIP1Q13794 54 aa2.69□□□□□ -1.98
SF3B2-204ENST00000525207 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
SF3B2-204ENST00000525207 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
SF3B2-204ENST00000525207 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
SF3B2-204ENST00000525207 PRO0628Q9UI54 55 aa2.59□□□□□ -1.99
SF3B2-204ENST00000525207 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
SF3B2-204ENST00000525207 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
SF3B2-204ENST00000525207 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
SF3B2-204ENST00000525207 KTN1-AS1Q86SY8 53 aa2.45□□□□□ -2.02
SF3B2-204ENST00000525207 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
SF3B2-204ENST00000525207 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
SF3B2-204ENST00000525207 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
SF3B2-204ENST00000525207 LUZP6Q538Z0 58 aa2.16□□□□□ -2.06
SF3B2-204ENST00000525207 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
SF3B2-204ENST00000525207 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
SF3B2-204ENST00000525207 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
SF3B2-204ENST00000525207 PRM1P04553 51 aa1.53□□□□□ -2.16
SF3B2-204ENST00000525207 INE1O15225 51 aa1.5□□□□□ -2.17
SF3B2-204ENST00000525207 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
SF3B2-204ENST00000525207 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms