RNA–Protein interactions for RNA: ENST00000524792.5

ATM-204, Transcript of ATM serine/threonine kinase, humanhuman

TSL 2

Gene ATM, Length 5,912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-204ENST00000524792 KRTAP9-8Q9BYQ0 159 aa1.43□□□□□ -2.18
ATM-204ENST00000524792 PKHD1P08F94 4074 aa1.42□□□□□ -2.18
ATM-204ENST00000524792 LRP2P98164 4655 aa1.42□□□□□ -2.18
ATM-204ENST00000524792 NEBP20929 6669 aa1.42□□□□□ -2.18
ATM-204ENST00000524792 FSIP2Q5CZC0 6907 aa1.41□□□□□ -2.18
ATM-204ENST00000524792 HSPG2P98160 4391 aa1.41□□□□□ -2.18
ATM-204ENST00000524792 VPS13BQ7Z7G8 4022 aa1.4□□□□□ -2.19
ATM-204ENST00000524792 KRTAP4-9Q9BYQ8 210 aa1.39□□□□□ -2.19
ATM-204ENST00000524792 MT1GP13640 62 aa1.39□□□□□ -2.19
ATM-204ENST00000524792 LRP1Q07954 4544 aaKnown RBP1.39□□□□□ -2.19
ATM-204ENST00000524792 LCE1AQ5T7P2 110 aa1.38□□□□□ -2.19
ATM-204ENST00000524792 RNF213Q63HN8 5207 aa1.38□□□□□ -2.19
ATM-204ENST00000524792 KRTAP19-8Q3LI54 63 aa1.38□□□□□ -2.19
ATM-204ENST00000524792 LCE1EQ5T753 118 aa1.38□□□□□ -2.19
ATM-204ENST00000524792 KRTAP4-8Q9BYQ9 185 aa1.36□□□□□ -2.19
ATM-204ENST00000524792 LCE3AQ5TA76 89 aa1.36□□□□□ -2.19
ATM-204ENST00000524792 HMCN2Q8NDA2 5059 aa1.36□□□□□ -2.19
ATM-204ENST00000524792 KRTAP19-5Q3LI72 72 aa1.34□□□□□ -2.19
ATM-204ENST00000524792 TNXBP22105 4242 aa1.34□□□□□ -2.2
ATM-204ENST00000524792 KRTAP19-3Q7Z4W3 81 aa1.34□□□□□ -2.2
ATM-204ENST00000524792 KRTAP4-12Q9BQ66 201 aa1.34□□□□□ -2.2
ATM-204ENST00000524792 DSTQ03001 7570 aaKnown RBP1.33□□□□□ -2.2
ATM-204ENST00000524792 MT1BP07438 61 aa1.32□□□□□ -2.2
ATM-204ENST00000524792 USH2AO75445 5202 aa1.3□□□□□ -2.2
ATM-204ENST00000524792 KMT2DO14686 5537 aa1.29□□□□□ -2.2
ATM-204ENST00000524792 KRTAP4-8A0A0G2JLE6 195 aa1.29□□□□□ -2.2
ATM-204ENST00000524792 KRTAP4-7Q9BYR0 210 aa1.29□□□□□ -2.2
ATM-204ENST00000524792 FAT4Q6V0I7 4981 aa1.28□□□□□ -2.2
ATM-204ENST00000524792 LCE1CQ5T751 118 aa1.28□□□□□ -2.2
ATM-204ENST00000524792 LCE1DQ5T752 114 aa1.28□□□□□ -2.21
ATM-204ENST00000524792 SYNE1Q8NF91 8797 aaKnown RBP1.28□□□□□ -2.21
ATM-204ENST00000524792 LCE1BQ5T7P3 118 aa1.27□□□□□ -2.21
ATM-204ENST00000524792 MUC2Q02817 5179 aa1.26□□□□□ -2.21
ATM-204ENST00000524792 MT1XP80297 61 aa1.26□□□□□ -2.21
ATM-204ENST00000524792 KRTAP19-2Q3LHN2 52 aa1.26□□□□□ -2.21
ATM-204ENST00000524792 MDN1Q9NU22 5596 aa1.26□□□□□ -2.21
ATM-204ENST00000524792 MUC19Q7Z5P9 8384 aa1.26□□□□□ -2.21
ATM-204ENST00000524792 KRTAP4-2Q9BYR5 136 aa1.25□□□□□ -2.21
ATM-204ENST00000524792 MUC17Q685J3 4493 aa1.25□□□□□ -2.21
ATM-204ENST00000524792 OBSCNQ5VST9 7968 aa1.23□□□□□ -2.21
ATM-204ENST00000524792 SSPOA2VEC9 5147 aa1.23□□□□□ -2.21
ATM-204ENST00000524792 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
ATM-204ENST00000524792 LPAP08519 4548 aa1.22□□□□□ -2.21
ATM-204ENST00000524792 FLGP20930 4061 aaPredicted RBP1.2□□□□□ -2.22
ATM-204ENST00000524792 MT1MQ8N339 61 aa1.2□□□□□ -2.22
ATM-204ENST00000524792 MT1EP04732 61 aa1.19□□□□□ -2.22
ATM-204ENST00000524792 KRTAP5-9P26371 169 aa1.19□□□□□ -2.22
ATM-204ENST00000524792 KRTAP5-3Q6L8H2 238 aa1.18□□□□□ -2.22
ATM-204ENST00000524792 HMCN1Q96RW7 5635 aa1.18□□□□□ -2.22
ATM-204ENST00000524792 AHNAKQ09666 5890 aaKnown RBP1.17□□□□□ -2.22
ATM-204ENST00000524792 FCGBPQ9Y6R7 5405 aaPredicted RBP1.17□□□□□ -2.22
ATM-204ENST00000524792 MT1LQ93083 61 aa1.15□□□□□ -2.23
ATM-204ENST00000524792 KRTAP4-11Q9BYQ6 195 aa1.12□□□□□ -2.23
ATM-204ENST00000524792 MT1AP04731 61 aa1.09□□□□□ -2.24
ATM-204ENST00000524792 KRTAP5-2Q701N4 177 aa1.08□□□□□ -2.24
ATM-204ENST00000524792 KRTAP4-3Q9BYR4 195 aa1.07□□□□□ -2.24
ATM-204ENST00000524792 PRM1P04553 51 aa1.07□□□□□ -2.24
ATM-204ENST00000524792 KRTAP19-7Q3SYF9 63 aa1.06□□□□□ -2.24
ATM-204ENST00000524792 KRTAP20-2Q3LI61 65 aa1.05□□□□□ -2.24
ATM-204ENST00000524792 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.05□□□□□ -2.24
ATM-204ENST00000524792 KRTAP5-4Q6L8H1 288 aa1.04□□□□□ -2.24
ATM-204ENST00000524792 KRTAP6-2Q3LI66 62 aa1.04□□□□□ -2.24
ATM-204ENST00000524792 MUC5BQ9HC84 5762 aaPredicted RBP1.04□□□□□ -2.24
ATM-204ENST00000524792 KRTAP6-1Q3LI64 71 aa0.99□□□□□ -2.25
ATM-204ENST00000524792 KRTAP5-7Q6L8G8 165 aa0.97□□□□□ -2.25
ATM-204ENST00000524792 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
ATM-204ENST00000524792 MUC5ACP98088 5654 aa0.92□□□□□ -2.26
ATM-204ENST00000524792 KRTAP5-8O75690 187 aa0.92□□□□□ -2.26
ATM-204ENST00000524792 KRTAP5-10Q6L8G5 202 aa0.91□□□□□ -2.26
ATM-204ENST00000524792 MUC12Q9UKN1 5478 aa0.91□□□□□ -2.26
ATM-204ENST00000524792 KRTAP9-6A8MVA2 160 aa0.9□□□□□ -2.26
ATM-204ENST00000524792 KRTAP5-5Q701N2 237 aaPredicted RBP0.9□□□□□ -2.27
ATM-204ENST00000524792 KRTAP5-11Q6L8G4 156 aa0.87□□□□□ -2.27
ATM-204ENST00000524792 KRTAP4-4Q9BYR3 166 aa0.82□□□□□ -2.28
ATM-204ENST00000524792 KRTAP5-1Q6L8H4 278 aa0.78□□□□□ -2.28
ATM-204ENST00000524792 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
ATM-204ENST00000524792 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
ATM-204ENST00000524792 KRTAP21-2Q3LI59 83 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 241.2 ms