RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 P0C880 135 aa1.28□□□□□ -2.2
CSDE1-208ENST00000524652 ACYP2P14621 99 aa1.28□□□□□ -2.2
CSDE1-208ENST00000524652 H0YAA0 97 aa1.27□□□□□ -2.21
CSDE1-208ENST00000524652 MT1BP07438 61 aa1.27□□□□□ -2.21
CSDE1-208ENST00000524652 KRTAP12-3P60328 96 aa1.27□□□□□ -2.21
CSDE1-208ENST00000524652 ADM2Q7Z4H4 148 aa1.27□□□□□ -2.21
CSDE1-208ENST00000524652 COA5Q86WW8 74 aa1.27□□□□□ -2.21
CSDE1-208ENST00000524652 SPRR2GQ9BYE4 73 aa1.27□□□□□ -2.21
CSDE1-208ENST00000524652 KRTAP19-8Q3LI54 63 aa1.26□□□□□ -2.21
CSDE1-208ENST00000524652 KRTAP13-4Q3LI77 160 aa1.25□□□□□ -2.21
CSDE1-208ENST00000524652 CHKB-CPT1BH3BT56 60 aa1.24□□□□□ -2.21
CSDE1-208ENST00000524652 KRTAP19-6Q3LI70 58 aa1.24□□□□□ -2.21
CSDE1-208ENST00000524652 TMEM258P61165 79 aa1.23□□□□□ -2.21
CSDE1-208ENST00000524652 CRIPTQ9P021 101 aa1.23□□□□□ -2.21
CSDE1-208ENST00000524652 M0QZ58 72 aa1.22□□□□□ -2.21
CSDE1-208ENST00000524652 ATP5EP56381 51 aaPredicted RBP1.22□□□□□ -2.21
CSDE1-208ENST00000524652 Q5VV11 94 aa1.22□□□□□ -2.21
CSDE1-208ENST00000524652 MT1XP80297 61 aa1.21□□□□□ -2.22
CSDE1-208ENST00000524652 SPTSSBQ8NFR3 76 aa1.21□□□□□ -2.22
CSDE1-208ENST00000524652 R4GN34 69 aa1.21□□□□□ -2.22
CSDE1-208ENST00000524652 SPATA8Q6RVD6 105 aa1.2□□□□□ -2.22
CSDE1-208ENST00000524652 CAMK2N1Q7Z7J9 78 aa1.2□□□□□ -2.22
CSDE1-208ENST00000524652 LINC01554Q52M75 96 aa1.19□□□□□ -2.22
CSDE1-208ENST00000524652 SERP1Q9Y6X1 66 aa1.19□□□□□ -2.22
CSDE1-208ENST00000524652 LINC01558Q9Y6Z2 57 aa1.19□□□□□ -2.22
CSDE1-208ENST00000524652 A0A1B0GU69 56 aa1.18□□□□□ -2.22
CSDE1-208ENST00000524652 A0A1B0GU33 70 aa1.17□□□□□ -2.22
CSDE1-208ENST00000524652 A6NN06 94 aa1.17□□□□□ -2.22
CSDE1-208ENST00000524652 KRTAP12-1P59990 96 aa1.17□□□□□ -2.22
CSDE1-208ENST00000524652 A0A0D9SG42 100 aa1.16□□□□□ -2.22
CSDE1-208ENST00000524652 SEC61GP60059 68 aa1.16□□□□□ -2.22
CSDE1-208ENST00000524652 Q1T7F1 81 aa1.16□□□□□ -2.22
CSDE1-208ENST00000524652 PLAC4Q8WY50 150 aa1.16□□□□□ -2.22
CSDE1-208ENST00000524652 PSPHP1O15172 72 aa1.15□□□□□ -2.23
CSDE1-208ENST00000524652 PRR15LQ9BU68 103 aa1.15□□□□□ -2.23
CSDE1-208ENST00000524652 SMIM26A0A096LP01 95 aa1.14□□□□□ -2.23
CSDE1-208ENST00000524652 RPS28P62857 69 aaKnown RBP1.14□□□□□ -2.23
CSDE1-208ENST00000524652 SPINT4Q6UDR6 99 aa1.13□□□□□ -2.23
CSDE1-208ENST00000524652 UQCR11O14957 56 aa1.12□□□□□ -2.23
CSDE1-208ENST00000524652 C10orf95Q9H7T3 257 aa1.12□□□□□ -2.23
CSDE1-208ENST00000524652 PRO2289Q9P1D8 64 aa1.12□□□□□ -2.23
CSDE1-208ENST00000524652 MIR22HGQ0VDD5 57 aa1.11□□□□□ -2.23
CSDE1-208ENST00000524652 V9GYY9 64 aa1.11□□□□□ -2.23
CSDE1-208ENST00000524652 SPRR2EP22531 72 aa1.1□□□□□ -2.23
CSDE1-208ENST00000524652 SPRR2BP35325 72 aa1.1□□□□□ -2.23
CSDE1-208ENST00000524652 SPRR2AP35326 72 aa1.1□□□□□ -2.23
CSDE1-208ENST00000524652 A6NED7 52 aa1.09□□□□□ -2.23
CSDE1-208ENST00000524652 KRTAP8-1Q8IUC2 63 aa1.09□□□□□ -2.23
CSDE1-208ENST00000524652 KRTAP19-7Q3SYF9 63 aa1.08□□□□□ -2.24
CSDE1-208ENST00000524652 SPRR2FQ96RM1 72 aa1.08□□□□□ -2.24
CSDE1-208ENST00000524652 SPRR2DP22532 72 aa1.07□□□□□ -2.24
CSDE1-208ENST00000524652 CDC42SE1Q9NRR8 79 aa1.07□□□□□ -2.24
CSDE1-208ENST00000524652 MT1EP04732 61 aa1.06□□□□□ -2.24
CSDE1-208ENST00000524652 KRTAP19-5Q3LI72 72 aa1.06□□□□□ -2.24
CSDE1-208ENST00000524652 TNP1P09430 55 aa1.05□□□□□ -2.24
CSDE1-208ENST00000524652 K7ERS5 55 aa1.02□□□□□ -2.25
CSDE1-208ENST00000524652 ROMO1P60602 79 aa1.02□□□□□ -2.25
CSDE1-208ENST00000524652 KRTAP25-1Q3LHN0 102 aa1.02□□□□□ -2.25
CSDE1-208ENST00000524652 KRTAP19-3Q7Z4W3 81 aa1.02□□□□□ -2.25
CSDE1-208ENST00000524652 BRK1Q8WUW1 75 aa1.02□□□□□ -2.25
CSDE1-208ENST00000524652 MT1LQ93083 61 aa1.02□□□□□ -2.25
CSDE1-208ENST00000524652 MT4P47944 62 aa1.01□□□□□ -2.25
CSDE1-208ENST00000524652 MT1MQ8N339 61 aa1□□□□□ -2.25
CSDE1-208ENST00000524652 SYNE1Q8NF91 8797 aaKnown RBP0.99□□□□□ -2.25
CSDE1-208ENST00000524652 MT1GP13640 62 aa0.98□□□□□ -2.25
CSDE1-208ENST00000524652 PMAIP1Q13794 54 aa0.95□□□□□ -2.26
CSDE1-208ENST00000524652 PRO0628Q9UI54 55 aa0.94□□□□□ -2.26
CSDE1-208ENST00000524652 KTN1-AS1Q86SY8 53 aa0.9□□□□□ -2.27
CSDE1-208ENST00000524652 KRTAP6-1Q3LI64 71 aa0.88□□□□□ -2.27
CSDE1-208ENST00000524652 MT1AP04731 61 aa0.86□□□□□ -2.27
CSDE1-208ENST00000524652 KRTAP20-2Q3LI61 65 aa0.86□□□□□ -2.27
CSDE1-208ENST00000524652 KRTAP6-2Q3LI66 62 aa0.8□□□□□ -2.28
CSDE1-208ENST00000524652 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
CSDE1-208ENST00000524652 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
CSDE1-208ENST00000524652 LUZP6Q538Z0 58 aa0.7□□□□□ -2.3
CSDE1-208ENST00000524652 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
CSDE1-208ENST00000524652 PRM1P04553 51 aa0.55□□□□□ -2.32
CSDE1-208ENST00000524652 INE1O15225 51 aa0.52□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms