RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
PABPC1-222ENST00000523555 UQCR11O14957 56 aa3.59□□□□□ -1.83
PABPC1-222ENST00000523555 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
PABPC1-222ENST00000523555 KRTAP2-1Q9BYU5 128 aa3.58□□□□□ -1.84
PABPC1-222ENST00000523555 MT1EP04732 61 aa3.56□□□□□ -1.84
PABPC1-222ENST00000523555 DSTQ03001 7570 aaKnown RBP3.54□□□□□ -1.84
PABPC1-222ENST00000523555 KRTAP4-11Q9BYQ6 195 aa3.53□□□□□ -1.84
PABPC1-222ENST00000523555 PSPHP1O15172 72 aa3.52□□□□□ -1.85
PABPC1-222ENST00000523555 KRTAP19-5Q3LI72 72 aa3.51□□□□□ -1.85
PABPC1-222ENST00000523555 LCE5AQ5TCM9 118 aa3.51□□□□□ -1.85
PABPC1-222ENST00000523555 KRTAP19-3Q7Z4W3 81 aa3.5□□□□□ -1.85
PABPC1-222ENST00000523555 C10orf95Q9H7T3 257 aa3.5□□□□□ -1.85
PABPC1-222ENST00000523555 MIR22HGQ0VDD5 57 aa3.49□□□□□ -1.85
PABPC1-222ENST00000523555 A6NED7 52 aa3.47□□□□□ -1.85
PABPC1-222ENST00000523555 K7ERS5 55 aa3.46□□□□□ -1.86
PABPC1-222ENST00000523555 LCE3AQ5TA76 89 aa3.45□□□□□ -1.86
PABPC1-222ENST00000523555 CDC42SE1Q9NRR8 79 aa3.42□□□□□ -1.86
PABPC1-222ENST00000523555 TNP1P09430 55 aa3.4□□□□□ -1.87
PABPC1-222ENST00000523555 MT1LQ93083 61 aa3.4□□□□□ -1.87
PABPC1-222ENST00000523555 MT1GP13640 62 aa3.39□□□□□ -1.87
PABPC1-222ENST00000523555 MT1MQ8N339 61 aa3.38□□□□□ -1.87
PABPC1-222ENST00000523555 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
PABPC1-222ENST00000523555 PP632Q6XCG6 107 aa3.32□□□□□ -1.88
PABPC1-222ENST00000523555 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
PABPC1-222ENST00000523555 BRK1Q8WUW1 75 aa3.29□□□□□ -1.88
PABPC1-222ENST00000523555 KRTAP12-3P60328 96 aa3.28□□□□□ -1.88
PABPC1-222ENST00000523555 MT4P47944 62 aa3.22□□□□□ -1.89
PABPC1-222ENST00000523555 KRTAP25-1Q3LHN0 102 aa3.22□□□□□ -1.89
PABPC1-222ENST00000523555 PRO0628Q9UI54 55 aa3.22□□□□□ -1.89
PABPC1-222ENST00000523555 KRTAP23-1A1A580 65 aa3.21□□□□□ -1.9
PABPC1-222ENST00000523555 ROMO1P60602 79 aa3.21□□□□□ -1.9
PABPC1-222ENST00000523555 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
PABPC1-222ENST00000523555 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
PABPC1-222ENST00000523555 PMAIP1Q13794 54 aa3.16□□□□□ -1.9
PABPC1-222ENST00000523555 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
PABPC1-222ENST00000523555 AHNAK2Q8IVF2 5795 aa3.09□□□□□ -1.91
PABPC1-222ENST00000523555 KRTAP15-1Q3LI76 137 aa3.08□□□□□ -1.92
PABPC1-222ENST00000523555 SYNE1Q8NF91 8797 aaKnown RBP3.05□□□□□ -1.92
PABPC1-222ENST00000523555 LCE3CQ5T5A8 94 aa3.03□□□□□ -1.92
PABPC1-222ENST00000523555 KRTAP20-2Q3LI61 65 aa3.02□□□□□ -1.93
PABPC1-222ENST00000523555 KRTAP5-10Q6L8G5 202 aa2.99□□□□□ -1.93
PABPC1-222ENST00000523555 KTN1-AS1Q86SY8 53 aa2.98□□□□□ -1.93
PABPC1-222ENST00000523555 SPRR5A0A1B0GTR4 108 aa2.96□□□□□ -1.94
PABPC1-222ENST00000523555 KRTAP12-4P60329 112 aa2.94□□□□□ -1.94
PABPC1-222ENST00000523555 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
PABPC1-222ENST00000523555 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
PABPC1-222ENST00000523555 MT1AP04731 61 aa2.88□□□□□ -1.95
PABPC1-222ENST00000523555 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
PABPC1-222ENST00000523555 PRAC1Q96KF2 57 aa2.83□□□□□ -1.96
PABPC1-222ENST00000523555 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
PABPC1-222ENST00000523555 SVIPQ8NHG7 77 aa2.75□□□□□ -1.97
PABPC1-222ENST00000523555 KRTAP6-2Q3LI66 62 aa2.74□□□□□ -1.97
PABPC1-222ENST00000523555 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
PABPC1-222ENST00000523555 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
PABPC1-222ENST00000523555 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
PABPC1-222ENST00000523555 MT3P25713 68 aa2.6□□□□□ -1.99
PABPC1-222ENST00000523555 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
PABPC1-222ENST00000523555 LUZP6Q538Z0 58 aa2.53□□□□□ -2
PABPC1-222ENST00000523555 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
PABPC1-222ENST00000523555 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
PABPC1-222ENST00000523555 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
PABPC1-222ENST00000523555 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
PABPC1-222ENST00000523555 LCE1EQ5T753 118 aa2.37□□□□□ -2.03
PABPC1-222ENST00000523555 A0A0A0MQY5 61 aa2.34□□□□□ -2.03
PABPC1-222ENST00000523555 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
PABPC1-222ENST00000523555 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
PABPC1-222ENST00000523555 NDUFAF8A1L188 74 aa2.22□□□□□ -2.05
PABPC1-222ENST00000523555 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
PABPC1-222ENST00000523555 LCE3DQ9BYE3 92 aa2.17□□□□□ -2.06
PABPC1-222ENST00000523555 LCE1FQ5T754 118 aa2.15□□□□□ -2.07
PABPC1-222ENST00000523555 LCE3EQ5T5B0 92 aa2.05□□□□□ -2.08
PABPC1-222ENST00000523555 INE1O15225 51 aa1.98□□□□□ -2.09
PABPC1-222ENST00000523555 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
PABPC1-222ENST00000523555 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
PABPC1-222ENST00000523555 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.14
PABPC1-222ENST00000523555 PRM1P04553 51 aa1.59□□□□□ -2.15
PABPC1-222ENST00000523555 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
PABPC1-222ENST00000523555 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 97.6 ms