RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 LCE3AQ5TA76 89 aa5.78□□□□□ -1.48
CLN8-206ENST00000523237 MT1LQ93083 61 aa5.77□□□□□ -1.49
CLN8-206ENST00000523237 LINC01558Q9Y6Z2 57 aa5.77□□□□□ -1.49
CLN8-206ENST00000523237 MT1MQ8N339 61 aa5.76□□□□□ -1.49
CLN8-206ENST00000523237 KRTAP4-9Q9BYQ8 210 aa5.76□□□□□ -1.49
CLN8-206ENST00000523237 KRTAP4-2Q9BYR5 136 aa5.72□□□□□ -1.49
CLN8-206ENST00000523237 TMEM258P61165 79 aa5.68□□□□□ -1.5
CLN8-206ENST00000523237 UQCR11O14957 56 aa5.67□□□□□ -1.5
CLN8-206ENST00000523237 LCE4AQ5TA78 99 aa5.64□□□□□ -1.51
CLN8-206ENST00000523237 KRTAP4-3Q9BYR4 195 aa5.61□□□□□ -1.51
CLN8-206ENST00000523237 GPR98Q8WXG9 6306 aa5.6□□□□□ -1.51
CLN8-206ENST00000523237 MT4P47944 62 aa5.57□□□□□ -1.52
CLN8-206ENST00000523237 KRTAP12-3P60328 96 aa5.57□□□□□ -1.52
CLN8-206ENST00000523237 MIR22HGQ0VDD5 57 aa5.52□□□□□ -1.53
CLN8-206ENST00000523237 KRTAP5-4Q6L8H1 288 aa5.51□□□□□ -1.53
CLN8-206ENST00000523237 HMCN1Q96RW7 5635 aa5.5□□□□□ -1.53
CLN8-206ENST00000523237 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
CLN8-206ENST00000523237 KRTAP25-1Q3LHN0 102 aa5.47□□□□□ -1.53
CLN8-206ENST00000523237 K7ERS5 55 aa5.46□□□□□ -1.54
CLN8-206ENST00000523237 V9GYY9 64 aa5.41□□□□□ -1.54
CLN8-206ENST00000523237 KRTAP5-3Q6L8H2 238 aa5.4□□□□□ -1.54
CLN8-206ENST00000523237 PSPHP1O15172 72 aa5.38□□□□□ -1.55
CLN8-206ENST00000523237 Q1T7F1 81 aa5.35□□□□□ -1.55
CLN8-206ENST00000523237 AHNAK2Q8IVF2 5795 aa5.29□□□□□ -1.56
CLN8-206ENST00000523237 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
CLN8-206ENST00000523237 KRTAP5-5Q701N2 237 aaPredicted RBP5.28□□□□□ -1.56
CLN8-206ENST00000523237 KRTAP23-1A1A580 65 aa5.27□□□□□ -1.57
CLN8-206ENST00000523237 KRTAP5-10Q6L8G5 202 aa5.25□□□□□ -1.57
CLN8-206ENST00000523237 A6NED7 52 aa5.21□□□□□ -1.58
CLN8-206ENST00000523237 KRTAP20-2Q3LI61 65 aa5.21□□□□□ -1.58
CLN8-206ENST00000523237 KRTAP15-1Q3LI76 137 aa5.2□□□□□ -1.58
CLN8-206ENST00000523237 SPRR5A0A1B0GTR4 108 aa5.19□□□□□ -1.58
CLN8-206ENST00000523237 KRTAP12-4P60329 112 aa5.18□□□□□ -1.58
CLN8-206ENST00000523237 CDC42SE1Q9NRR8 79 aa5.14□□□□□ -1.59
CLN8-206ENST00000523237 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
CLN8-206ENST00000523237 KRTAP5-7Q6L8G8 165 aa5.06□□□□□ -1.6
CLN8-206ENST00000523237 ROMO1P60602 79 aa5.04□□□□□ -1.6
CLN8-206ENST00000523237 RPS28P62857 69 aaKnown RBP5□□□□□ -1.61
CLN8-206ENST00000523237 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
CLN8-206ENST00000523237 MT1AP04731 61 aa4.92□□□□□ -1.62
CLN8-206ENST00000523237 KRTAP6-1Q3LI64 71 aa4.88□□□□□ -1.63
CLN8-206ENST00000523237 PCP4P48539 62 aa4.84□□□□□ -1.63
CLN8-206ENST00000523237 KRTAP5-2Q701N4 177 aa4.82□□□□□ -1.64
CLN8-206ENST00000523237 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
CLN8-206ENST00000523237 H3BS24 57 aa4.75□□□□□ -1.65
CLN8-206ENST00000523237 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
CLN8-206ENST00000523237 KRTAP5-8O75690 187 aa4.6□□□□□ -1.67
CLN8-206ENST00000523237 OBSCNQ5VST9 7968 aa4.55□□□□□ -1.68
CLN8-206ENST00000523237 MT3P25713 68 aa4.51□□□□□ -1.69
CLN8-206ENST00000523237 BRK1Q8WUW1 75 aa4.38□□□□□ -1.71
CLN8-206ENST00000523237 MUC5ACP98088 5654 aa4.36□□□□□ -1.71
CLN8-206ENST00000523237 MUC5BQ9HC84 5762 aaPredicted RBP4.36□□□□□ -1.71
CLN8-206ENST00000523237 AHNAKQ09666 5890 aaKnown RBP4.34□□□□□ -1.71
CLN8-206ENST00000523237 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
CLN8-206ENST00000523237 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
CLN8-206ENST00000523237 PMAIP1Q13794 54 aa4.12□□□□□ -1.75
CLN8-206ENST00000523237 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
CLN8-206ENST00000523237 SVIPQ8NHG7 77 aa3.95□□□□□ -1.78
CLN8-206ENST00000523237 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
CLN8-206ENST00000523237 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
CLN8-206ENST00000523237 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
CLN8-206ENST00000523237 PRO0628Q9UI54 55 aa3.8□□□□□ -1.8
CLN8-206ENST00000523237 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
CLN8-206ENST00000523237 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
CLN8-206ENST00000523237 KTN1-AS1Q86SY8 53 aa3.59□□□□□ -1.83
CLN8-206ENST00000523237 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
CLN8-206ENST00000523237 LUZP6Q538Z0 58 aa3.42□□□□□ -1.86
CLN8-206ENST00000523237 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
CLN8-206ENST00000523237 A0A0A0MQY5 61 aa3.32□□□□□ -1.88
CLN8-206ENST00000523237 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
CLN8-206ENST00000523237 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
CLN8-206ENST00000523237 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
CLN8-206ENST00000523237 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
CLN8-206ENST00000523237 NDUFAF8A1L188 74 aa2.7□□□□□ -1.98
CLN8-206ENST00000523237 PRM1P04553 51 aa2.57□□□□□ -2
CLN8-206ENST00000523237 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
CLN8-206ENST00000523237 INE1O15225 51 aa2.23□□□□□ -2.05
CLN8-206ENST00000523237 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 76.9 ms