RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 KRTAP15-1Q3LI76 137 aa5.77□□□□□ -1.49
PCM1-218ENST00000523055 HMCN1Q96RW7 5635 aa5.77□□□□□ -1.49
PCM1-218ENST00000523055 KRTAP12-1P59990 96 aa5.76□□□□□ -1.49
PCM1-218ENST00000523055 PRR15LQ9BU68 103 aa5.76□□□□□ -1.49
PCM1-218ENST00000523055 AHNAK2Q8IVF2 5795 aa5.73□□□□□ -1.49
PCM1-218ENST00000523055 RPS28P62857 69 aaKnown RBP5.73□□□□□ -1.49
PCM1-218ENST00000523055 SMIM26A0A096LP01 95 aa5.72□□□□□ -1.49
PCM1-218ENST00000523055 A8MU10 97 aa5.71□□□□□ -1.5
PCM1-218ENST00000523055 Q1T7F1 81 aa5.71□□□□□ -1.5
PCM1-218ENST00000523055 PSPHP1O15172 72 aa5.67□□□□□ -1.5
PCM1-218ENST00000523055 KRTAP19-7Q3SYF9 63 aa5.67□□□□□ -1.5
PCM1-218ENST00000523055 KRTAP5-10Q6L8G5 202 aa5.67□□□□□ -1.5
PCM1-218ENST00000523055 V9GYY9 64 aa5.67□□□□□ -1.5
PCM1-218ENST00000523055 MT1EP04732 61 aa5.61□□□□□ -1.51
PCM1-218ENST00000523055 UQCR11O14957 56 aa5.6□□□□□ -1.51
PCM1-218ENST00000523055 MT4P47944 62 aa5.57□□□□□ -1.52
PCM1-218ENST00000523055 KRTAP19-5Q3LI72 72 aa5.54□□□□□ -1.52
PCM1-218ENST00000523055 MIR22HGQ0VDD5 57 aa5.53□□□□□ -1.52
PCM1-218ENST00000523055 KRTAP19-3Q7Z4W3 81 aa5.53□□□□□ -1.52
PCM1-218ENST00000523055 C10orf95Q9H7T3 257 aa5.52□□□□□ -1.53
PCM1-218ENST00000523055 KRTAP5-7Q6L8G8 165 aa5.5□□□□□ -1.53
PCM1-218ENST00000523055 A6NED7 52 aa5.47□□□□□ -1.53
PCM1-218ENST00000523055 LCE3AQ5TA76 89 aa5.45□□□□□ -1.54
PCM1-218ENST00000523055 TNP1P09430 55 aa5.42□□□□□ -1.54
PCM1-218ENST00000523055 KRTAP5-4Q6L8H1 288 aa5.39□□□□□ -1.55
PCM1-218ENST00000523055 MT1GP13640 62 aa5.38□□□□□ -1.55
PCM1-218ENST00000523055 KRTAP5-3Q6L8H2 238 aa5.38□□□□□ -1.55
PCM1-218ENST00000523055 MT1LQ93083 61 aa5.37□□□□□ -1.55
PCM1-218ENST00000523055 MT1MQ8N339 61 aa5.33□□□□□ -1.56
PCM1-218ENST00000523055 PP632Q6XCG6 107 aa5.31□□□□□ -1.56
PCM1-218ENST00000523055 CDC42SE1Q9NRR8 79 aa5.31□□□□□ -1.56
PCM1-218ENST00000523055 K7ERS5 55 aa5.29□□□□□ -1.56
PCM1-218ENST00000523055 KRTAP4-3Q9BYR4 195 aa5.27□□□□□ -1.57
PCM1-218ENST00000523055 SPRR5A0A1B0GTR4 108 aa5.24□□□□□ -1.57
PCM1-218ENST00000523055 KRTAP12-3P60328 96 aa5.21□□□□□ -1.58
PCM1-218ENST00000523055 A0A0A0MQY5 61 aa5.19□□□□□ -1.58
PCM1-218ENST00000523055 KRTAP25-1Q3LHN0 102 aa5.14□□□□□ -1.59
PCM1-218ENST00000523055 BRK1Q8WUW1 75 aa5.12□□□□□ -1.59
PCM1-218ENST00000523055 KRTAP20-2Q3LI61 65 aa5.1□□□□□ -1.59
PCM1-218ENST00000523055 ROMO1P60602 79 aa5.06□□□□□ -1.6
PCM1-218ENST00000523055 KRTAP5-5Q701N2 237 aaPredicted RBP4.91□□□□□ -1.62
PCM1-218ENST00000523055 SYNE1Q8NF91 8797 aaKnown RBP4.9□□□□□ -1.63
PCM1-218ENST00000523055 AHNAKQ09666 5890 aaKnown RBP4.85□□□□□ -1.63
PCM1-218ENST00000523055 MUC5ACP98088 5654 aa4.84□□□□□ -1.63
PCM1-218ENST00000523055 MUC5BQ9HC84 5762 aaPredicted RBP4.82□□□□□ -1.64
PCM1-218ENST00000523055 KRTAP12-4P60329 112 aa4.81□□□□□ -1.64
PCM1-218ENST00000523055 PMAIP1Q13794 54 aa4.8□□□□□ -1.64
PCM1-218ENST00000523055 LCE3CQ5T5A8 94 aa4.8□□□□□ -1.64
PCM1-218ENST00000523055 PRO0628Q9UI54 55 aa4.78□□□□□ -1.64
PCM1-218ENST00000523055 KRTAP5-8O75690 187 aa4.7□□□□□ -1.66
PCM1-218ENST00000523055 OBSCNQ5VST9 7968 aa4.62□□□□□ -1.67
PCM1-218ENST00000523055 KRTAP5-2Q701N4 177 aa4.62□□□□□ -1.67
PCM1-218ENST00000523055 PRAC1Q96KF2 57 aa4.62□□□□□ -1.67
PCM1-218ENST00000523055 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
PCM1-218ENST00000523055 KRTAP6-1Q3LI64 71 aa4.56□□□□□ -1.68
PCM1-218ENST00000523055 MT1AP04731 61 aa4.55□□□□□ -1.68
PCM1-218ENST00000523055 KTN1-AS1Q86SY8 53 aa4.49□□□□□ -1.69
PCM1-218ENST00000523055 MT3P25713 68 aa4.46□□□□□ -1.7
PCM1-218ENST00000523055 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
PCM1-218ENST00000523055 KRTAP5-1Q6L8H4 278 aa4.27□□□□□ -1.73
PCM1-218ENST00000523055 LCE1FQ5T754 118 aa4.12□□□□□ -1.75
PCM1-218ENST00000523055 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
PCM1-218ENST00000523055 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
PCM1-218ENST00000523055 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.77
PCM1-218ENST00000523055 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
PCM1-218ENST00000523055 LUZP6Q538Z0 58 aa3.72□□□□□ -1.81
PCM1-218ENST00000523055 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
PCM1-218ENST00000523055 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
PCM1-218ENST00000523055 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
PCM1-218ENST00000523055 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
PCM1-218ENST00000523055 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
PCM1-218ENST00000523055 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
PCM1-218ENST00000523055 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
PCM1-218ENST00000523055 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
PCM1-218ENST00000523055 INE1O15225 51 aa2.76□□□□□ -1.97
PCM1-218ENST00000523055 PRM1P04553 51 aa2.64□□□□□ -1.99
PCM1-218ENST00000523055 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
PCM1-218ENST00000523055 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 119.5 ms