RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 PP632Q6XCG6 107 aa2.34□□□□□ -2.03
PABPC1-220ENST00000522658 DSTQ03001 7570 aaKnown RBP2.34□□□□□ -2.03
PABPC1-220ENST00000522658 LINC00643Q86TS7 51 aa2.33□□□□□ -2.04
PABPC1-220ENST00000522658 OCR1Q9BZK8 76 aa2.32□□□□□ -2.04
PABPC1-220ENST00000522658 MT1EP04732 61 aa2.31□□□□□ -2.04
PABPC1-220ENST00000522658 KRTAP19-7Q3SYF9 63 aa2.28□□□□□ -2.04
PABPC1-220ENST00000522658 MT1GP13640 62 aa2.27□□□□□ -2.05
PABPC1-220ENST00000522658 A0A0D9SG42 100 aa2.26□□□□□ -2.05
PABPC1-220ENST00000522658 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
PABPC1-220ENST00000522658 SEC61GP60059 68 aa2.25□□□□□ -2.05
PABPC1-220ENST00000522658 LOC105371267A0A1B0GV96 52 aa2.24□□□□□ -2.05
PABPC1-220ENST00000522658 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
PABPC1-220ENST00000522658 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
PABPC1-220ENST00000522658 PCP4L1A6NKN8 68 aa2.23□□□□□ -2.05
PABPC1-220ENST00000522658 KRTAP19-5Q3LI72 72 aa2.23□□□□□ -2.05
PABPC1-220ENST00000522658 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
PABPC1-220ENST00000522658 SPINT4Q6UDR6 99 aa2.23□□□□□ -2.05
PABPC1-220ENST00000522658 J3QR89 54 aa2.22□□□□□ -2.05
PABPC1-220ENST00000522658 SERP1Q9Y6X1 66 aa2.22□□□□□ -2.05
PABPC1-220ENST00000522658 SPRR5A0A1B0GTR4 108 aa2.21□□□□□ -2.06
PABPC1-220ENST00000522658 MT1MQ8N339 61 aa2.21□□□□□ -2.06
PABPC1-220ENST00000522658 KRTAP13-4Q3LI77 160 aa2.2□□□□□ -2.06
PABPC1-220ENST00000522658 SMIM20Q8N5G0 67 aa2.2□□□□□ -2.06
PABPC1-220ENST00000522658 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
PABPC1-220ENST00000522658 MT1LQ93083 61 aa2.18□□□□□ -2.06
PABPC1-220ENST00000522658 C10orf95Q9H7T3 257 aa2.15□□□□□ -2.07
PABPC1-220ENST00000522658 SNURFQ9Y675 71 aa2.15□□□□□ -2.07
PABPC1-220ENST00000522658 TNP1P09430 55 aa2.14□□□□□ -2.07
PABPC1-220ENST00000522658 SPATA8Q6RVD6 105 aa2.14□□□□□ -2.07
PABPC1-220ENST00000522658 SPANXA2-OT1Q8N9U9 137 aa2.13□□□□□ -2.07
PABPC1-220ENST00000522658 SMIM26A0A096LP01 95 aa2.12□□□□□ -2.07
PABPC1-220ENST00000522658 A0A1B0GU33 70 aa2.12□□□□□ -2.07
PABPC1-220ENST00000522658 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
PABPC1-220ENST00000522658 KRTAP20-2Q3LI61 65 aa2.1□□□□□ -2.07
PABPC1-220ENST00000522658 COA5Q86WW8 74 aa2.1□□□□□ -2.07
PABPC1-220ENST00000522658 KRTAP12-1P59990 96 aa2.09□□□□□ -2.07
PABPC1-220ENST00000522658 A0A1B0GV90 55 aa2.08□□□□□ -2.08
PABPC1-220ENST00000522658 SERP2Q8N6R1 65 aa2.07□□□□□ -2.08
PABPC1-220ENST00000522658 A0A1B0GU69 56 aa2.05□□□□□ -2.08
PABPC1-220ENST00000522658 KRTAP12-3P60328 96 aa2.04□□□□□ -2.08
PABPC1-220ENST00000522658 K7ERU9 68 aa2.01□□□□□ -2.09
PABPC1-220ENST00000522658 PRR15LQ9BU68 103 aa1.99□□□□□ -2.09
PABPC1-220ENST00000522658 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
PABPC1-220ENST00000522658 KRTAP25-1Q3LHN0 102 aa1.92□□□□□ -2.1
PABPC1-220ENST00000522658 K7ERS5 55 aa1.9□□□□□ -2.11
PABPC1-220ENST00000522658 COX7CP15954 63 aa1.9□□□□□ -2.11
PABPC1-220ENST00000522658 SYNE1Q8NF91 8797 aaKnown RBP1.88□□□□□ -2.11
PABPC1-220ENST00000522658 H7BZZ5 65 aa1.88□□□□□ -2.11
PABPC1-220ENST00000522658 UQCR11O14957 56 aa1.86□□□□□ -2.11
PABPC1-220ENST00000522658 MT1AP04731 61 aa1.86□□□□□ -2.11
PABPC1-220ENST00000522658 MUC5ACP98088 5654 aa1.84□□□□□ -2.11
PABPC1-220ENST00000522658 KRTAP6-1Q3LI64 71 aa1.84□□□□□ -2.11
PABPC1-220ENST00000522658 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
PABPC1-220ENST00000522658 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
PABPC1-220ENST00000522658 ATP5EP56381 51 aaPredicted RBP1.82□□□□□ -2.12
PABPC1-220ENST00000522658 KRTAP6-2Q3LI66 62 aa1.81□□□□□ -2.12
PABPC1-220ENST00000522658 LINC01558Q9Y6Z2 57 aa1.81□□□□□ -2.12
PABPC1-220ENST00000522658 MIR22HGQ0VDD5 57 aa1.79□□□□□ -2.12
PABPC1-220ENST00000522658 ANAPC13Q9BS18 74 aa1.78□□□□□ -2.12
PABPC1-220ENST00000522658 RPS28P62857 69 aaKnown RBP1.76□□□□□ -2.13
PABPC1-220ENST00000522658 CDC42SE1Q9NRR8 79 aa1.72□□□□□ -2.13
PABPC1-220ENST00000522658 CCDC179H3BU77 68 aa1.68□□□□□ -2.14
PABPC1-220ENST00000522658 TMEM258P61165 79 aa1.67□□□□□ -2.14
PABPC1-220ENST00000522658 V9GYY9 64 aa1.67□□□□□ -2.14
PABPC1-220ENST00000522658 PSPHP1O15172 72 aa1.65□□□□□ -2.15
PABPC1-220ENST00000522658 A6NED7 52 aa1.63□□□□□ -2.15
PABPC1-220ENST00000522658 ROMO1P60602 79 aa1.63□□□□□ -2.15
PABPC1-220ENST00000522658 Q1T7F1 81 aa1.62□□□□□ -2.15
PABPC1-220ENST00000522658 PRO0628Q9UI54 55 aa1.46□□□□□ -2.18
PABPC1-220ENST00000522658 LUZP6Q538Z0 58 aa1.43□□□□□ -2.18
PABPC1-220ENST00000522658 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
PABPC1-220ENST00000522658 BRK1Q8WUW1 75 aa1.24□□□□□ -2.21
PABPC1-220ENST00000522658 PMAIP1Q13794 54 aa1.09□□□□□ -2.23
PABPC1-220ENST00000522658 KTN1-AS1Q86SY8 53 aa1.06□□□□□ -2.24
PABPC1-220ENST00000522658 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
PABPC1-220ENST00000522658 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
PABPC1-220ENST00000522658 PRM1P04553 51 aa0.82□□□□□ -2.28
PABPC1-220ENST00000522658 INE1O15225 51 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 96.7 ms