RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-215ENST00000522275 LCE3CQ5T5A8 94 aa1.62□□□□□ -2.15
PCM1-215ENST00000522275 KRTAP9-6A8MVA2 160 aa1.62□□□□□ -2.15
PCM1-215ENST00000522275 KRTAP5-2Q701N4 177 aa1.57□□□□□ -2.16
PCM1-215ENST00000522275 MUC2Q02817 5179 aa1.56□□□□□ -2.16
PCM1-215ENST00000522275 KRTAP5-8O75690 187 aa1.56□□□□□ -2.16
PCM1-215ENST00000522275 CRCT1Q9UGL9 99 aa1.56□□□□□ -2.16
PCM1-215ENST00000522275 J3QKU1 62 aa1.55□□□□□ -2.16
PCM1-215ENST00000522275 KRTAP19-2Q3LHN2 52 aa1.55□□□□□ -2.16
PCM1-215ENST00000522275 BIRC6Q9NR09 4857 aa1.55□□□□□ -2.16
PCM1-215ENST00000522275 SPRR2GQ9BYE4 73 aa1.55□□□□□ -2.16
PCM1-215ENST00000522275 KRTAP4-1Q9BYQ7 146 aa1.54□□□□□ -2.16
PCM1-215ENST00000522275 RYR1P21817 5038 aa1.52□□□□□ -2.17
PCM1-215ENST00000522275 RYR3Q15413 4870 aa1.52□□□□□ -2.17
PCM1-215ENST00000522275 KRTAP19-5Q3LI72 72 aa1.51□□□□□ -2.17
PCM1-215ENST00000522275 HERC1Q15751 4861 aa1.5□□□□□ -2.17
PCM1-215ENST00000522275 MT1HL1P0DM35 61 aa1.49□□□□□ -2.17
PCM1-215ENST00000522275 PRM1P04553 51 aa1.48□□□□□ -2.17
PCM1-215ENST00000522275 KRTAP4-3Q9BYR4 195 aa1.48□□□□□ -2.17
PCM1-215ENST00000522275 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
PCM1-215ENST00000522275 MT1XP80297 61 aa1.47□□□□□ -2.17
PCM1-215ENST00000522275 DNHD1Q96M86 4753 aa1.47□□□□□ -2.17
PCM1-215ENST00000522275 KRTAP20-1Q3LI63 56 aa1.45□□□□□ -2.18
PCM1-215ENST00000522275 RYR2Q92736 4967 aa1.44□□□□□ -2.18
PCM1-215ENST00000522275 ABCA13Q86UQ4 5058 aa1.43□□□□□ -2.18
PCM1-215ENST00000522275 SYNE1Q8NF91 8797 aaKnown RBP1.43□□□□□ -2.18
PCM1-215ENST00000522275 LCE3EQ5T5B0 92 aa1.41□□□□□ -2.18
PCM1-215ENST00000522275 NEBP20929 6669 aa1.41□□□□□ -2.18
PCM1-215ENST00000522275 KRTAP5-5Q701N2 237 aaPredicted RBP1.4□□□□□ -2.19
PCM1-215ENST00000522275 HMCN2Q8NDA2 5059 aa1.4□□□□□ -2.19
PCM1-215ENST00000522275 KRTAP19-8Q3LI54 63 aa1.39□□□□□ -2.19
PCM1-215ENST00000522275 EPPK1P58107 5090 aaKnown RBP1.38□□□□□ -2.19
PCM1-215ENST00000522275 OBSCNQ5VST9 7968 aa1.38□□□□□ -2.19
PCM1-215ENST00000522275 SSPOA2VEC9 5147 aa1.38□□□□□ -2.19
PCM1-215ENST00000522275 MT1BP07438 61 aa1.37□□□□□ -2.19
PCM1-215ENST00000522275 KMT2DO14686 5537 aa1.35□□□□□ -2.19
PCM1-215ENST00000522275 MACF1Q9UPN3 7388 aaKnown RBP1.35□□□□□ -2.19
PCM1-215ENST00000522275 HERC2O95714 4834 aa1.33□□□□□ -2.2
PCM1-215ENST00000522275 MT1FP04733 61 aa1.33□□□□□ -2.2
PCM1-215ENST00000522275 KRTAP5-7Q6L8G8 165 aa1.33□□□□□ -2.2
PCM1-215ENST00000522275 LCE3DQ9BYE3 92 aa1.33□□□□□ -2.2
PCM1-215ENST00000522275 FAT4Q6V0I7 4981 aa1.32□□□□□ -2.2
PCM1-215ENST00000522275 SYNE2Q8WXH0 6885 aaKnown RBP1.32□□□□□ -2.2
PCM1-215ENST00000522275 KRTAP19-7Q3SYF9 63 aa1.31□□□□□ -2.2
PCM1-215ENST00000522275 MT1AP04731 61 aa1.3□□□□□ -2.2
PCM1-215ENST00000522275 MT2AP02795 61 aa1.3□□□□□ -2.2
PCM1-215ENST00000522275 MT1LQ93083 61 aa1.3□□□□□ -2.2
PCM1-215ENST00000522275 RNF213Q63HN8 5207 aa1.29□□□□□ -2.2
PCM1-215ENST00000522275 KRTAP6-2Q3LI66 62 aa1.29□□□□□ -2.2
PCM1-215ENST00000522275 AHNAK2Q8IVF2 5795 aa1.29□□□□□ -2.2
PCM1-215ENST00000522275 MT1EP04732 61 aa1.28□□□□□ -2.2
PCM1-215ENST00000522275 MT1GP13640 62 aa1.28□□□□□ -2.2
PCM1-215ENST00000522275 MUC19Q7Z5P9 8384 aa1.23□□□□□ -2.21
PCM1-215ENST00000522275 USH2AO75445 5202 aa1.22□□□□□ -2.21
PCM1-215ENST00000522275 MT1HP80294 61 aa1.21□□□□□ -2.22
PCM1-215ENST00000522275 KRTAP5-10Q6L8G5 202 aa1.18□□□□□ -2.22
PCM1-215ENST00000522275 FSIP2Q5CZC0 6907 aa1.18□□□□□ -2.22
PCM1-215ENST00000522275 FCGBPQ9Y6R7 5405 aaPredicted RBP1.17□□□□□ -2.22
PCM1-215ENST00000522275 SPRR2FQ96RM1 72 aa1.17□□□□□ -2.22
PCM1-215ENST00000522275 DSTQ03001 7570 aaKnown RBP1.15□□□□□ -2.23
PCM1-215ENST00000522275 KRTAP6-1Q3LI64 71 aa1.13□□□□□ -2.23
PCM1-215ENST00000522275 MT1MQ8N339 61 aa1.12□□□□□ -2.23
PCM1-215ENST00000522275 MUC5ACP98088 5654 aa1.11□□□□□ -2.23
PCM1-215ENST00000522275 SPRR2DP22532 72 aa1.11□□□□□ -2.23
PCM1-215ENST00000522275 SPRR2AP35326 72 aa1.1□□□□□ -2.23
PCM1-215ENST00000522275 MDN1Q9NU22 5596 aa1.09□□□□□ -2.24
PCM1-215ENST00000522275 SPRR2EP22531 72 aa1.08□□□□□ -2.24
PCM1-215ENST00000522275 LCE1CQ5T751 118 aa1.07□□□□□ -2.24
PCM1-215ENST00000522275 LCE1BQ5T7P3 118 aa1.07□□□□□ -2.24
PCM1-215ENST00000522275 SPRR2BP35325 72 aa1.06□□□□□ -2.24
PCM1-215ENST00000522275 KRTAP19-3Q7Z4W3 81 aa1.06□□□□□ -2.24
PCM1-215ENST00000522275 MUC12Q9UKN1 5478 aa1.01□□□□□ -2.25
PCM1-215ENST00000522275 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
PCM1-215ENST00000522275 KRTAP19-6Q3LI70 58 aa0.79□□□□□ -2.28
PCM1-215ENST00000522275 KRTAP21-2Q3LI59 83 aa0.76□□□□□ -2.29
PCM1-215ENST00000522275 PHGR1C9JFL3 82 aa0.7□□□□□ -2.3
PCM1-215ENST00000522275 KRTAP20-2Q3LI61 65 aa0.57□□□□□ -2.32
PCM1-215ENST00000522275 MT4P47944 62 aa0.55□□□□□ -2.32
PCM1-215ENST00000522275 MUC16Q8WXI7 14507 aa0.49□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 7.7 ms