RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 F8W1H4 67 aa3.25□□□□□ -1.89
CTNNA1-234ENST00000522227 ETDBQ3ZM63 59 aa3.24□□□□□ -1.89
CTNNA1-234ENST00000522227 MT1AP04731 61 aa3.23□□□□□ -1.89
CTNNA1-234ENST00000522227 TNP1P09430 55 aa3.23□□□□□ -1.89
CTNNA1-234ENST00000522227 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
CTNNA1-234ENST00000522227 SPATA8Q6RVD6 105 aa3.22□□□□□ -1.89
CTNNA1-234ENST00000522227 KRTAP12-1P59990 96 aa3.21□□□□□ -1.9
CTNNA1-234ENST00000522227 OCR1Q9BZK8 76 aa3.21□□□□□ -1.9
CTNNA1-234ENST00000522227 SCGB1A1P11684 91 aa3.2□□□□□ -1.9
CTNNA1-234ENST00000522227 FAM240AA0A1B0GVK7 77 aa3.18□□□□□ -1.9
CTNNA1-234ENST00000522227 ATP5EP2Q5VTU8 51 aa3.18□□□□□ -1.9
CTNNA1-234ENST00000522227 H3BS24 57 aa3.17□□□□□ -1.9
CTNNA1-234ENST00000522227 K7ERU9 68 aa3.17□□□□□ -1.9
CTNNA1-234ENST00000522227 H3BPC8 53 aa3.15□□□□□ -1.91
CTNNA1-234ENST00000522227 J3QR89 54 aa3.11□□□□□ -1.91
CTNNA1-234ENST00000522227 LINC00643Q86TS7 51 aa3.1□□□□□ -1.91
CTNNA1-234ENST00000522227 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.92
CTNNA1-234ENST00000522227 A0A1B0GU33 70 aa3□□□□□ -1.93
CTNNA1-234ENST00000522227 SERP1Q9Y6X1 66 aa3□□□□□ -1.93
CTNNA1-234ENST00000522227 SEC61GP60059 68 aa2.99□□□□□ -1.93
CTNNA1-234ENST00000522227 KRTAP25-1Q3LHN0 102 aa2.99□□□□□ -1.93
CTNNA1-234ENST00000522227 MT3P25713 68 aa2.98□□□□□ -1.93
CTNNA1-234ENST00000522227 A8MU10 97 aa2.97□□□□□ -1.93
CTNNA1-234ENST00000522227 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
CTNNA1-234ENST00000522227 SMIM20Q8N5G0 67 aa2.97□□□□□ -1.93
CTNNA1-234ENST00000522227 ANAPC13Q9BS18 74 aa2.96□□□□□ -1.94
CTNNA1-234ENST00000522227 CCDC179H3BU77 68 aa2.91□□□□□ -1.94
CTNNA1-234ENST00000522227 KRTAP19-4Q3LI73 84 aa2.9□□□□□ -1.95
CTNNA1-234ENST00000522227 SMIM26A0A096LP01 95 aa2.89□□□□□ -1.95
CTNNA1-234ENST00000522227 RPS28P62857 69 aaKnown RBP2.89□□□□□ -1.95
CTNNA1-234ENST00000522227 KRTAP15-1Q3LI76 137 aa2.89□□□□□ -1.95
CTNNA1-234ENST00000522227 KRTAP4-2Q9BYR5 136 aa2.89□□□□□ -1.95
CTNNA1-234ENST00000522227 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
CTNNA1-234ENST00000522227 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
CTNNA1-234ENST00000522227 V9GYY9 64 aa2.85□□□□□ -1.95
CTNNA1-234ENST00000522227 SNURFQ9Y675 71 aa2.84□□□□□ -1.95
CTNNA1-234ENST00000522227 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
CTNNA1-234ENST00000522227 SERP2Q8N6R1 65 aa2.83□□□□□ -1.96
CTNNA1-234ENST00000522227 TMEM258P61165 79 aa2.81□□□□□ -1.96
CTNNA1-234ENST00000522227 PRO0628Q9UI54 55 aa2.81□□□□□ -1.96
CTNNA1-234ENST00000522227 COX7CP15954 63 aa2.79□□□□□ -1.96
CTNNA1-234ENST00000522227 COA5Q86WW8 74 aa2.79□□□□□ -1.96
CTNNA1-234ENST00000522227 SPANXA2-OT1Q8N9U9 137 aa2.79□□□□□ -1.96
CTNNA1-234ENST00000522227 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
CTNNA1-234ENST00000522227 H7BZZ5 65 aa2.7□□□□□ -1.98
CTNNA1-234ENST00000522227 ATP5EP56381 51 aaPredicted RBP2.68□□□□□ -1.98
CTNNA1-234ENST00000522227 A0A1B0GU69 56 aa2.66□□□□□ -1.98
CTNNA1-234ENST00000522227 PMAIP1Q13794 54 aa2.65□□□□□ -1.99
CTNNA1-234ENST00000522227 KRTAP23-1A1A580 65 aa2.64□□□□□ -1.99
CTNNA1-234ENST00000522227 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
CTNNA1-234ENST00000522227 BRK1Q8WUW1 75 aa2.64□□□□□ -1.99
CTNNA1-234ENST00000522227 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
CTNNA1-234ENST00000522227 PRR15LQ9BU68 103 aa2.57□□□□□ -2
CTNNA1-234ENST00000522227 Q1T7F1 81 aa2.56□□□□□ -2
CTNNA1-234ENST00000522227 KTN1-AS1Q86SY8 53 aa2.55□□□□□ -2
CTNNA1-234ENST00000522227 A0A0A0MQY5 61 aa2.53□□□□□ -2
CTNNA1-234ENST00000522227 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
CTNNA1-234ENST00000522227 LINC01558Q9Y6Z2 57 aa2.5□□□□□ -2.01
CTNNA1-234ENST00000522227 UQCR11O14957 56 aa2.45□□□□□ -2.02
CTNNA1-234ENST00000522227 PSPHP1O15172 72 aa2.44□□□□□ -2.02
CTNNA1-234ENST00000522227 CDC42SE1Q9NRR8 79 aa2.43□□□□□ -2.02
CTNNA1-234ENST00000522227 MIR22HGQ0VDD5 57 aa2.4□□□□□ -2.03
CTNNA1-234ENST00000522227 K7ERS5 55 aa2.38□□□□□ -2.03
CTNNA1-234ENST00000522227 A6NED7 52 aa2.37□□□□□ -2.03
CTNNA1-234ENST00000522227 PRAC1Q96KF2 57 aa2.31□□□□□ -2.04
CTNNA1-234ENST00000522227 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
CTNNA1-234ENST00000522227 ROMO1P60602 79 aa2.22□□□□□ -2.05
CTNNA1-234ENST00000522227 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
CTNNA1-234ENST00000522227 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
CTNNA1-234ENST00000522227 LUZP6Q538Z0 58 aa2.14□□□□□ -2.07
CTNNA1-234ENST00000522227 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
CTNNA1-234ENST00000522227 NDUFAF8A1L188 74 aa2.04□□□□□ -2.08
CTNNA1-234ENST00000522227 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
CTNNA1-234ENST00000522227 LCE3DQ9BYE3 92 aa2.01□□□□□ -2.09
CTNNA1-234ENST00000522227 LCE3EQ5T5B0 92 aa1.78□□□□□ -2.12
CTNNA1-234ENST00000522227 INE1O15225 51 aa1.76□□□□□ -2.13
CTNNA1-234ENST00000522227 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
CTNNA1-234ENST00000522227 PRM1P04553 51 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 31.1 ms