RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 KRTAP5-10Q6L8G5 202 aa7.16□□□□□ -1.26
PABPC1-218ENST00000521865 COX7CP15954 63 aa7.15□□□□□ -1.26
PABPC1-218ENST00000521865 H7BZZ5 65 aa7.11□□□□□ -1.27
PABPC1-218ENST00000521865 KRTAP4-7Q9BYR0 210 aa7.03□□□□□ -1.28
PABPC1-218ENST00000521865 KRTAP12-3P60328 96 aa6.97□□□□□ -1.29
PABPC1-218ENST00000521865 KRTAP5-3Q6L8H2 238 aa6.94□□□□□ -1.3
PABPC1-218ENST00000521865 KRTAP5-7Q6L8G8 165 aa6.91□□□□□ -1.3
PABPC1-218ENST00000521865 PRR15LQ9BU68 103 aa6.89□□□□□ -1.31
PABPC1-218ENST00000521865 KRTAP20-2Q3LI61 65 aa6.88□□□□□ -1.31
PABPC1-218ENST00000521865 SPRR5A0A1B0GTR4 108 aa6.8□□□□□ -1.32
PABPC1-218ENST00000521865 KRTAP5-5Q701N2 237 aaPredicted RBP6.8□□□□□ -1.32
PABPC1-218ENST00000521865 KRTAP12-4P60329 112 aa6.79□□□□□ -1.32
PABPC1-218ENST00000521865 ANAPC13Q9BS18 74 aa6.73□□□□□ -1.33
PABPC1-218ENST00000521865 LOC100996750A0A140TA64 210 aa6.68□□□□□ -1.34
PABPC1-218ENST00000521865 LINC01558Q9Y6Z2 57 aa6.68□□□□□ -1.34
PABPC1-218ENST00000521865 UQCR11O14957 56 aa6.63□□□□□ -1.35
PABPC1-218ENST00000521865 ATP5EP56381 51 aaPredicted RBP6.63□□□□□ -1.35
PABPC1-218ENST00000521865 SYNE1Q8NF91 8797 aaKnown RBP6.62□□□□□ -1.35
PABPC1-218ENST00000521865 KRTAP25-1Q3LHN0 102 aa6.61□□□□□ -1.35
PABPC1-218ENST00000521865 CCDC179H3BU77 68 aa6.6□□□□□ -1.35
PABPC1-218ENST00000521865 KRTAP19-4Q3LI73 84 aa6.5□□□□□ -1.37
PABPC1-218ENST00000521865 K7ERS5 55 aa6.45□□□□□ -1.38
PABPC1-218ENST00000521865 MIR22HGQ0VDD5 57 aa6.45□□□□□ -1.38
PABPC1-218ENST00000521865 KRTAP15-1Q3LI76 137 aa6.4□□□□□ -1.38
PABPC1-218ENST00000521865 LCE3CQ5T5A8 94 aa6.38□□□□□ -1.39
PABPC1-218ENST00000521865 KRTAP4-11Q9BYQ6 195 aa6.36□□□□□ -1.39
PABPC1-218ENST00000521865 TMEM258P61165 79 aa6.32□□□□□ -1.4
PABPC1-218ENST00000521865 KRTAP23-1A1A580 65 aa6.3□□□□□ -1.4
PABPC1-218ENST00000521865 MT1AP04731 61 aa6.27□□□□□ -1.41
PABPC1-218ENST00000521865 KRTAP6-1Q3LI64 71 aa6.26□□□□□ -1.41
PABPC1-218ENST00000521865 KRTAP5-2Q701N4 177 aa6.26□□□□□ -1.41
PABPC1-218ENST00000521865 PSPHP1O15172 72 aa6.15□□□□□ -1.42
PABPC1-218ENST00000521865 KRTAP5-8O75690 187 aa6.13□□□□□ -1.43
PABPC1-218ENST00000521865 KRTAP9-4Q9BYQ2 154 aa6.1□□□□□ -1.43
PABPC1-218ENST00000521865 V9GYY9 64 aa6.08□□□□□ -1.44
PABPC1-218ENST00000521865 AHNAKQ09666 5890 aaKnown RBP6.07□□□□□ -1.44
PABPC1-218ENST00000521865 KRTAP6-2Q3LI66 62 aa6.06□□□□□ -1.44
PABPC1-218ENST00000521865 MUC5ACP98088 5654 aa6.06□□□□□ -1.44
PABPC1-218ENST00000521865 OBSCNQ5VST9 7968 aa6.04□□□□□ -1.44
PABPC1-218ENST00000521865 CDC42SE1Q9NRR8 79 aa6.03□□□□□ -1.44
PABPC1-218ENST00000521865 MUC5BQ9HC84 5762 aaPredicted RBP6.03□□□□□ -1.44
PABPC1-218ENST00000521865 RPS28P62857 69 aaKnown RBP6□□□□□ -1.45
PABPC1-218ENST00000521865 KRTAP9-6A8MVA2 160 aa5.99□□□□□ -1.45
PABPC1-218ENST00000521865 Q1T7F1 81 aa5.99□□□□□ -1.45
PABPC1-218ENST00000521865 A6NED7 52 aa5.94□□□□□ -1.46
PABPC1-218ENST00000521865 KRTAP9-9Q9BYP9 154 aa5.93□□□□□ -1.46
PABPC1-218ENST00000521865 ROMO1P60602 79 aa5.89□□□□□ -1.47
PABPC1-218ENST00000521865 MT3P25713 68 aa5.78□□□□□ -1.48
PABPC1-218ENST00000521865 KRTAP5-1Q6L8H4 278 aa5.69□□□□□ -1.5
PABPC1-218ENST00000521865 LCE1EQ5T753 118 aa5.34□□□□□ -1.55
PABPC1-218ENST00000521865 PCP4P48539 62 aa5.33□□□□□ -1.56
PABPC1-218ENST00000521865 KRTAP4-12Q9BQ66 201 aa5.3□□□□□ -1.56
PABPC1-218ENST00000521865 LCE1BQ5T7P3 118 aa5.14□□□□□ -1.59
PABPC1-218ENST00000521865 KRTAP4-2Q9BYR5 136 aa5.07□□□□□ -1.6
PABPC1-218ENST00000521865 LCE1CQ5T751 118 aa4.96□□□□□ -1.62
PABPC1-218ENST00000521865 H3BS24 57 aa4.79□□□□□ -1.64
PABPC1-218ENST00000521865 BRK1Q8WUW1 75 aa4.78□□□□□ -1.64
PABPC1-218ENST00000521865 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
PABPC1-218ENST00000521865 KRTAP5-11Q6L8G4 156 aa4.51□□□□□ -1.69
PABPC1-218ENST00000521865 PMAIP1Q13794 54 aa4.5□□□□□ -1.69
PABPC1-218ENST00000521865 LCE1FQ5T754 118 aa4.47□□□□□ -1.69
PABPC1-218ENST00000521865 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
PABPC1-218ENST00000521865 PRAC1Q96KF2 57 aa4.32□□□□□ -1.72
PABPC1-218ENST00000521865 PHGR1C9JFL3 82 aa4.24□□□□□ -1.73
PABPC1-218ENST00000521865 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
PABPC1-218ENST00000521865 KRTAP21-2Q3LI59 83 aa4.1□□□□□ -1.75
PABPC1-218ENST00000521865 PRO0628Q9UI54 55 aa4.09□□□□□ -1.75
PABPC1-218ENST00000521865 KTN1-AS1Q86SY8 53 aa3.95□□□□□ -1.78
PABPC1-218ENST00000521865 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
PABPC1-218ENST00000521865 SVIPQ8NHG7 77 aa3.8□□□□□ -1.8
PABPC1-218ENST00000521865 LUZP6Q538Z0 58 aa3.75□□□□□ -1.81
PABPC1-218ENST00000521865 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
PABPC1-218ENST00000521865 KRTAP21-1Q3LI58 79 aa3.2□□□□□ -1.9
PABPC1-218ENST00000521865 PRM1P04553 51 aa3□□□□□ -1.93
PABPC1-218ENST00000521865 A0A0A0MQY5 61 aa2.89□□□□□ -1.95
PABPC1-218ENST00000521865 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
PABPC1-218ENST00000521865 MUC16Q8WXI7 14507 aa2.54□□□□□ -2
PABPC1-218ENST00000521865 INE1O15225 51 aa2.3□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 7.7 ms