RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 CAMK2N1Q7Z7J9 78 aa3.34□□□□□ -1.87
CTNNA1-229ENST00000521683 MT1EP04732 61 aa3.33□□□□□ -1.88
CTNNA1-229ENST00000521683 KRTAP13-4Q3LI77 160 aa3.33□□□□□ -1.88
CTNNA1-229ENST00000521683 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
CTNNA1-229ENST00000521683 COA5Q86WW8 74 aa3.32□□□□□ -1.88
CTNNA1-229ENST00000521683 PRO0628Q9UI54 55 aa3.31□□□□□ -1.88
CTNNA1-229ENST00000521683 LINC01558Q9Y6Z2 57 aa3.28□□□□□ -1.88
CTNNA1-229ENST00000521683 PRR15LQ9BU68 103 aa3.26□□□□□ -1.89
CTNNA1-229ENST00000521683 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
CTNNA1-229ENST00000521683 MT1GP13640 62 aa3.24□□□□□ -1.89
CTNNA1-229ENST00000521683 BRK1Q8WUW1 75 aa3.24□□□□□ -1.89
CTNNA1-229ENST00000521683 A0A0D9SG42 100 aa3.22□□□□□ -1.89
CTNNA1-229ENST00000521683 PSPHP1O15172 72 aa3.22□□□□□ -1.89
CTNNA1-229ENST00000521683 PP632Q6XCG6 107 aa3.22□□□□□ -1.89
CTNNA1-229ENST00000521683 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.9
CTNNA1-229ENST00000521683 A6NED7 52 aa3.19□□□□□ -1.9
CTNNA1-229ENST00000521683 A0A1B0GU69 56 aa3.18□□□□□ -1.9
CTNNA1-229ENST00000521683 SEC61GP60059 68 aa3.18□□□□□ -1.9
CTNNA1-229ENST00000521683 MT1MQ8N339 61 aa3.18□□□□□ -1.9
CTNNA1-229ENST00000521683 CDC42SE1Q9NRR8 79 aa3.18□□□□□ -1.9
CTNNA1-229ENST00000521683 MT4P47944 62 aa3.16□□□□□ -1.9
CTNNA1-229ENST00000521683 SPATA8Q6RVD6 105 aa3.16□□□□□ -1.9
CTNNA1-229ENST00000521683 SPINT4Q6UDR6 99 aa3.16□□□□□ -1.9
CTNNA1-229ENST00000521683 MT1LQ93083 61 aa3.16□□□□□ -1.9
CTNNA1-229ENST00000521683 KRTAP12-1P59990 96 aa3.15□□□□□ -1.91
CTNNA1-229ENST00000521683 A0A1B0GU33 70 aa3.14□□□□□ -1.91
CTNNA1-229ENST00000521683 UQCR11O14957 56 aa3.14□□□□□ -1.91
CTNNA1-229ENST00000521683 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
CTNNA1-229ENST00000521683 PRAC1Q96KF2 57 aa3.13□□□□□ -1.91
CTNNA1-229ENST00000521683 PMAIP1Q13794 54 aa3.1□□□□□ -1.91
CTNNA1-229ENST00000521683 MIR22HGQ0VDD5 57 aa3.09□□□□□ -1.91
CTNNA1-229ENST00000521683 KRTAP5-10Q6L8G5 202 aa3.09□□□□□ -1.91
CTNNA1-229ENST00000521683 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
CTNNA1-229ENST00000521683 C10orf95Q9H7T3 257 aa3.08□□□□□ -1.92
CTNNA1-229ENST00000521683 LCE3AQ5TA76 89 aa3.07□□□□□ -1.92
CTNNA1-229ENST00000521683 TNP1P09430 55 aa3.05□□□□□ -1.92
CTNNA1-229ENST00000521683 KTN1-AS1Q86SY8 53 aa3.03□□□□□ -1.92
CTNNA1-229ENST00000521683 A8MU10 97 aa3.01□□□□□ -1.93
CTNNA1-229ENST00000521683 K7ERS5 55 aa3.01□□□□□ -1.93
CTNNA1-229ENST00000521683 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
CTNNA1-229ENST00000521683 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
CTNNA1-229ENST00000521683 MT3P25713 68 aa2.97□□□□□ -1.93
CTNNA1-229ENST00000521683 KRTAP12-3P60328 96 aa2.96□□□□□ -1.94
CTNNA1-229ENST00000521683 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
CTNNA1-229ENST00000521683 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
CTNNA1-229ENST00000521683 SPRR5A0A1B0GTR4 108 aa2.94□□□□□ -1.94
CTNNA1-229ENST00000521683 SYNE1Q8NF91 8797 aaKnown RBP2.94□□□□□ -1.94
CTNNA1-229ENST00000521683 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
CTNNA1-229ENST00000521683 KRTAP12-4P60329 112 aa2.89□□□□□ -1.95
CTNNA1-229ENST00000521683 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
CTNNA1-229ENST00000521683 ROMO1P60602 79 aa2.83□□□□□ -1.96
CTNNA1-229ENST00000521683 KRTAP25-1Q3LHN0 102 aa2.82□□□□□ -1.96
CTNNA1-229ENST00000521683 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
CTNNA1-229ENST00000521683 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
CTNNA1-229ENST00000521683 AHNAKQ09666 5890 aaKnown RBP2.77□□□□□ -1.97
CTNNA1-229ENST00000521683 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
CTNNA1-229ENST00000521683 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
CTNNA1-229ENST00000521683 LCE3CQ5T5A8 94 aa2.71□□□□□ -1.98
CTNNA1-229ENST00000521683 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
CTNNA1-229ENST00000521683 MT1AP04731 61 aa2.69□□□□□ -1.98
CTNNA1-229ENST00000521683 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
CTNNA1-229ENST00000521683 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.98
CTNNA1-229ENST00000521683 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
CTNNA1-229ENST00000521683 KRTAP6-2Q3LI66 62 aa2.57□□□□□ -2
CTNNA1-229ENST00000521683 KRTAP9-6A8MVA2 160 aa2.56□□□□□ -2
CTNNA1-229ENST00000521683 LCE1EQ5T753 118 aa2.56□□□□□ -2
CTNNA1-229ENST00000521683 LUZP6Q538Z0 58 aa2.4□□□□□ -2.03
CTNNA1-229ENST00000521683 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
CTNNA1-229ENST00000521683 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
CTNNA1-229ENST00000521683 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
CTNNA1-229ENST00000521683 INE1O15225 51 aa2.06□□□□□ -2.08
CTNNA1-229ENST00000521683 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
CTNNA1-229ENST00000521683 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
CTNNA1-229ENST00000521683 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
CTNNA1-229ENST00000521683 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.14
CTNNA1-229ENST00000521683 PRM1P04553 51 aa1.43□□□□□ -2.18
CTNNA1-229ENST00000521683 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
CTNNA1-229ENST00000521683 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 93.9 ms