RNA–Protein interactions for RNA: ENST00000521403.1

CERNA3-201, Transcript of competing endogenous lncRNA 3 for miR-645, humanhuman

TSL 3 BASIC

Gene CERNA3, Length 557 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA3-201ENST00000521403 TNP1P09430 55 aa6.9□□□□□ -1.3
CERNA3-201ENST00000521403 LINC01558Q9Y6Z2 57 aa6.85□□□□□ -1.31
CERNA3-201ENST00000521403 PRR15LQ9BU68 103 aa6.83□□□□□ -1.32
CERNA3-201ENST00000521403 TMEM258P61165 79 aa6.82□□□□□ -1.32
CERNA3-201ENST00000521403 KRTAP5-4Q6L8H1 288 aa6.8□□□□□ -1.32
CERNA3-201ENST00000521403 AHNAK2Q8IVF2 5795 aa6.77□□□□□ -1.33
CERNA3-201ENST00000521403 KRTAP4-6Q9BYQ5 205 aa6.75□□□□□ -1.33
CERNA3-201ENST00000521403 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
CERNA3-201ENST00000521403 KRTAP12-3P60328 96 aa6.66□□□□□ -1.34
CERNA3-201ENST00000521403 KRTAP5-10Q6L8G5 202 aa6.66□□□□□ -1.34
CERNA3-201ENST00000521403 UQCR11O14957 56 aa6.63□□□□□ -1.35
CERNA3-201ENST00000521403 MIR22HGQ0VDD5 57 aa6.52□□□□□ -1.37
CERNA3-201ENST00000521403 PSPHP1O15172 72 aa6.47□□□□□ -1.37
CERNA3-201ENST00000521403 KRTAP5-3Q6L8H2 238 aa6.47□□□□□ -1.37
CERNA3-201ENST00000521403 V9GYY9 64 aa6.47□□□□□ -1.37
CERNA3-201ENST00000521403 KRTAP20-2Q3LI61 65 aa6.46□□□□□ -1.38
CERNA3-201ENST00000521403 KRTAP5-5Q701N2 237 aaPredicted RBP6.45□□□□□ -1.38
CERNA3-201ENST00000521403 KRTAP5-7Q6L8G8 165 aa6.42□□□□□ -1.38
CERNA3-201ENST00000521403 Q1T7F1 81 aa6.4□□□□□ -1.38
CERNA3-201ENST00000521403 SPRR5A0A1B0GTR4 108 aa6.38□□□□□ -1.39
CERNA3-201ENST00000521403 KRTAP25-1Q3LHN0 102 aa6.38□□□□□ -1.39
CERNA3-201ENST00000521403 KRTAP12-4P60329 112 aa6.37□□□□□ -1.39
CERNA3-201ENST00000521403 LOC100996750A0A140TA64 210 aa6.35□□□□□ -1.39
CERNA3-201ENST00000521403 K7ERS5 55 aa6.34□□□□□ -1.39
CERNA3-201ENST00000521403 PCP4P48539 62 aa6.26□□□□□ -1.41
CERNA3-201ENST00000521403 SYNE1Q8NF91 8797 aaKnown RBP6.23□□□□□ -1.41
CERNA3-201ENST00000521403 A6NED7 52 aa6.2□□□□□ -1.42
CERNA3-201ENST00000521403 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
CERNA3-201ENST00000521403 RPS28P62857 69 aaKnown RBP6.17□□□□□ -1.42
CERNA3-201ENST00000521403 KRTAP15-1Q3LI76 137 aa6.14□□□□□ -1.43
CERNA3-201ENST00000521403 LCE3CQ5T5A8 94 aa6.1□□□□□ -1.43
CERNA3-201ENST00000521403 KRTAP23-1A1A580 65 aa6.09□□□□□ -1.43
CERNA3-201ENST00000521403 CDC42SE1Q9NRR8 79 aa6.02□□□□□ -1.45
CERNA3-201ENST00000521403 ROMO1P60602 79 aa5.96□□□□□ -1.46
CERNA3-201ENST00000521403 MT1AP04731 61 aa5.95□□□□□ -1.46
CERNA3-201ENST00000521403 KRTAP6-1Q3LI64 71 aa5.95□□□□□ -1.46
CERNA3-201ENST00000521403 KRTAP4-11Q9BYQ6 195 aa5.95□□□□□ -1.46
CERNA3-201ENST00000521403 KRTAP5-2Q701N4 177 aa5.92□□□□□ -1.46
CERNA3-201ENST00000521403 KRTAP9-4Q9BYQ2 154 aa5.78□□□□□ -1.48
CERNA3-201ENST00000521403 KRTAP9-6A8MVA2 160 aa5.76□□□□□ -1.49
CERNA3-201ENST00000521403 KRTAP5-8O75690 187 aa5.75□□□□□ -1.49
CERNA3-201ENST00000521403 KRTAP6-2Q3LI66 62 aa5.73□□□□□ -1.49
CERNA3-201ENST00000521403 OBSCNQ5VST9 7968 aa5.66□□□□□ -1.5
CERNA3-201ENST00000521403 AHNAKQ09666 5890 aaKnown RBP5.61□□□□□ -1.51
CERNA3-201ENST00000521403 MUC5ACP98088 5654 aa5.6□□□□□ -1.51
CERNA3-201ENST00000521403 MUC5BQ9HC84 5762 aaPredicted RBP5.57□□□□□ -1.52
CERNA3-201ENST00000521403 KRTAP9-9Q9BYP9 154 aa5.52□□□□□ -1.53
CERNA3-201ENST00000521403 BRK1Q8WUW1 75 aa5.5□□□□□ -1.53
CERNA3-201ENST00000521403 MT3P25713 68 aa5.46□□□□□ -1.54
CERNA3-201ENST00000521403 KRTAP5-1Q6L8H4 278 aa5.36□□□□□ -1.55
CERNA3-201ENST00000521403 PMAIP1Q13794 54 aa5.18□□□□□ -1.58
CERNA3-201ENST00000521403 LCE1EQ5T753 118 aa5.04□□□□□ -1.6
CERNA3-201ENST00000521403 SVIPQ8NHG7 77 aa4.98□□□□□ -1.61
CERNA3-201ENST00000521403 PRAC1Q96KF2 57 aa4.94□□□□□ -1.62
CERNA3-201ENST00000521403 PRO0628Q9UI54 55 aa4.9□□□□□ -1.63
CERNA3-201ENST00000521403 LCE1BQ5T7P3 118 aa4.84□□□□□ -1.63
CERNA3-201ENST00000521403 KRTAP4-12Q9BQ66 201 aa4.83□□□□□ -1.64
CERNA3-201ENST00000521403 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
CERNA3-201ENST00000521403 LCE1CQ5T751 118 aa4.68□□□□□ -1.66
CERNA3-201ENST00000521403 KTN1-AS1Q86SY8 53 aa4.67□□□□□ -1.66
CERNA3-201ENST00000521403 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
CERNA3-201ENST00000521403 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
CERNA3-201ENST00000521403 LUZP6Q538Z0 58 aa4.24□□□□□ -1.73
CERNA3-201ENST00000521403 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
CERNA3-201ENST00000521403 H3BS24 57 aa4.19□□□□□ -1.74
CERNA3-201ENST00000521403 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
CERNA3-201ENST00000521403 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
CERNA3-201ENST00000521403 PHGR1C9JFL3 82 aa3.92□□□□□ -1.78
CERNA3-201ENST00000521403 KRTAP21-2Q3LI59 83 aa3.9□□□□□ -1.79
CERNA3-201ENST00000521403 A0A0A0MQY5 61 aa3.81□□□□□ -1.8
CERNA3-201ENST00000521403 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
CERNA3-201ENST00000521403 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
CERNA3-201ENST00000521403 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
CERNA3-201ENST00000521403 PRM1P04553 51 aa3.09□□□□□ -1.91
CERNA3-201ENST00000521403 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
CERNA3-201ENST00000521403 INE1O15225 51 aa2.83□□□□□ -1.96
CERNA3-201ENST00000521403 MUC16Q8WXI7 14507 aa2.43□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 8.1 ms