RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 A0A1B0GU33 70 aa3.41□□□□□ -1.86
CTNNA1-227ENST00000521387 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
CTNNA1-227ENST00000521387 H0YAA0 97 aa3.4□□□□□ -1.87
CTNNA1-227ENST00000521387 KRTAP10-5P60370 271 aa3.4□□□□□ -1.87
CTNNA1-227ENST00000521387 RBM12B-AS1Q9P1G2 102 aa3.39□□□□□ -1.87
CTNNA1-227ENST00000521387 MT1BP07438 61 aa3.38□□□□□ -1.87
CTNNA1-227ENST00000521387 KRTAP5-7Q6L8G8 165 aa3.35□□□□□ -1.87
CTNNA1-227ENST00000521387 KTN1-AS1Q86SY8 53 aa3.35□□□□□ -1.87
CTNNA1-227ENST00000521387 P0C880 135 aa3.34□□□□□ -1.87
CTNNA1-227ENST00000521387 KRTAP13-4Q3LI77 160 aa3.33□□□□□ -1.88
CTNNA1-227ENST00000521387 CSAG1Q6PB30 78 aa3.33□□□□□ -1.88
CTNNA1-227ENST00000521387 ADM2Q7Z4H4 148 aa3.32□□□□□ -1.88
CTNNA1-227ENST00000521387 PRAC1Q96KF2 57 aa3.28□□□□□ -1.88
CTNNA1-227ENST00000521387 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
CTNNA1-227ENST00000521387 A0A0D9SG42 100 aa3.26□□□□□ -1.89
CTNNA1-227ENST00000521387 K7ERS5 55 aa3.22□□□□□ -1.89
CTNNA1-227ENST00000521387 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
CTNNA1-227ENST00000521387 M0QZ58 72 aa3.21□□□□□ -1.9
CTNNA1-227ENST00000521387 KRTAP8-1Q8IUC2 63 aa3.21□□□□□ -1.9
CTNNA1-227ENST00000521387 KRTAP12-1P59990 96 aa3.2□□□□□ -1.9
CTNNA1-227ENST00000521387 KRTAP12-2P59991 146 aa3.2□□□□□ -1.9
CTNNA1-227ENST00000521387 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
CTNNA1-227ENST00000521387 ROMO1P60602 79 aa3.16□□□□□ -1.9
CTNNA1-227ENST00000521387 SPINT4Q6UDR6 99 aa3.16□□□□□ -1.9
CTNNA1-227ENST00000521387 CRIPTQ9P021 101 aa3.14□□□□□ -1.91
CTNNA1-227ENST00000521387 R4GN34 69 aa3.14□□□□□ -1.91
CTNNA1-227ENST00000521387 LINC01554Q52M75 96 aa3.13□□□□□ -1.91
CTNNA1-227ENST00000521387 MT4P47944 62 aa3.12□□□□□ -1.91
CTNNA1-227ENST00000521387 KRTAP25-1Q3LHN0 102 aa3.12□□□□□ -1.91
CTNNA1-227ENST00000521387 SPRR2GQ9BYE4 73 aa3.1□□□□□ -1.91
CTNNA1-227ENST00000521387 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.92
CTNNA1-227ENST00000521387 OBSCNQ5VST9 7968 aa3.08□□□□□ -1.92
CTNNA1-227ENST00000521387 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
CTNNA1-227ENST00000521387 KRTAP4-3Q9BYR4 195 aa3.06□□□□□ -1.92
CTNNA1-227ENST00000521387 C10orf95Q9H7T3 257 aa3.06□□□□□ -1.92
CTNNA1-227ENST00000521387 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
CTNNA1-227ENST00000521387 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
CTNNA1-227ENST00000521387 MT1XP80297 61 aa2.98□□□□□ -1.93
CTNNA1-227ENST00000521387 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
CTNNA1-227ENST00000521387 CAMK2N1Q7Z7J9 78 aa2.96□□□□□ -1.94
CTNNA1-227ENST00000521387 KRTAP10-12P60413 245 aa2.94□□□□□ -1.94
CTNNA1-227ENST00000521387 PLAC4Q8WY50 150 aa2.91□□□□□ -1.94
CTNNA1-227ENST00000521387 MT3P25713 68 aa2.9□□□□□ -1.95
CTNNA1-227ENST00000521387 TNP1P09430 55 aa2.86□□□□□ -1.95
CTNNA1-227ENST00000521387 PRO2289Q9P1D8 64 aa2.86□□□□□ -1.95
CTNNA1-227ENST00000521387 PP632Q6XCG6 107 aa2.83□□□□□ -1.96
CTNNA1-227ENST00000521387 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
CTNNA1-227ENST00000521387 KRTAP19-3Q7Z4W3 81 aa2.77□□□□□ -1.97
CTNNA1-227ENST00000521387 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
CTNNA1-227ENST00000521387 LCE3AQ5TA76 89 aa2.75□□□□□ -1.97
CTNNA1-227ENST00000521387 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
CTNNA1-227ENST00000521387 KRTAP19-7Q3SYF9 63 aa2.69□□□□□ -1.98
CTNNA1-227ENST00000521387 MT1EP04732 61 aa2.68□□□□□ -1.98
CTNNA1-227ENST00000521387 LCE3CQ5T5A8 94 aa2.67□□□□□ -1.98
CTNNA1-227ENST00000521387 NDUFAF8A1L188 74 aa2.66□□□□□ -1.98
CTNNA1-227ENST00000521387 SYNE1Q8NF91 8797 aaKnown RBP2.62□□□□□ -1.99
CTNNA1-227ENST00000521387 MT1GP13640 62 aa2.61□□□□□ -1.99
CTNNA1-227ENST00000521387 KRTAP12-3P60328 96 aa2.61□□□□□ -1.99
CTNNA1-227ENST00000521387 MT1MQ8N339 61 aa2.59□□□□□ -1.99
CTNNA1-227ENST00000521387 KRTAP19-5Q3LI72 72 aa2.57□□□□□ -2
CTNNA1-227ENST00000521387 LUZP6Q538Z0 58 aa2.55□□□□□ -2
CTNNA1-227ENST00000521387 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
CTNNA1-227ENST00000521387 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
CTNNA1-227ENST00000521387 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
CTNNA1-227ENST00000521387 MT1LQ93083 61 aa2.43□□□□□ -2.02
CTNNA1-227ENST00000521387 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
CTNNA1-227ENST00000521387 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
CTNNA1-227ENST00000521387 INE1O15225 51 aa2.15□□□□□ -2.07
CTNNA1-227ENST00000521387 KRTAP6-2Q3LI66 62 aa2.14□□□□□ -2.07
CTNNA1-227ENST00000521387 KRTAP6-1Q3LI64 71 aa2.11□□□□□ -2.07
CTNNA1-227ENST00000521387 MT1AP04731 61 aa2.04□□□□□ -2.08
CTNNA1-227ENST00000521387 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
CTNNA1-227ENST00000521387 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
CTNNA1-227ENST00000521387 LCE3DQ9BYE3 92 aa1.86□□□□□ -2.11
CTNNA1-227ENST00000521387 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
CTNNA1-227ENST00000521387 PRM1P04553 51 aa1.68□□□□□ -2.14
CTNNA1-227ENST00000521387 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
CTNNA1-227ENST00000521387 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 102.7 ms