RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 LCE5AQ5TCM9 118 aa5□□□□□ -1.61
CTNNA1-226ENST00000521368 MT1GP13640 62 aa4.95□□□□□ -1.62
CTNNA1-226ENST00000521368 KRTAP23-1A1A580 65 aa4.94□□□□□ -1.62
CTNNA1-226ENST00000521368 ROMO1P60602 79 aa4.93□□□□□ -1.62
CTNNA1-226ENST00000521368 MT1LQ93083 61 aa4.93□□□□□ -1.62
CTNNA1-226ENST00000521368 KRTAP12-3P60328 96 aa4.92□□□□□ -1.62
CTNNA1-226ENST00000521368 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
CTNNA1-226ENST00000521368 PP632Q6XCG6 107 aa4.91□□□□□ -1.62
CTNNA1-226ENST00000521368 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
CTNNA1-226ENST00000521368 KRTAP2-1Q9BYU5 128 aa4.91□□□□□ -1.62
CTNNA1-226ENST00000521368 MT1MQ8N339 61 aa4.84□□□□□ -1.63
CTNNA1-226ENST00000521368 BRK1Q8WUW1 75 aa4.79□□□□□ -1.64
CTNNA1-226ENST00000521368 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-226ENST00000521368 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
CTNNA1-226ENST00000521368 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
CTNNA1-226ENST00000521368 KRTAP4-3Q9BYR4 195 aa4.68□□□□□ -1.66
CTNNA1-226ENST00000521368 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
CTNNA1-226ENST00000521368 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
CTNNA1-226ENST00000521368 PMAIP1Q13794 54 aa4.52□□□□□ -1.69
CTNNA1-226ENST00000521368 LCE4AQ5TA78 99 aa4.52□□□□□ -1.69
CTNNA1-226ENST00000521368 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
CTNNA1-226ENST00000521368 KRTAP4-9Q9BYQ8 210 aa4.46□□□□□ -1.7
CTNNA1-226ENST00000521368 KRTAP5-5Q701N2 237 aaPredicted RBP4.44□□□□□ -1.7
CTNNA1-226ENST00000521368 SVIPQ8NHG7 77 aa4.43□□□□□ -1.7
CTNNA1-226ENST00000521368 LCE1DQ5T752 114 aa4.42□□□□□ -1.7
CTNNA1-226ENST00000521368 PRO0628Q9UI54 55 aa4.42□□□□□ -1.7
CTNNA1-226ENST00000521368 LOC100996750A0A140TA64 210 aa4.4□□□□□ -1.71
CTNNA1-226ENST00000521368 MT4P47944 62 aa4.38□□□□□ -1.71
CTNNA1-226ENST00000521368 HMCN1Q96RW7 5635 aa4.32□□□□□ -1.72
CTNNA1-226ENST00000521368 KRTAP4-6Q9BYQ5 205 aa4.3□□□□□ -1.72
CTNNA1-226ENST00000521368 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
CTNNA1-226ENST00000521368 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
CTNNA1-226ENST00000521368 KRTAP12-4P60329 112 aa4.25□□□□□ -1.73
CTNNA1-226ENST00000521368 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
CTNNA1-226ENST00000521368 MT1AP04731 61 aa4.21□□□□□ -1.74
CTNNA1-226ENST00000521368 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.74
CTNNA1-226ENST00000521368 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
CTNNA1-226ENST00000521368 KTN1-AS1Q86SY8 53 aa4.17□□□□□ -1.74
CTNNA1-226ENST00000521368 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
CTNNA1-226ENST00000521368 KRTAP5-3Q6L8H2 238 aa4.08□□□□□ -1.76
CTNNA1-226ENST00000521368 GPR98Q8WXG9 6306 aa4.04□□□□□ -1.76
CTNNA1-226ENST00000521368 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
CTNNA1-226ENST00000521368 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.76
CTNNA1-226ENST00000521368 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
CTNNA1-226ENST00000521368 KRTAP5-2Q701N4 177 aa3.98□□□□□ -1.77
CTNNA1-226ENST00000521368 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
CTNNA1-226ENST00000521368 MT3P25713 68 aa3.84□□□□□ -1.79
CTNNA1-226ENST00000521368 KRTAP5-7Q6L8G8 165 aa3.81□□□□□ -1.8
CTNNA1-226ENST00000521368 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
CTNNA1-226ENST00000521368 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
CTNNA1-226ENST00000521368 OBSCNQ5VST9 7968 aa3.64□□□□□ -1.83
CTNNA1-226ENST00000521368 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
CTNNA1-226ENST00000521368 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
CTNNA1-226ENST00000521368 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
CTNNA1-226ENST00000521368 H3BS24 57 aa3.5□□□□□ -1.85
CTNNA1-226ENST00000521368 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
CTNNA1-226ENST00000521368 KRTAP9-9Q9BYP9 154 aa3.4□□□□□ -1.87
CTNNA1-226ENST00000521368 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
CTNNA1-226ENST00000521368 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
CTNNA1-226ENST00000521368 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
CTNNA1-226ENST00000521368 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
CTNNA1-226ENST00000521368 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
CTNNA1-226ENST00000521368 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
CTNNA1-226ENST00000521368 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.89
CTNNA1-226ENST00000521368 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
CTNNA1-226ENST00000521368 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
CTNNA1-226ENST00000521368 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
CTNNA1-226ENST00000521368 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
CTNNA1-226ENST00000521368 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
CTNNA1-226ENST00000521368 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
CTNNA1-226ENST00000521368 A0A0A0MQY5 61 aa2.67□□□□□ -1.98
CTNNA1-226ENST00000521368 INE1O15225 51 aa2.58□□□□□ -2
CTNNA1-226ENST00000521368 PRM1P04553 51 aa2.53□□□□□ -2
CTNNA1-226ENST00000521368 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
CTNNA1-226ENST00000521368 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
CTNNA1-226ENST00000521368 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
CTNNA1-226ENST00000521368 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
CTNNA1-226ENST00000521368 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 473.4 ms