RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 CAMK2N1Q7Z7J9 78 aa6□□□□□ -1.45
TRAM1-204ENST00000521049 AHNAK2Q8IVF2 5795 aa5.99□□□□□ -1.45
TRAM1-204ENST00000521049 ATP5EP56381 51 aaPredicted RBP5.97□□□□□ -1.45
TRAM1-204ENST00000521049 KRTAP5-10Q6L8G5 202 aa5.96□□□□□ -1.46
TRAM1-204ENST00000521049 PP632Q6XCG6 107 aa5.95□□□□□ -1.46
TRAM1-204ENST00000521049 A0A1B0GU33 70 aa5.91□□□□□ -1.46
TRAM1-204ENST00000521049 A0A1B0GU69 56 aa5.89□□□□□ -1.47
TRAM1-204ENST00000521049 TMEM258P61165 79 aa5.89□□□□□ -1.47
TRAM1-204ENST00000521049 KRTAP19-5Q3LI72 72 aa5.89□□□□□ -1.47
TRAM1-204ENST00000521049 KRTAP5-4Q6L8H1 288 aa5.88□□□□□ -1.47
TRAM1-204ENST00000521049 SPATA8Q6RVD6 105 aa5.87□□□□□ -1.47
TRAM1-204ENST00000521049 MT1MQ8N339 61 aa5.87□□□□□ -1.47
TRAM1-204ENST00000521049 A0A0D9SG42 100 aa5.86□□□□□ -1.47
TRAM1-204ENST00000521049 KRTAP5-7Q6L8G8 165 aa5.8□□□□□ -1.48
TRAM1-204ENST00000521049 MT1LQ93083 61 aa5.79□□□□□ -1.48
TRAM1-204ENST00000521049 PRR15LQ9BU68 103 aa5.77□□□□□ -1.49
TRAM1-204ENST00000521049 SPINT4Q6UDR6 99 aa5.76□□□□□ -1.49
TRAM1-204ENST00000521049 LINC01558Q9Y6Z2 57 aa5.76□□□□□ -1.49
TRAM1-204ENST00000521049 SMIM26A0A096LP01 95 aa5.74□□□□□ -1.49
TRAM1-204ENST00000521049 KRTAP4-3Q9BYR4 195 aa5.73□□□□□ -1.49
TRAM1-204ENST00000521049 KRTAP12-1P59990 96 aa5.72□□□□□ -1.49
TRAM1-204ENST00000521049 A8MU10 97 aa5.69□□□□□ -1.5
TRAM1-204ENST00000521049 UQCR11O14957 56 aa5.58□□□□□ -1.52
TRAM1-204ENST00000521049 C10orf95Q9H7T3 257 aa5.57□□□□□ -1.52
TRAM1-204ENST00000521049 KRTAP20-2Q3LI61 65 aa5.56□□□□□ -1.52
TRAM1-204ENST00000521049 V9GYY9 64 aa5.54□□□□□ -1.52
TRAM1-204ENST00000521049 LCE3AQ5TA76 89 aa5.52□□□□□ -1.53
TRAM1-204ENST00000521049 SPRR5A0A1B0GTR4 108 aa5.51□□□□□ -1.53
TRAM1-204ENST00000521049 Q1T7F1 81 aa5.51□□□□□ -1.53
TRAM1-204ENST00000521049 PSPHP1O15172 72 aa5.49□□□□□ -1.53
TRAM1-204ENST00000521049 MIR22HGQ0VDD5 57 aa5.48□□□□□ -1.53
TRAM1-204ENST00000521049 KRTAP5-5Q701N2 237 aaPredicted RBP5.44□□□□□ -1.54
TRAM1-204ENST00000521049 TNP1P09430 55 aa5.43□□□□□ -1.54
TRAM1-204ENST00000521049 KRTAP12-4P60329 112 aa5.42□□□□□ -1.54
TRAM1-204ENST00000521049 RPS28P62857 69 aaKnown RBP5.39□□□□□ -1.55
TRAM1-204ENST00000521049 K7ERS5 55 aa5.34□□□□□ -1.55
TRAM1-204ENST00000521049 KRTAP12-3P60328 96 aa5.33□□□□□ -1.56
TRAM1-204ENST00000521049 SYNE1Q8NF91 8797 aaKnown RBP5.31□□□□□ -1.56
TRAM1-204ENST00000521049 A6NED7 52 aa5.31□□□□□ -1.56
TRAM1-204ENST00000521049 PRAC1Q96KF2 57 aa5.29□□□□□ -1.56
TRAM1-204ENST00000521049 MT3P25713 68 aa5.25□□□□□ -1.57
TRAM1-204ENST00000521049 KRTAP25-1Q3LHN0 102 aa5.2□□□□□ -1.58
TRAM1-204ENST00000521049 CDC42SE1Q9NRR8 79 aa5.1□□□□□ -1.59
TRAM1-204ENST00000521049 KRTAP5-2Q701N4 177 aa5.06□□□□□ -1.6
TRAM1-204ENST00000521049 AHNAKQ09666 5890 aaKnown RBP5.06□□□□□ -1.6
TRAM1-204ENST00000521049 KRTAP5-8O75690 187 aa5.03□□□□□ -1.6
TRAM1-204ENST00000521049 MUC5ACP98088 5654 aa5.02□□□□□ -1.61
TRAM1-204ENST00000521049 ROMO1P60602 79 aa5.01□□□□□ -1.61
TRAM1-204ENST00000521049 MUC5BQ9HC84 5762 aaPredicted RBP5□□□□□ -1.61
TRAM1-204ENST00000521049 NDUFAF8A1L188 74 aa4.98□□□□□ -1.61
TRAM1-204ENST00000521049 MT1AP04731 61 aa4.92□□□□□ -1.62
TRAM1-204ENST00000521049 KRTAP6-1Q3LI64 71 aa4.91□□□□□ -1.62
TRAM1-204ENST00000521049 LCE3CQ5T5A8 94 aa4.87□□□□□ -1.63
TRAM1-204ENST00000521049 OBSCNQ5VST9 7968 aa4.84□□□□□ -1.63
TRAM1-204ENST00000521049 KRTAP6-2Q3LI66 62 aa4.78□□□□□ -1.64
TRAM1-204ENST00000521049 BRK1Q8WUW1 75 aa4.77□□□□□ -1.65
TRAM1-204ENST00000521049 LCE1FQ5T754 118 aa4.73□□□□□ -1.65
TRAM1-204ENST00000521049 LCE1EQ5T753 118 aa4.71□□□□□ -1.66
TRAM1-204ENST00000521049 KRTAP5-1Q6L8H4 278 aa4.63□□□□□ -1.67
TRAM1-204ENST00000521049 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.62□□□□□ -1.67
TRAM1-204ENST00000521049 KRTAP9-6A8MVA2 160 aa4.59□□□□□ -1.67
TRAM1-204ENST00000521049 KRTAP5-11Q6L8G4 156 aa4.59□□□□□ -1.67
TRAM1-204ENST00000521049 PMAIP1Q13794 54 aa4.49□□□□□ -1.69
TRAM1-204ENST00000521049 PRO0628Q9UI54 55 aa4.31□□□□□ -1.72
TRAM1-204ENST00000521049 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
TRAM1-204ENST00000521049 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
TRAM1-204ENST00000521049 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
TRAM1-204ENST00000521049 LCE1CQ5T751 118 aa3.98□□□□□ -1.77
TRAM1-204ENST00000521049 KRTAP4-4Q9BYR3 166 aa3.89□□□□□ -1.79
TRAM1-204ENST00000521049 LUZP6Q538Z0 58 aa3.6□□□□□ -1.83
TRAM1-204ENST00000521049 PHGR1C9JFL3 82 aa3.48□□□□□ -1.85
TRAM1-204ENST00000521049 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
TRAM1-204ENST00000521049 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
TRAM1-204ENST00000521049 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
TRAM1-204ENST00000521049 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
TRAM1-204ENST00000521049 PRM1P04553 51 aa2.57□□□□□ -2
TRAM1-204ENST00000521049 INE1O15225 51 aa2.47□□□□□ -2.01
TRAM1-204ENST00000521049 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 67 ms