RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 TNP1P09430 55 aa3.83□□□□□ -1.8
PVT1-209ENST00000520913 ATP5EP56381 51 aaPredicted RBP3.83□□□□□ -1.8
PVT1-209ENST00000520913 MT1MQ8N339 61 aa3.83□□□□□ -1.8
PVT1-209ENST00000520913 LCE3AQ5TA76 89 aa3.82□□□□□ -1.8
PVT1-209ENST00000520913 MT1LQ93083 61 aa3.82□□□□□ -1.8
PVT1-209ENST00000520913 PRR15LQ9BU68 103 aa3.82□□□□□ -1.8
PVT1-209ENST00000520913 GPR98Q8WXG9 6306 aa3.82□□□□□ -1.8
PVT1-209ENST00000520913 C10orf95Q9H7T3 257 aa3.8□□□□□ -1.8
PVT1-209ENST00000520913 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
PVT1-209ENST00000520913 CCDC179H3BU77 68 aa3.78□□□□□ -1.8
PVT1-209ENST00000520913 LCE4AQ5TA78 99 aa3.77□□□□□ -1.81
PVT1-209ENST00000520913 LINC01558Q9Y6Z2 57 aa3.74□□□□□ -1.81
PVT1-209ENST00000520913 MT4P47944 62 aa3.72□□□□□ -1.81
PVT1-209ENST00000520913 KRTAP4-3Q9BYR4 195 aa3.7□□□□□ -1.82
PVT1-209ENST00000520913 UQCR11O14957 56 aa3.69□□□□□ -1.82
PVT1-209ENST00000520913 AHNAK2Q8IVF2 5795 aa3.68□□□□□ -1.82
PVT1-209ENST00000520913 TMEM258P61165 79 aa3.68□□□□□ -1.82
PVT1-209ENST00000520913 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
PVT1-209ENST00000520913 KRTAP12-3P60328 96 aa3.66□□□□□ -1.82
PVT1-209ENST00000520913 KRTAP25-1Q3LHN0 102 aa3.59□□□□□ -1.83
PVT1-209ENST00000520913 MIR22HGQ0VDD5 57 aa3.58□□□□□ -1.84
PVT1-209ENST00000520913 K7ERS5 55 aa3.56□□□□□ -1.84
PVT1-209ENST00000520913 PCP4P48539 62 aa3.55□□□□□ -1.84
PVT1-209ENST00000520913 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
PVT1-209ENST00000520913 KRTAP5-5Q701N2 237 aaPredicted RBP3.51□□□□□ -1.85
PVT1-209ENST00000520913 V9GYY9 64 aa3.5□□□□□ -1.85
PVT1-209ENST00000520913 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
PVT1-209ENST00000520913 SVIPQ8NHG7 77 aa3.48□□□□□ -1.85
PVT1-209ENST00000520913 KRTAP19-4Q3LI73 84 aa3.47□□□□□ -1.85
PVT1-209ENST00000520913 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
PVT1-209ENST00000520913 PSPHP1O15172 72 aa3.46□□□□□ -1.86
PVT1-209ENST00000520913 KRTAP23-1A1A580 65 aa3.44□□□□□ -1.86
PVT1-209ENST00000520913 KRTAP12-4P60329 112 aa3.44□□□□□ -1.86
PVT1-209ENST00000520913 Q1T7F1 81 aa3.44□□□□□ -1.86
PVT1-209ENST00000520913 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
PVT1-209ENST00000520913 KRTAP15-1Q3LI76 137 aa3.4□□□□□ -1.87
PVT1-209ENST00000520913 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.87
PVT1-209ENST00000520913 A6NED7 52 aa3.37□□□□□ -1.87
PVT1-209ENST00000520913 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
PVT1-209ENST00000520913 CDC42SE1Q9NRR8 79 aa3.35□□□□□ -1.87
PVT1-209ENST00000520913 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
PVT1-209ENST00000520913 ROMO1P60602 79 aa3.28□□□□□ -1.88
PVT1-209ENST00000520913 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
PVT1-209ENST00000520913 MT1AP04731 61 aa3.26□□□□□ -1.89
PVT1-209ENST00000520913 RPS28P62857 69 aaKnown RBP3.26□□□□□ -1.89
PVT1-209ENST00000520913 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
PVT1-209ENST00000520913 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
PVT1-209ENST00000520913 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
PVT1-209ENST00000520913 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
PVT1-209ENST00000520913 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
PVT1-209ENST00000520913 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.91
PVT1-209ENST00000520913 KRTAP5-8O75690 187 aa3.07□□□□□ -1.92
PVT1-209ENST00000520913 MUC5BQ9HC84 5762 aaPredicted RBP3.04□□□□□ -1.92
PVT1-209ENST00000520913 AHNAKQ09666 5890 aaKnown RBP3.02□□□□□ -1.93
PVT1-209ENST00000520913 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
PVT1-209ENST00000520913 MT3P25713 68 aa2.98□□□□□ -1.93
PVT1-209ENST00000520913 PRO0628Q9UI54 55 aa2.92□□□□□ -1.94
PVT1-209ENST00000520913 BRK1Q8WUW1 75 aa2.8□□□□□ -1.96
PVT1-209ENST00000520913 H3BS24 57 aa2.75□□□□□ -1.97
PVT1-209ENST00000520913 PMAIP1Q13794 54 aa2.75□□□□□ -1.97
PVT1-209ENST00000520913 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
PVT1-209ENST00000520913 KTN1-AS1Q86SY8 53 aa2.65□□□□□ -1.99
PVT1-209ENST00000520913 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
PVT1-209ENST00000520913 LCE1CQ5T751 118 aa2.55□□□□□ -2
PVT1-209ENST00000520913 PRAC1Q96KF2 57 aa2.53□□□□□ -2
PVT1-209ENST00000520913 A0A0A0MQY5 61 aa2.43□□□□□ -2.02
PVT1-209ENST00000520913 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
PVT1-209ENST00000520913 LCE1FQ5T754 118 aa2.28□□□□□ -2.04
PVT1-209ENST00000520913 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
PVT1-209ENST00000520913 LUZP6Q538Z0 58 aa2.19□□□□□ -2.06
PVT1-209ENST00000520913 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
PVT1-209ENST00000520913 NDUFAF8A1L188 74 aa2.09□□□□□ -2.07
PVT1-209ENST00000520913 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
PVT1-209ENST00000520913 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
PVT1-209ENST00000520913 INE1O15225 51 aa1.81□□□□□ -2.12
PVT1-209ENST00000520913 PRM1P04553 51 aa1.67□□□□□ -2.14
PVT1-209ENST00000520913 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
PVT1-209ENST00000520913 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms