RNA–Protein interactions for RNA: ENST00000520320.5

IKBKB-215, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, human

TSL 5

Gene IKBKB, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IKBKB-215	ENST00000520320	LCE4A	Q5TA78	99 aa		4.42	□□□□□ -1.7
IKBKB-215	ENST00000520320	AHNAK2	Q8IVF2	5795 aa		4.42	□□□□□ -1.7
IKBKB-215	ENST00000520320	PP632	Q6XCG6	107 aa		4.4	□□□□□ -1.71
IKBKB-215	ENST00000520320		Q1T7F1	81 aa		4.39	□□□□□ -1.71
IKBKB-215	ENST00000520320	MT1M	Q8N339	61 aa		4.36	□□□□□ -1.71
IKBKB-215	ENST00000520320	UQCR11	O14957	56 aa		4.35	□□□□□ -1.71
IKBKB-215	ENST00000520320	TNP1	P09430	55 aa		4.32	□□□□□ -1.72
IKBKB-215	ENST00000520320	KRTAP4-3	Q9BYR4	195 aa		4.32	□□□□□ -1.72
IKBKB-215	ENST00000520320	KRTAP5-10	Q6L8G5	202 aa		4.31	□□□□□ -1.72
IKBKB-215	ENST00000520320	MT1L	Q93083	61 aa		4.31	□□□□□ -1.72
IKBKB-215	ENST00000520320	C10orf95	Q9H7T3	257 aa		4.31	□□□□□ -1.72
IKBKB-215	ENST00000520320	KRTAP4-6	Q9BYQ5	205 aa		4.3	□□□□□ -1.72
IKBKB-215	ENST00000520320	KRTAP5-4	Q6L8H1	288 aa		4.27	□□□□□ -1.73
IKBKB-215	ENST00000520320	PSPHP1	O15172	72 aa		4.25	□□□□□ -1.73
IKBKB-215	ENST00000520320	MIR22HG	Q0VDD5	57 aa		4.25	□□□□□ -1.73
IKBKB-215	ENST00000520320	LCE3A	Q5TA76	89 aa		4.23	□□□□□ -1.73
IKBKB-215	ENST00000520320		A6NED7	52 aa		4.2	□□□□□ -1.74
IKBKB-215	ENST00000520320		K7ERS5	55 aa		4.2	□□□□□ -1.74
IKBKB-215	ENST00000520320	KRTAP5-7	Q6L8G8	165 aa		4.17	□□□□□ -1.74
IKBKB-215	ENST00000520320	KRTAP5-3	Q6L8H2	238 aa		4.16	□□□□□ -1.74
IKBKB-215	ENST00000520320	KRTAP25-1	Q3LHN0	102 aa		4.13	□□□□□ -1.75
IKBKB-215	ENST00000520320	KRTAP4-7	Q9BYR0	210 aa		4.13	□□□□□ -1.75
IKBKB-215	ENST00000520320	CDC42SE1	Q9NRR8	79 aa		4.11	□□□□□ -1.75
IKBKB-215	ENST00000520320	KRTAP12-3	P60328	96 aa		4.09	□□□□□ -1.75
IKBKB-215	ENST00000520320	KRTAP20-2	Q3LI61	65 aa		4.08	□□□□□ -1.76
IKBKB-215	ENST00000520320	SPRR5	A0A1B0GTR4	108 aa		4.06	□□□□□ -1.76
IKBKB-215	ENST00000520320	BRK1	Q8WUW1	75 aa		4.06	□□□□□ -1.76
IKBKB-215	ENST00000520320	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.99	□□□□□ -1.77
IKBKB-215	ENST00000520320	KRTAP23-1	A1A580	65 aa		3.98	□□□□□ -1.77
IKBKB-215	ENST00000520320	KRTAP12-4	P60329	112 aa		3.98	□□□□□ -1.77
IKBKB-215	ENST00000520320	PRO0628	Q9UI54	55 aa		3.96	□□□□□ -1.78
IKBKB-215	ENST00000520320	LOC100996750	A0A140TA64	210 aa		3.93	□□□□□ -1.78
IKBKB-215	ENST00000520320	SYNE1	Q8NF91	8797 aa	Known RBP	3.93	□□□□□ -1.78
IKBKB-215	ENST00000520320	KRTAP19-4	Q3LI73	84 aa		3.91	□□□□□ -1.78
IKBKB-215	ENST00000520320	ROMO1	P60602	79 aa		3.89	□□□□□ -1.79
IKBKB-215	ENST00000520320	PMAIP1	Q13794	54 aa		3.86	□□□□□ -1.79
IKBKB-215	ENST00000520320	KRTAP15-1	Q3LI76	137 aa		3.86	□□□□□ -1.79
IKBKB-215	ENST00000520320	KRTAP4-11	Q9BYQ6	195 aa		3.79	□□□□□ -1.8
IKBKB-215	ENST00000520320	LCE3C	Q5T5A8	94 aa		3.77	□□□□□ -1.81
IKBKB-215	ENST00000520320	KRTAP5-2	Q701N4	177 aa		3.7	□□□□□ -1.82
IKBKB-215	ENST00000520320	AHNAK	Q09666	5890 aa	Known RBP	3.69	□□□□□ -1.82
IKBKB-215	ENST00000520320	KRTAP6-1	Q3LI64	71 aa		3.68	□□□□□ -1.82
IKBKB-215	ENST00000520320	KTN1-AS1	Q86SY8	53 aa		3.68	□□□□□ -1.82
IKBKB-215	ENST00000520320	KRTAP5-8	O75690	187 aa		3.66	□□□□□ -1.82
IKBKB-215	ENST00000520320	MT1A	P04731	61 aa		3.66	□□□□□ -1.82
IKBKB-215	ENST00000520320	MUC5AC	P98088	5654 aa		3.66	□□□□□ -1.82
IKBKB-215	ENST00000520320	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.63	□□□□□ -1.83
IKBKB-215	ENST00000520320	OBSCN	Q5VST9	7968 aa		3.61	□□□□□ -1.83
IKBKB-215	ENST00000520320	KRTAP6-2	Q3LI66	62 aa		3.57	□□□□□ -1.84
IKBKB-215	ENST00000520320	KRTAP9-4	Q9BYQ2	154 aa		3.56	□□□□□ -1.84
IKBKB-215	ENST00000520320	KRTAP9-9	Q9BYP9	154 aa		3.54	□□□□□ -1.84
IKBKB-215	ENST00000520320	KRTAP9-6	A8MVA2	160 aa		3.52	□□□□□ -1.85
IKBKB-215	ENST00000520320	PRAC1	Q96KF2	57 aa		3.49	□□□□□ -1.85
IKBKB-215	ENST00000520320	SVIP	Q8NHG7	77 aa		3.48	□□□□□ -1.85
IKBKB-215	ENST00000520320	KRTAP5-1	Q6L8H4	278 aa		3.37	□□□□□ -1.87
IKBKB-215	ENST00000520320	MT3	P25713	68 aa		3.35	□□□□□ -1.87
IKBKB-215	ENST00000520320	LCE1E	Q5T753	118 aa		3.11	□□□□□ -1.91
IKBKB-215	ENST00000520320	LUZP6	Q538Z0	58 aa		3.09	□□□□□ -1.91
IKBKB-215	ENST00000520320	LCE1B	Q5T7P3	118 aa		3.04	□□□□□ -1.92
IKBKB-215	ENST00000520320	KRTAP4-2	Q9BYR5	136 aa		2.99	□□□□□ -1.93
IKBKB-215	ENST00000520320	LCE1C	Q5T751	118 aa		2.89	□□□□□ -1.95
IKBKB-215	ENST00000520320	KRTAP4-12	Q9BQ66	201 aa		2.87	□□□□□ -1.95
IKBKB-215	ENST00000520320	NDUFAF8	A1L188	74 aa		2.79	□□□□□ -1.96
IKBKB-215	ENST00000520320	LCE3D	Q9BYE3	92 aa		2.74	□□□□□ -1.97
IKBKB-215	ENST00000520320	KRTAP5-11	Q6L8G4	156 aa		2.65	□□□□□ -1.99
IKBKB-215	ENST00000520320	LCE1F	Q5T754	118 aa		2.62	□□□□□ -1.99
IKBKB-215	ENST00000520320		A0A0A0MQY5	61 aa		2.59	□□□□□ -1.99
IKBKB-215	ENST00000520320	LCE3E	Q5T5B0	92 aa		2.59	□□□□□ -1.99
IKBKB-215	ENST00000520320	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.58	□□□□□ -2
IKBKB-215	ENST00000520320	PHGR1	C9JFL3	82 aa		2.55	□□□□□ -2
IKBKB-215	ENST00000520320	INE1	O15225	51 aa		2.44	□□□□□ -2.02
IKBKB-215	ENST00000520320	KRTAP21-2	Q3LI59	83 aa		2.41	□□□□□ -2.02
IKBKB-215	ENST00000520320	KRTAP4-4	Q9BYR3	166 aa		2.31	□□□□□ -2.04
IKBKB-215	ENST00000520320		H3BS24	57 aa		2.29	□□□□□ -2.04
IKBKB-215	ENST00000520320	MUC19	Q7Z5P9	8384 aa		2.26	□□□□□ -2.05
IKBKB-215	ENST00000520320	PRM1	P04553	51 aa		1.98	□□□□□ -2.09
IKBKB-215	ENST00000520320	KRTAP21-1	Q3LI58	79 aa		1.91	□□□□□ -2.1
IKBKB-215	ENST00000520320	MUC16	Q8WXI7	14507 aa		1.57	□□□□□ -2.16

Retrieved 78 of 20,778 RNA–protein pairs in 87.3 ms