RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 C10orf95Q9H7T3 257 aa8.9□□□□□ -0.98
VEGFA-220ENST00000519767 PRR15LQ9BU68 103 aa8.85□□□□□ -0.99
VEGFA-220ENST00000519767 HMCN1Q96RW7 5635 aa8.84□□□□□ -0.99
VEGFA-220ENST00000519767 MT4P47944 62 aa8.8□□□□□ -1
VEGFA-220ENST00000519767 LINC01558Q9Y6Z2 57 aa8.78□□□□□ -1
VEGFA-220ENST00000519767 KRTAP4-3Q9BYR4 195 aa8.73□□□□□ -1.01
VEGFA-220ENST00000519767 KRTAP5-4Q6L8H1 288 aa8.71□□□□□ -1.02
VEGFA-220ENST00000519767 KRTAP12-3P60328 96 aa8.61□□□□□ -1.03
VEGFA-220ENST00000519767 RPS28P62857 69 aaKnown RBP8.56□□□□□ -1.04
VEGFA-220ENST00000519767 UQCR11O14957 56 aa8.54□□□□□ -1.04
VEGFA-220ENST00000519767 KRTAP4-6Q9BYQ5 205 aa8.54□□□□□ -1.04
VEGFA-220ENST00000519767 AHNAK2Q8IVF2 5795 aa8.52□□□□□ -1.05
VEGFA-220ENST00000519767 KRTAP4-7Q9BYR0 210 aa8.49□□□□□ -1.05
VEGFA-220ENST00000519767 V9GYY9 64 aa8.46□□□□□ -1.06
VEGFA-220ENST00000519767 Q1T7F1 81 aa8.41□□□□□ -1.06
VEGFA-220ENST00000519767 KRTAP5-10Q6L8G5 202 aa8.4□□□□□ -1.06
VEGFA-220ENST00000519767 KRTAP25-1Q3LHN0 102 aa8.37□□□□□ -1.07
VEGFA-220ENST00000519767 PSPHP1O15172 72 aa8.34□□□□□ -1.07
VEGFA-220ENST00000519767 MIR22HGQ0VDD5 57 aa8.34□□□□□ -1.07
VEGFA-220ENST00000519767 KRTAP5-5Q701N2 237 aaPredicted RBP8.27□□□□□ -1.09
VEGFA-220ENST00000519767 K7ERS5 55 aa8.25□□□□□ -1.09
VEGFA-220ENST00000519767 KRTAP19-4Q3LI73 84 aa8.25□□□□□ -1.09
VEGFA-220ENST00000519767 SPRR5A0A1B0GTR4 108 aa8.21□□□□□ -1.1
VEGFA-220ENST00000519767 KRTAP20-2Q3LI61 65 aa8.21□□□□□ -1.1
VEGFA-220ENST00000519767 KRTAP12-4P60329 112 aa8.18□□□□□ -1.1
VEGFA-220ENST00000519767 KRTAP5-3Q6L8H2 238 aa8.17□□□□□ -1.1
VEGFA-220ENST00000519767 KRTAP5-7Q6L8G8 165 aa8.12□□□□□ -1.11
VEGFA-220ENST00000519767 KRTAP23-1A1A580 65 aa8.09□□□□□ -1.11
VEGFA-220ENST00000519767 A6NED7 52 aa8.08□□□□□ -1.12
VEGFA-220ENST00000519767 LOC100996750A0A140TA64 210 aa8.05□□□□□ -1.12
VEGFA-220ENST00000519767 KRTAP15-1Q3LI76 137 aa7.99□□□□□ -1.13
VEGFA-220ENST00000519767 SYNE1Q8NF91 8797 aaKnown RBP7.95□□□□□ -1.14
VEGFA-220ENST00000519767 LCE3CQ5T5A8 94 aa7.92□□□□□ -1.14
VEGFA-220ENST00000519767 CDC42SE1Q9NRR8 79 aa7.81□□□□□ -1.16
VEGFA-220ENST00000519767 MT1AP04731 61 aa7.65□□□□□ -1.18
VEGFA-220ENST00000519767 BRK1Q8WUW1 75 aa7.64□□□□□ -1.19
VEGFA-220ENST00000519767 ROMO1P60602 79 aa7.63□□□□□ -1.19
VEGFA-220ENST00000519767 KRTAP6-1Q3LI64 71 aa7.6□□□□□ -1.19
VEGFA-220ENST00000519767 KRTAP5-2Q701N4 177 aa7.58□□□□□ -1.2
VEGFA-220ENST00000519767 KRTAP4-11Q9BYQ6 195 aa7.57□□□□□ -1.2
VEGFA-220ENST00000519767 KRTAP9-4Q9BYQ2 154 aa7.45□□□□□ -1.22
VEGFA-220ENST00000519767 KRTAP9-6A8MVA2 160 aa7.4□□□□□ -1.22
VEGFA-220ENST00000519767 KRTAP6-2Q3LI66 62 aa7.31□□□□□ -1.24
VEGFA-220ENST00000519767 PRO0628Q9UI54 55 aa7.31□□□□□ -1.24
VEGFA-220ENST00000519767 KRTAP5-8O75690 187 aa7.29□□□□□ -1.24
VEGFA-220ENST00000519767 PMAIP1Q13794 54 aa7.22□□□□□ -1.25
VEGFA-220ENST00000519767 OBSCNQ5VST9 7968 aa7.13□□□□□ -1.27
VEGFA-220ENST00000519767 AHNAKQ09666 5890 aaKnown RBP7.11□□□□□ -1.27
VEGFA-220ENST00000519767 MUC5ACP98088 5654 aa7.09□□□□□ -1.28
VEGFA-220ENST00000519767 MUC5BQ9HC84 5762 aaPredicted RBP7.08□□□□□ -1.28
VEGFA-220ENST00000519767 MT3P25713 68 aa7.06□□□□□ -1.28
VEGFA-220ENST00000519767 KRTAP9-9Q9BYP9 154 aa7□□□□□ -1.29
VEGFA-220ENST00000519767 KRTAP5-1Q6L8H4 278 aa6.83□□□□□ -1.32
VEGFA-220ENST00000519767 KTN1-AS1Q86SY8 53 aa6.82□□□□□ -1.32
VEGFA-220ENST00000519767 PRAC1Q96KF2 57 aa6.77□□□□□ -1.33
VEGFA-220ENST00000519767 LCE1EQ5T753 118 aa6.55□□□□□ -1.36
VEGFA-220ENST00000519767 SVIPQ8NHG7 77 aa6.45□□□□□ -1.38
VEGFA-220ENST00000519767 KRTAP4-2Q9BYR5 136 aa6.12□□□□□ -1.43
VEGFA-220ENST00000519767 LCE1BQ5T7P3 118 aa6.11□□□□□ -1.43
VEGFA-220ENST00000519767 LCE1CQ5T751 118 aa6.06□□□□□ -1.44
VEGFA-220ENST00000519767 LCE3DQ9BYE3 92 aa5.69□□□□□ -1.5
VEGFA-220ENST00000519767 LUZP6Q538Z0 58 aa5.64□□□□□ -1.51
VEGFA-220ENST00000519767 KRTAP4-12Q9BQ66 201 aa5.6□□□□□ -1.51
VEGFA-220ENST00000519767 KRTAP5-11Q6L8G4 156 aa5.48□□□□□ -1.53
VEGFA-220ENST00000519767 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.48□□□□□ -1.53
VEGFA-220ENST00000519767 LCE1FQ5T754 118 aa5.43□□□□□ -1.54
VEGFA-220ENST00000519767 LCE3EQ5T5B0 92 aa5.31□□□□□ -1.56
VEGFA-220ENST00000519767 NDUFAF8A1L188 74 aa5.21□□□□□ -1.58
VEGFA-220ENST00000519767 KRTAP21-2Q3LI59 83 aa5.02□□□□□ -1.61
VEGFA-220ENST00000519767 PHGR1C9JFL3 82 aa4.9□□□□□ -1.63
VEGFA-220ENST00000519767 KRTAP4-4Q9BYR3 166 aa4.59□□□□□ -1.67
VEGFA-220ENST00000519767 A0A0A0MQY5 61 aa4.54□□□□□ -1.68
VEGFA-220ENST00000519767 H3BS24 57 aa4.46□□□□□ -1.7
VEGFA-220ENST00000519767 MUC19Q7Z5P9 8384 aa4.42□□□□□ -1.7
VEGFA-220ENST00000519767 INE1O15225 51 aa4.34□□□□□ -1.71
VEGFA-220ENST00000519767 PRM1P04553 51 aa3.91□□□□□ -1.78
VEGFA-220ENST00000519767 KRTAP21-1Q3LI58 79 aa3.77□□□□□ -1.81
VEGFA-220ENST00000519767 MUC16Q8WXI7 14507 aa3.09□□□□□ -1.92
Retrieved 78 of 20,778 RNA–protein pairs in 109.3 ms