RNA–Protein interactions for RNA: ENST00000519534.1

CHTF8-206, Transcript of chromosome transmission fidelity factor 8, human

TSL 2

Gene CHTF8, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHTF8-206	ENST00000519534	KRTAP23-1	A1A580	65 aa		4.12	□□□□□ -1.75
CHTF8-206	ENST00000519534	ROMO1	P60602	79 aa		4.12	□□□□□ -1.75
CHTF8-206	ENST00000519534	BRK1	Q8WUW1	75 aa		4.12	□□□□□ -1.75
CHTF8-206	ENST00000519534	SPRR2F	Q96RM1	72 aa		4.09	□□□□□ -1.75
CHTF8-206	ENST00000519534	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.08	□□□□□ -1.76
CHTF8-206	ENST00000519534	LCE3A	Q5TA76	89 aa		4.04	□□□□□ -1.76
CHTF8-206	ENST00000519534	KRTAP19-7	Q3SYF9	63 aa		4.03	□□□□□ -1.76
CHTF8-206	ENST00000519534	PP632	Q6XCG6	107 aa		4	□□□□□ -1.77
CHTF8-206	ENST00000519534	KRTAP19-5	Q3LI72	72 aa		3.99	□□□□□ -1.77
CHTF8-206	ENST00000519534	MUC12	Q9UKN1	5478 aa		3.99	□□□□□ -1.77
CHTF8-206	ENST00000519534	MT1E	P04732	61 aa		3.98	□□□□□ -1.77
CHTF8-206	ENST00000519534	LCE1A	Q5T7P2	110 aa		3.98	□□□□□ -1.77
CHTF8-206	ENST00000519534	SPRR2E	P22531	72 aa		3.95	□□□□□ -1.78
CHTF8-206	ENST00000519534	SPRR2B	P35325	72 aa		3.95	□□□□□ -1.78
CHTF8-206	ENST00000519534	SPRR2A	P35326	72 aa		3.95	□□□□□ -1.78
CHTF8-206	ENST00000519534	PRO0628	Q9UI54	55 aa		3.95	□□□□□ -1.78
CHTF8-206	ENST00000519534	KRTAP12-3	P60328	96 aa		3.94	□□□□□ -1.78
CHTF8-206	ENST00000519534	PMAIP1	Q13794	54 aa		3.94	□□□□□ -1.78
CHTF8-206	ENST00000519534	KRTAP5-11	Q6L8G4	156 aa		3.94	□□□□□ -1.78
CHTF8-206	ENST00000519534	NEB	P20929	6669 aa		3.92	□□□□□ -1.78
CHTF8-206	ENST00000519534	KRTAP19-3	Q7Z4W3	81 aa		3.91	□□□□□ -1.78
CHTF8-206	ENST00000519534	MDN1	Q9NU22	5596 aa		3.91	□□□□□ -1.78
CHTF8-206	ENST00000519534	MT1G	P13640	62 aa		3.89	□□□□□ -1.79
CHTF8-206	ENST00000519534	MT1L	Q93083	61 aa		3.85	□□□□□ -1.79
CHTF8-206	ENST00000519534	SPRR2D	P22532	72 aa		3.82	□□□□□ -1.8
CHTF8-206	ENST00000519534	KRTAP2-3	P0C7H8	128 aa		3.8	□□□□□ -1.8
CHTF8-206	ENST00000519534	KRTAP2-4	Q9BYR9	128 aa		3.8	□□□□□ -1.8
CHTF8-206	ENST00000519534	KRTAP20-1	Q3LI63	56 aa		3.76	□□□□□ -1.81
CHTF8-206	ENST00000519534	MT1M	Q8N339	61 aa		3.76	□□□□□ -1.81
CHTF8-206	ENST00000519534	SVIP	Q8NHG7	77 aa		3.75	□□□□□ -1.81
CHTF8-206	ENST00000519534	KRTAP2-2	Q9BYT5	123 aa		3.7	□□□□□ -1.82
CHTF8-206	ENST00000519534	KRTAP2-1	Q9BYU5	128 aa		3.7	□□□□□ -1.82
CHTF8-206	ENST00000519534	KTN1-AS1	Q86SY8	53 aa		3.68	□□□□□ -1.82
CHTF8-206	ENST00000519534	LCE3C	Q5T5A8	94 aa		3.67	□□□□□ -1.82
CHTF8-206	ENST00000519534	LCE1E	Q5T753	118 aa		3.66	□□□□□ -1.82
CHTF8-206	ENST00000519534	PRAC1	Q96KF2	57 aa		3.62	□□□□□ -1.83
CHTF8-206	ENST00000519534	KRTAP4-3	Q9BYR4	195 aa		3.59	□□□□□ -1.83
CHTF8-206	ENST00000519534	DST	Q03001	7570 aa	Known RBP	3.56	□□□□□ -1.84
CHTF8-206	ENST00000519534	KRTAP5-1	Q6L8H4	278 aa		3.5	□□□□□ -1.85
CHTF8-206	ENST00000519534	KRTAP5-4	Q6L8H1	288 aa		3.46	□□□□□ -1.86
CHTF8-206	ENST00000519534	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.46	□□□□□ -1.86
CHTF8-206	ENST00000519534	KRTAP9-6	A8MVA2	160 aa		3.39	□□□□□ -1.87
CHTF8-206	ENST00000519534	KRTAP4-4	Q9BYR3	166 aa		3.39	□□□□□ -1.87
CHTF8-206	ENST00000519534	SPRR5	A0A1B0GTR4	108 aa		3.38	□□□□□ -1.87
CHTF8-206	ENST00000519534	KRTAP12-4	P60329	112 aa		3.31	□□□□□ -1.88
CHTF8-206	ENST00000519534	MT1A	P04731	61 aa		3.3	□□□□□ -1.88
CHTF8-206	ENST00000519534	MT4	P47944	62 aa		3.28	□□□□□ -1.88
CHTF8-206	ENST00000519534	GPR98	Q8WXG9	6306 aa		3.24	□□□□□ -1.89
CHTF8-206	ENST00000519534	KRTAP6-1	Q3LI64	71 aa		3.22	□□□□□ -1.89
CHTF8-206	ENST00000519534	SYNE1	Q8NF91	8797 aa	Known RBP	3.22	□□□□□ -1.89
CHTF8-206	ENST00000519534	HMCN1	Q96RW7	5635 aa		3.21	□□□□□ -1.9
CHTF8-206	ENST00000519534	KRTAP20-2	Q3LI61	65 aa		3.2	□□□□□ -1.9
CHTF8-206	ENST00000519534	MT3	P25713	68 aa		3.17	□□□□□ -1.9
CHTF8-206	ENST00000519534	LUZP6	Q538Z0	58 aa		3.12	□□□□□ -1.91
CHTF8-206	ENST00000519534	KRTAP5-2	Q701N4	177 aa		3.08	□□□□□ -1.92
CHTF8-206	ENST00000519534	KRTAP6-2	Q3LI66	62 aa		3.02	□□□□□ -1.93
CHTF8-206	ENST00000519534	OBSCN	Q5VST9	7968 aa		2.99	□□□□□ -1.93
CHTF8-206	ENST00000519534	KRTAP5-10	Q6L8G5	202 aa		2.95	□□□□□ -1.94
CHTF8-206	ENST00000519534	AHNAK2	Q8IVF2	5795 aa		2.92	□□□□□ -1.94
CHTF8-206	ENST00000519534	LCE1F	Q5T754	118 aa		2.83	□□□□□ -1.96
CHTF8-206	ENST00000519534	KRTAP5-7	Q6L8G8	165 aa		2.81	□□□□□ -1.96
CHTF8-206	ENST00000519534	KRTAP5-8	O75690	187 aa		2.75	□□□□□ -1.97
CHTF8-206	ENST00000519534	NDUFAF8	A1L188	74 aa		2.74	□□□□□ -1.97
CHTF8-206	ENST00000519534	LCE3D	Q9BYE3	92 aa		2.72	□□□□□ -1.97
CHTF8-206	ENST00000519534	LCE3E	Q5T5B0	92 aa		2.61	□□□□□ -1.99
CHTF8-206	ENST00000519534	MUC5AC	P98088	5654 aa		2.54	□□□□□ -2
CHTF8-206	ENST00000519534	LCE1C	Q5T751	118 aa		2.54	□□□□□ -2
CHTF8-206	ENST00000519534	LCE1B	Q5T7P3	118 aa		2.54	□□□□□ -2
CHTF8-206	ENST00000519534	AHNAK	Q09666	5890 aa	Known RBP	2.5	□□□□□ -2.01
CHTF8-206	ENST00000519534		A0A0A0MQY5	61 aa		2.41	□□□□□ -2.02
CHTF8-206	ENST00000519534	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.39	□□□□□ -2.03
CHTF8-206	ENST00000519534	INE1	O15225	51 aa		2.37	□□□□□ -2.03
CHTF8-206	ENST00000519534	KRTAP21-2	Q3LI59	83 aa		2.15	□□□□□ -2.07
CHTF8-206	ENST00000519534	PRM1	P04553	51 aa		2.08	□□□□□ -2.08
CHTF8-206	ENST00000519534	MUC19	Q7Z5P9	8384 aa		1.98	□□□□□ -2.09
CHTF8-206	ENST00000519534	PHGR1	C9JFL3	82 aa		1.93	□□□□□ -2.1
CHTF8-206	ENST00000519534	KRTAP21-1	Q3LI58	79 aa		1.31	□□□□□ -2.2
CHTF8-206	ENST00000519534	MUC16	Q8WXI7	14507 aa		1.2	□□□□□ -2.22

Retrieved 78 of 20,778 RNA–protein pairs in 73 ms