RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 LCE5AQ5TCM9 118 aa8.19□□□□□ -1.1
SKP1-206ENST00000519321 MT1GP13640 62 aa8.11□□□□□ -1.11
SKP1-206ENST00000519321 ROMO1P60602 79 aa8.1□□□□□ -1.11
SKP1-206ENST00000519321 KRTAP2-2Q9BYT5 123 aa8.09□□□□□ -1.11
SKP1-206ENST00000519321 KRTAP2-1Q9BYU5 128 aa8.09□□□□□ -1.11
SKP1-206ENST00000519321 KRTAP23-1A1A580 65 aa8.08□□□□□ -1.12
SKP1-206ENST00000519321 KRTAP12-3P60328 96 aa8.08□□□□□ -1.12
SKP1-206ENST00000519321 LCE3BQ5TA77 95 aa8.08□□□□□ -1.12
SKP1-206ENST00000519321 PP632Q6XCG6 107 aa8.08□□□□□ -1.12
SKP1-206ENST00000519321 MT1LQ93083 61 aa8.07□□□□□ -1.12
SKP1-206ENST00000519321 MT1MQ8N339 61 aa7.94□□□□□ -1.14
SKP1-206ENST00000519321 BRK1Q8WUW1 75 aa7.85□□□□□ -1.15
SKP1-206ENST00000519321 KRTAP19-4Q3LI73 84 aa7.76□□□□□ -1.17
SKP1-206ENST00000519321 KRTAP15-1Q3LI76 137 aa7.7□□□□□ -1.18
SKP1-206ENST00000519321 KRTAP4-3Q9BYR4 195 aa7.67□□□□□ -1.18
SKP1-206ENST00000519321 DSTQ03001 7570 aaKnown RBP7.64□□□□□ -1.19
SKP1-206ENST00000519321 KRTAP4-7Q9BYR0 210 aa7.63□□□□□ -1.19
SKP1-206ENST00000519321 LCE3CQ5T5A8 94 aa7.48□□□□□ -1.21
SKP1-206ENST00000519321 LCE4AQ5TA78 99 aa7.44□□□□□ -1.22
SKP1-206ENST00000519321 PMAIP1Q13794 54 aa7.42□□□□□ -1.22
SKP1-206ENST00000519321 KRTAP4-9Q9BYQ8 210 aa7.36□□□□□ -1.23
SKP1-206ENST00000519321 KRTAP5-4Q6L8H1 288 aa7.33□□□□□ -1.24
SKP1-206ENST00000519321 LCE1DQ5T752 114 aa7.26□□□□□ -1.25
SKP1-206ENST00000519321 KRTAP5-5Q701N2 237 aaPredicted RBP7.24□□□□□ -1.25
SKP1-206ENST00000519321 MT4P47944 62 aa7.23□□□□□ -1.25
SKP1-206ENST00000519321 LOC100996750A0A140TA64 210 aa7.21□□□□□ -1.26
SKP1-206ENST00000519321 PRO0628Q9UI54 55 aa7.21□□□□□ -1.26
SKP1-206ENST00000519321 KRTAP4-6Q9BYQ5 205 aa7.06□□□□□ -1.28
SKP1-206ENST00000519321 KRTAP12-4P60329 112 aa7.01□□□□□ -1.29
SKP1-206ENST00000519321 HMCN1Q96RW7 5635 aa6.99□□□□□ -1.29
SKP1-206ENST00000519321 PRAC1Q96KF2 57 aa6.98□□□□□ -1.29
SKP1-206ENST00000519321 KRTAP9-6A8MVA2 160 aa6.97□□□□□ -1.29
SKP1-206ENST00000519321 SPRR5A0A1B0GTR4 108 aa6.95□□□□□ -1.3
SKP1-206ENST00000519321 MT1AP04731 61 aa6.89□□□□□ -1.31
SKP1-206ENST00000519321 KRTAP20-2Q3LI61 65 aa6.89□□□□□ -1.31
SKP1-206ENST00000519321 KTN1-AS1Q86SY8 53 aa6.81□□□□□ -1.32
SKP1-206ENST00000519321 KRTAP6-1Q3LI64 71 aa6.78□□□□□ -1.32
SKP1-206ENST00000519321 SYNE1Q8NF91 8797 aaKnown RBP6.77□□□□□ -1.33
SKP1-206ENST00000519321 KRTAP5-3Q6L8H2 238 aa6.66□□□□□ -1.34
SKP1-206ENST00000519321 GPR98Q8WXG9 6306 aa6.61□□□□□ -1.35
SKP1-206ENST00000519321 KRTAP9-4Q9BYQ2 154 aa6.61□□□□□ -1.35
SKP1-206ENST00000519321 AHNAK2Q8IVF2 5795 aa6.55□□□□□ -1.36
SKP1-206ENST00000519321 KRTAP5-10Q6L8G5 202 aa6.54□□□□□ -1.36
SKP1-206ENST00000519321 KRTAP5-2Q701N4 177 aa6.5□□□□□ -1.37
SKP1-206ENST00000519321 SVIPQ8NHG7 77 aa6.47□□□□□ -1.37
SKP1-206ENST00000519321 KRTAP6-2Q3LI66 62 aa6.41□□□□□ -1.38
SKP1-206ENST00000519321 MT3P25713 68 aa6.31□□□□□ -1.4
SKP1-206ENST00000519321 KRTAP5-7Q6L8G8 165 aa6.25□□□□□ -1.41
SKP1-206ENST00000519321 KRTAP4-11Q9BYQ6 195 aa6.19□□□□□ -1.42
SKP1-206ENST00000519321 KRTAP5-8O75690 187 aa5.96□□□□□ -1.46
SKP1-206ENST00000519321 LUZP6Q538Z0 58 aa5.95□□□□□ -1.46
SKP1-206ENST00000519321 OBSCNQ5VST9 7968 aa5.77□□□□□ -1.49
SKP1-206ENST00000519321 KRTAP5-1Q6L8H4 278 aa5.73□□□□□ -1.49
SKP1-206ENST00000519321 LCE1EQ5T753 118 aa5.7□□□□□ -1.5
SKP1-206ENST00000519321 KRTAP9-9Q9BYP9 154 aa5.63□□□□□ -1.51
SKP1-206ENST00000519321 LCE3DQ9BYE3 92 aa5.49□□□□□ -1.53
SKP1-206ENST00000519321 MUC5ACP98088 5654 aa5.48□□□□□ -1.53
SKP1-206ENST00000519321 MUC5BQ9HC84 5762 aaPredicted RBP5.32□□□□□ -1.56
SKP1-206ENST00000519321 LCE1BQ5T7P3 118 aa5.29□□□□□ -1.56
SKP1-206ENST00000519321 KRTAP4-2Q9BYR5 136 aa5.29□□□□□ -1.56
SKP1-206ENST00000519321 LCE1CQ5T751 118 aa5.27□□□□□ -1.57
SKP1-206ENST00000519321 LCE3EQ5T5B0 92 aa5.24□□□□□ -1.57
SKP1-206ENST00000519321 AHNAKQ09666 5890 aaKnown RBP5.22□□□□□ -1.57
SKP1-206ENST00000519321 NDUFAF8A1L188 74 aa5.08□□□□□ -1.6
SKP1-206ENST00000519321 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.86□□□□□ -1.63
SKP1-206ENST00000519321 KRTAP5-11Q6L8G4 156 aa4.74□□□□□ -1.65
SKP1-206ENST00000519321 KRTAP4-12Q9BQ66 201 aa4.66□□□□□ -1.66
SKP1-206ENST00000519321 LCE1FQ5T754 118 aa4.55□□□□□ -1.68
SKP1-206ENST00000519321 KRTAP21-2Q3LI59 83 aa4.47□□□□□ -1.69
SKP1-206ENST00000519321 H3BS24 57 aa4.33□□□□□ -1.72
SKP1-206ENST00000519321 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
SKP1-206ENST00000519321 INE1O15225 51 aa4.23□□□□□ -1.73
SKP1-206ENST00000519321 PRM1P04553 51 aa4.14□□□□□ -1.75
SKP1-206ENST00000519321 PHGR1C9JFL3 82 aa4.07□□□□□ -1.76
SKP1-206ENST00000519321 KRTAP4-4Q9BYR3 166 aa3.99□□□□□ -1.77
SKP1-206ENST00000519321 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
SKP1-206ENST00000519321 KRTAP21-1Q3LI58 79 aa2.91□□□□□ -1.94
SKP1-206ENST00000519321 MUC16Q8WXI7 14507 aa2.62□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 59.4 ms