RNA–Protein interactions for RNA: ENST00000518310.5

TCEA1-203, Transcript of transcription elongation factor A1, humanhuman

TSL 4

Gene TCEA1, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-203ENST00000518310 Q1T7F1 81 aa7.56□□□□□ -1.2
TCEA1-203ENST00000518310 LCE3AQ5TA76 89 aa7.56□□□□□ -1.2
TCEA1-203ENST00000518310 MIR22HGQ0VDD5 57 aa7.55□□□□□ -1.2
TCEA1-203ENST00000518310 LCE4AQ5TA78 99 aa7.54□□□□□ -1.2
TCEA1-203ENST00000518310 MT1GP13640 62 aa7.53□□□□□ -1.2
TCEA1-203ENST00000518310 RPS28P62857 69 aaKnown RBP7.52□□□□□ -1.21
TCEA1-203ENST00000518310 HMCN1Q96RW7 5635 aa7.51□□□□□ -1.21
TCEA1-203ENST00000518310 PSPHP1O15172 72 aa7.48□□□□□ -1.21
TCEA1-203ENST00000518310 PP632Q6XCG6 107 aa7.47□□□□□ -1.21
TCEA1-203ENST00000518310 MT1LQ93083 61 aa7.44□□□□□ -1.22
TCEA1-203ENST00000518310 MT4P47944 62 aa7.43□□□□□ -1.22
TCEA1-203ENST00000518310 AHNAK2Q8IVF2 5795 aa7.39□□□□□ -1.23
TCEA1-203ENST00000518310 MT1MQ8N339 61 aa7.38□□□□□ -1.23
TCEA1-203ENST00000518310 KRTAP5-10Q6L8G5 202 aa7.34□□□□□ -1.23
TCEA1-203ENST00000518310 KRTAP5-4Q6L8H1 288 aa7.34□□□□□ -1.23
TCEA1-203ENST00000518310 K7ERS5 55 aa7.33□□□□□ -1.24
TCEA1-203ENST00000518310 LOC100996750A0A140TA64 210 aa7.31□□□□□ -1.24
TCEA1-203ENST00000518310 KRTAP25-1Q3LHN0 102 aa7.31□□□□□ -1.24
TCEA1-203ENST00000518310 KRTAP4-6Q9BYQ5 205 aa7.31□□□□□ -1.24
TCEA1-203ENST00000518310 KRTAP12-3P60328 96 aa7.27□□□□□ -1.25
TCEA1-203ENST00000518310 A6NED7 52 aa7.21□□□□□ -1.26
TCEA1-203ENST00000518310 KRTAP4-3Q9BYR4 195 aa7.17□□□□□ -1.26
TCEA1-203ENST00000518310 KRTAP5-7Q6L8G8 165 aa7.12□□□□□ -1.27
TCEA1-203ENST00000518310 KRTAP23-1A1A580 65 aa7.1□□□□□ -1.27
TCEA1-203ENST00000518310 KRTAP4-7Q9BYR0 210 aa7.08□□□□□ -1.28
TCEA1-203ENST00000518310 KRTAP5-3Q6L8H2 238 aa7.05□□□□□ -1.28
TCEA1-203ENST00000518310 CDC42SE1Q9NRR8 79 aa6.99□□□□□ -1.29
TCEA1-203ENST00000518310 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
TCEA1-203ENST00000518310 ROMO1P60602 79 aa6.92□□□□□ -1.3
TCEA1-203ENST00000518310 KRTAP20-2Q3LI61 65 aa6.92□□□□□ -1.3
TCEA1-203ENST00000518310 SPRR5A0A1B0GTR4 108 aa6.88□□□□□ -1.31
TCEA1-203ENST00000518310 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
TCEA1-203ENST00000518310 KRTAP5-5Q701N2 237 aaPredicted RBP6.85□□□□□ -1.31
TCEA1-203ENST00000518310 KRTAP12-4P60329 112 aa6.74□□□□□ -1.33
TCEA1-203ENST00000518310 LCE3CQ5T5A8 94 aa6.73□□□□□ -1.33
TCEA1-203ENST00000518310 PRO0628Q9UI54 55 aa6.71□□□□□ -1.34
TCEA1-203ENST00000518310 BRK1Q8WUW1 75 aa6.7□□□□□ -1.34
TCEA1-203ENST00000518310 SYNE1Q8NF91 8797 aaKnown RBP6.54□□□□□ -1.36
TCEA1-203ENST00000518310 KRTAP4-11Q9BYQ6 195 aa6.42□□□□□ -1.38
TCEA1-203ENST00000518310 KRTAP9-6A8MVA2 160 aa6.38□□□□□ -1.39
TCEA1-203ENST00000518310 KRTAP5-2Q701N4 177 aa6.36□□□□□ -1.39
TCEA1-203ENST00000518310 MT1AP04731 61 aa6.34□□□□□ -1.39
TCEA1-203ENST00000518310 PMAIP1Q13794 54 aa6.33□□□□□ -1.4
TCEA1-203ENST00000518310 KRTAP6-1Q3LI64 71 aa6.29□□□□□ -1.4
TCEA1-203ENST00000518310 KRTAP5-8O75690 187 aa6.23□□□□□ -1.41
TCEA1-203ENST00000518310 KRTAP4-12Q9BQ66 201 aa6.2□□□□□ -1.42
TCEA1-203ENST00000518310 KRTAP9-9Q9BYP9 154 aa6.19□□□□□ -1.42
TCEA1-203ENST00000518310 KRTAP9-4Q9BYQ2 154 aa6.19□□□□□ -1.42
TCEA1-203ENST00000518310 MUC5ACP98088 5654 aa6.16□□□□□ -1.42
TCEA1-203ENST00000518310 AHNAKQ09666 5890 aaKnown RBP6.12□□□□□ -1.43
TCEA1-203ENST00000518310 KTN1-AS1Q86SY8 53 aa6.11□□□□□ -1.43
TCEA1-203ENST00000518310 MUC5BQ9HC84 5762 aaPredicted RBP6.11□□□□□ -1.43
TCEA1-203ENST00000518310 KRTAP6-2Q3LI66 62 aa5.98□□□□□ -1.45
TCEA1-203ENST00000518310 PRAC1Q96KF2 57 aa5.94□□□□□ -1.46
TCEA1-203ENST00000518310 OBSCNQ5VST9 7968 aa5.91□□□□□ -1.46
TCEA1-203ENST00000518310 MT3P25713 68 aa5.77□□□□□ -1.49
TCEA1-203ENST00000518310 KRTAP5-1Q6L8H4 278 aa5.76□□□□□ -1.49
TCEA1-203ENST00000518310 KRTAP4-2Q9BYR5 136 aa5.7□□□□□ -1.5
TCEA1-203ENST00000518310 LCE1EQ5T753 118 aa5.39□□□□□ -1.55
TCEA1-203ENST00000518310 H3BS24 57 aa5.36□□□□□ -1.55
TCEA1-203ENST00000518310 LCE1BQ5T7P3 118 aa5□□□□□ -1.61
TCEA1-203ENST00000518310 LCE1CQ5T751 118 aa4.99□□□□□ -1.61
TCEA1-203ENST00000518310 LUZP6Q538Z0 58 aa4.97□□□□□ -1.61
TCEA1-203ENST00000518310 LCE3DQ9BYE3 92 aa4.87□□□□□ -1.63
TCEA1-203ENST00000518310 NDUFAF8A1L188 74 aa4.77□□□□□ -1.65
TCEA1-203ENST00000518310 A0A0A0MQY5 61 aa4.63□□□□□ -1.67
TCEA1-203ENST00000518310 LCE3EQ5T5B0 92 aa4.61□□□□□ -1.67
TCEA1-203ENST00000518310 KRTAP5-11Q6L8G4 156 aa4.58□□□□□ -1.68
TCEA1-203ENST00000518310 LCE1FQ5T754 118 aa4.57□□□□□ -1.68
TCEA1-203ENST00000518310 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.53□□□□□ -1.68
TCEA1-203ENST00000518310 PHGR1C9JFL3 82 aa4.26□□□□□ -1.73
TCEA1-203ENST00000518310 INE1O15225 51 aa4.23□□□□□ -1.73
TCEA1-203ENST00000518310 KRTAP21-2Q3LI59 83 aa4.17□□□□□ -1.74
TCEA1-203ENST00000518310 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
TCEA1-203ENST00000518310 MUC19Q7Z5P9 8384 aa3.68□□□□□ -1.82
TCEA1-203ENST00000518310 PRM1P04553 51 aa3.54□□□□□ -1.84
TCEA1-203ENST00000518310 KRTAP21-1Q3LI58 79 aa3.27□□□□□ -1.89
TCEA1-203ENST00000518310 MUC16Q8WXI7 14507 aa2.61□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 79.2 ms