RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 ATMQ13315 3056 aa-1.59□□□□□ -2.66
RNU6-840P-201ENST00000517275 FRYLO94915 3013 aa-1.6□□□□□ -2.67
RNU6-840P-201ENST00000517275 FREM2Q5SZK8 3169 aa-1.61□□□□□ -2.67
RNU6-840P-201ENST00000517275 MYO15AQ9UKN7 3530 aa-1.62□□□□□ -2.67
RNU6-840P-201ENST00000517275 MT1BP07438 61 aa-1.64□□□□□ -2.67
RNU6-840P-201ENST00000517275 ABCA13Q86UQ4 5058 aa-1.72□□□□□ -2.68
RNU6-840P-201ENST00000517275 PCNTO95613 3336 aa-1.76□□□□□ -2.69
RNU6-840P-201ENST00000517275 CEP250Q9BV73 2442 aa-1.77□□□□□ -2.69
RNU6-840P-201ENST00000517275 DMDP11532 3685 aa-1.78□□□□□ -2.69
RNU6-840P-201ENST00000517275 RPS29P62273 56 aaKnown RBP-1.79□□□□□ -2.7
RNU6-840P-201ENST00000517275 WDFY3Q8IZQ1 3526 aa-1.8□□□□□ -2.7
RNU6-840P-201ENST00000517275 IQGAP2Q13576 1575 aa-1.82□□□□□ -2.7
RNU6-840P-201ENST00000517275 BOD1L1Q8NFC6 3051 aa-1.83□□□□□ -2.7
RNU6-840P-201ENST00000517275 SAMD9LQ8IVG5 1584 aa-1.83□□□□□ -2.7
RNU6-840P-201ENST00000517275 TOMM5Q8N4H5 51 aa-1.83□□□□□ -2.7
RNU6-840P-201ENST00000517275 TOMM7Q9P0U1 55 aa-1.83□□□□□ -2.7
RNU6-840P-201ENST00000517275 LINC01590Q5TEZ4 76 aa-1.84□□□□□ -2.7
RNU6-840P-201ENST00000517275 CEP350Q5VT06 3117 aa-1.84□□□□□ -2.7
RNU6-840P-201ENST00000517275 SZT2Q5T011 3432 aa-1.85□□□□□ -2.71
RNU6-840P-201ENST00000517275 ATP7AQ04656 1500 aa-1.86□□□□□ -2.71
RNU6-840P-201ENST00000517275 DNAH12Q6ZR08 3092 aa-1.88□□□□□ -2.71
RNU6-840P-201ENST00000517275 WDFY4Q6ZS81 3184 aa-1.9□□□□□ -2.71
RNU6-840P-201ENST00000517275 MT1FP04733 61 aa-1.92□□□□□ -2.72
RNU6-840P-201ENST00000517275 RPL39P62891 51 aaKnown RBP-1.92□□□□□ -2.72
RNU6-840P-201ENST00000517275 MUC3AQ02505 3323 aa-1.94□□□□□ -2.72
RNU6-840P-201ENST00000517275 DUOX1Q9NRD9 1551 aa-1.96□□□□□ -2.72
RNU6-840P-201ENST00000517275 RHPN1-AS1Q9BWJ2 59 aa-1.97□□□□□ -2.72
RNU6-840P-201ENST00000517275 SPEGQ15772 3267 aa-1.99□□□□□ -2.73
RNU6-840P-201ENST00000517275 MKI67P46013 3256 aaKnown RBP-2.03□□□□□ -2.73
RNU6-840P-201ENST00000517275 KRTAP20-1Q3LI63 56 aa-2.04□□□□□ -2.74
RNU6-840P-201ENST00000517275 RPL39LQ96EH5 51 aaKnown RBP-2.05□□□□□ -2.74
RNU6-840P-201ENST00000517275 CENPEQ02224 2701 aa-2.09□□□□□ -2.74
RNU6-840P-201ENST00000517275 EP400Q96L91 3159 aa-2.11□□□□□ -2.75
RNU6-840P-201ENST00000517275 TOP2AP11388 1531 aaKnown RBP-2.12□□□□□ -2.75
RNU6-840P-201ENST00000517275 XIRP2A4UGR9 3374 aa-2.12□□□□□ -2.75
RNU6-840P-201ENST00000517275 DEFB133Q30KQ1 61 aa-2.12□□□□□ -2.75
RNU6-840P-201ENST00000517275 MROH2BQ7Z745 1585 aa-2.15□□□□□ -2.75
RNU6-840P-201ENST00000517275 DCHS1Q96JQ0 3298 aa-2.15□□□□□ -2.75
RNU6-840P-201ENST00000517275 A0A096LNI7 61 aa-2.18□□□□□ -2.76
RNU6-840P-201ENST00000517275 DEFB124Q8NES8 71 aa-2.2□□□□□ -2.76
RNU6-840P-201ENST00000517275 LOC400499M0QZD8 3231 aa-2.23□□□□□ -2.77
RNU6-840P-201ENST00000517275 HTN1P15515 57 aa-2.25□□□□□ -2.77
RNU6-840P-201ENST00000517275 UNC80Q8N2C7 3258 aa-2.26□□□□□ -2.77
RNU6-840P-201ENST00000517275 USP34Q70CQ2 3546 aa-2.28□□□□□ -2.77
RNU6-840P-201ENST00000517275 CD52P31358 61 aa-2.28□□□□□ -2.77
RNU6-840P-201ENST00000517275 TTTY10Q9BZA0 68 aa-2.29□□□□□ -2.78
RNU6-840P-201ENST00000517275 CFAP47Q6ZTR5 3102 aa-2.29□□□□□ -2.78
RNU6-840P-201ENST00000517275 DEFB104AQ8WTQ1 72 aa-2.32□□□□□ -2.78
RNU6-840P-201ENST00000517275 H3BUX3 64 aa-2.37□□□□□ -2.79
RNU6-840P-201ENST00000517275 DNAH14Q0VDD8 3507 aa-2.37□□□□□ -2.79
RNU6-840P-201ENST00000517275 SNRPGP62308 76 aaKnown RBP-2.39□□□□□ -2.79
RNU6-840P-201ENST00000517275 ASPMQ8IZT6 3477 aa-2.39□□□□□ -2.79
RNU6-840P-201ENST00000517275 K7EIM0 57 aa-2.4□□□□□ -2.79
RNU6-840P-201ENST00000517275 KRTAP19-2Q3LHN2 52 aa-2.45□□□□□ -2.8
RNU6-840P-201ENST00000517275 KRTAP19-6Q3LI70 58 aa-2.47□□□□□ -2.8
RNU6-840P-201ENST00000517275 BRCA2P51587 3418 aa-2.49□□□□□ -2.81
RNU6-840P-201ENST00000517275 GCC2Q8IWJ2 1684 aa-2.55□□□□□ -2.82
RNU6-840P-201ENST00000517275 ARHGAP5-AS1Q96IT6 56 aa-2.57□□□□□ -2.82
RNU6-840P-201ENST00000517275 PRCDQ00LT1 54 aa-2.59□□□□□ -2.82
RNU6-840P-201ENST00000517275 VCANP13611 3396 aa-2.64□□□□□ -2.83
RNU6-840P-201ENST00000517275 LINC01556Q5JQF7 62 aa-2.65□□□□□ -2.83
RNU6-840P-201ENST00000517275 CDH23Q9H251 3354 aa-2.71□□□□□ -2.84
RNU6-840P-201ENST00000517275 CENPFP49454 3210 aa-2.75□□□□□ -2.85
RNU6-840P-201ENST00000517275 TMEM167AQ8TBQ9 72 aa-2.77□□□□□ -2.85
RNU6-840P-201ENST00000517275 VPS13AQ96RL7 3174 aa-2.79□□□□□ -2.86
RNU6-840P-201ENST00000517275 A0A096LPF7 62 aa-2.92□□□□□ -2.88
RNU6-840P-201ENST00000517275 APELAP0DMC3 54 aa-2.98□□□□□ -2.89
RNU6-840P-201ENST00000517275 RPL39P5Q59GN2 51 aa-2.99□□□□□ -2.89
RNU6-840P-201ENST00000517275 H3BSH0 61 aa-3.02□□□□□ -2.89
RNU6-840P-201ENST00000517275 UTRNP46939 3433 aa-3.05□□□□□ -2.9
RNU6-840P-201ENST00000517275 DEFB108AA8MXU0 73 aa-3.09□□□□□ -2.9
RNU6-840P-201ENST00000517275 Q9Y3F1 56 aa-3.15□□□□□ -2.91
RNU6-840P-201ENST00000517275 HTN3P15516 51 aa-3.28□□□□□ -2.93
RNU6-840P-201ENST00000517275 GOLGB1Q14789 3259 aaKnown RBP-3.29□□□□□ -2.94
RNU6-840P-201ENST00000517275 COX14Q96I36 57 aa-3.52□□□□□ -2.97
RNU6-840P-201ENST00000517275 DEFB108BQ8NET1 73 aa-3.64□□□□□ -2.99
RNU6-840P-201ENST00000517275 STATHP02808 62 aa-4.15□□□□□ -3.07
Retrieved 77 of 20,778 RNA–protein pairs in 7.8 ms