RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 KRTAP19-7Q3SYF9 63 aa0.01□□□□□ -2.41
SCARNA16.2-201ENST00000516520 LINC01556Q5JQF7 62 aa0.01□□□□□ -2.41
SCARNA16.2-201ENST00000516520 FAT3Q8TDW7 4589 aa0.01□□□□□ -2.41
SCARNA16.2-201ENST00000516520 LAMA2P24043 3122 aaKnown RBP0□□□□□ -2.41
SCARNA16.2-201ENST00000516520 FREM2Q5SZK8 3169 aa0□□□□□ -2.41
SCARNA16.2-201ENST00000516520 SRCAPQ6ZRS2 3230 aa0□□□□□ -2.41
SCARNA16.2-201ENST00000516520 DEFB4AO15263 64 aa0□□□□□ -2.41
SCARNA16.2-201ENST00000516520 USH2AO75445 5202 aa0□□□□□ -2.41
SCARNA16.2-201ENST00000516520 APELAP0DMC3 54 aa0□□□□□ -2.41
SCARNA16.2-201ENST00000516520 KRTAP19-8Q3LI54 63 aa0□□□□□ -2.41
SCARNA16.2-201ENST00000516520 KRTAP20-1Q3LI63 56 aa0□□□□□ -2.41
SCARNA16.2-201ENST00000516520 CSMD2Q7Z408 3487 aa0□□□□□ -2.41
SCARNA16.2-201ENST00000516520 AKAP9Q99996 3911 aa0□□□□□ -2.41
SCARNA16.2-201ENST00000516520 RYR3Q15413 4870 aa-0.01□□□□□ -2.41
SCARNA16.2-201ENST00000516520 HERC1Q15751 4861 aa-0.01□□□□□ -2.41
SCARNA16.2-201ENST00000516520 DNAH8Q96JB1 4490 aa-0.01□□□□□ -2.41
SCARNA16.2-201ENST00000516520 DNAH6Q9C0G6 4158 aa-0.01□□□□□ -2.41
SCARNA16.2-201ENST00000516520 KRTAP20-2Q3LI61 65 aa-0.01□□□□□ -2.41
SCARNA16.2-201ENST00000516520 APOBP04114 4563 aaKnown RBP-0.01□□□□□ -2.41
SCARNA16.2-201ENST00000516520 BOD1L1Q8NFC6 3051 aa-0.01□□□□□ -2.41
SCARNA16.2-201ENST00000516520 WDFY4Q6ZS81 3184 aa-0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 DNAH10Q8IVF4 4471 aa-0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 DNAH7Q8WXX0 4024 aa-0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 A0A096LPF7 62 aa-0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 MT2AP02795 61 aa-0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 MT1HL1P0DM35 61 aa-0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 MT4P47944 62 aa-0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 MT1MQ8N339 61 aa-0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 EYSQ5T1H1 3165 aa-0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 DNAH1Q9P2D7 4330 aa-0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 FAT1Q14517 4588 aa-0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 XIRP2A4UGR9 3374 aa-0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 MUC3AQ02505 3323 aa-0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 HERC2O95714 4834 aa-0.03□□□□□ -2.41
SCARNA16.2-201ENST00000516520 SZT2Q5T011 3432 aa-0.03□□□□□ -2.41
SCARNA16.2-201ENST00000516520 MKI67P46013 3256 aaKnown RBP-0.03□□□□□ -2.41
SCARNA16.2-201ENST00000516520 SMG1Q96Q15 3661 aaKnown RBP-0.03□□□□□ -2.41
SCARNA16.2-201ENST00000516520 PCNTO95613 3336 aa-0.03□□□□□ -2.41
SCARNA16.2-201ENST00000516520 DMDP11532 3685 aa-0.03□□□□□ -2.41
SCARNA16.2-201ENST00000516520 MUC17Q685J3 4493 aa-0.04□□□□□ -2.42
SCARNA16.2-201ENST00000516520 DCHS1Q96JQ0 3298 aa-0.04□□□□□ -2.42
SCARNA16.2-201ENST00000516520 MT1GP13640 62 aa-0.04□□□□□ -2.42
SCARNA16.2-201ENST00000516520 CEP350Q5VT06 3117 aa-0.04□□□□□ -2.42
SCARNA16.2-201ENST00000516520 BIRC6Q9NR09 4857 aa-0.04□□□□□ -2.42
SCARNA16.2-201ENST00000516520 DNAH17Q9UFH2 4485 aa-0.04□□□□□ -2.42
SCARNA16.2-201ENST00000516520 TRRAPQ9Y4A5 3859 aa-0.04□□□□□ -2.42
SCARNA16.2-201ENST00000516520 MYO15AQ9UKN7 3530 aa-0.04□□□□□ -2.42
SCARNA16.2-201ENST00000516520 LOC400499M0QZD8 3231 aa-0.04□□□□□ -2.42
SCARNA16.2-201ENST00000516520 PLECQ15149 4684 aaKnown RBP-0.05□□□□□ -2.42
SCARNA16.2-201ENST00000516520 KRTAP19-6Q3LI70 58 aa-0.06□□□□□ -2.42
SCARNA16.2-201ENST00000516520 COX14Q96I36 57 aa-0.06□□□□□ -2.42
SCARNA16.2-201ENST00000516520 EP400Q96L91 3159 aa-0.06□□□□□ -2.42
SCARNA16.2-201ENST00000516520 DYNC1H1Q14204 4646 aaKnown RBP-0.06□□□□□ -2.42
SCARNA16.2-201ENST00000516520 STARD9Q9P2P6 4700 aa-0.06□□□□□ -2.42
SCARNA16.2-201ENST00000516520 VPS13CQ709C8 3753 aa-0.06□□□□□ -2.42
SCARNA16.2-201ENST00000516520 DNHD1Q96M86 4753 aa-0.07□□□□□ -2.42
SCARNA16.2-201ENST00000516520 MT1BP07438 61 aa-0.07□□□□□ -2.42
SCARNA16.2-201ENST00000516520 DEFB108BQ8NET1 73 aa-0.07□□□□□ -2.42
SCARNA16.2-201ENST00000516520 SPEGQ15772 3267 aa-0.07□□□□□ -2.42
SCARNA16.2-201ENST00000516520 CFAP47Q6ZTR5 3102 aa-0.08□□□□□ -2.42
SCARNA16.2-201ENST00000516520 STATHP02808 62 aa-0.08□□□□□ -2.42
SCARNA16.2-201ENST00000516520 MT1FP04733 61 aa-0.08□□□□□ -2.42
SCARNA16.2-201ENST00000516520 UNC80Q8N2C7 3258 aa-0.09□□□□□ -2.42
SCARNA16.2-201ENST00000516520 WDFY3Q8IZQ1 3526 aa-0.09□□□□□ -2.42
SCARNA16.2-201ENST00000516520 HTN3P15516 51 aa-0.09□□□□□ -2.42
SCARNA16.2-201ENST00000516520 USP34Q70CQ2 3546 aa-0.09□□□□□ -2.42
SCARNA16.2-201ENST00000516520 ASPMQ8IZT6 3477 aa-0.09□□□□□ -2.42
SCARNA16.2-201ENST00000516520 DNAH14Q0VDD8 3507 aa-0.1□□□□□ -2.43
SCARNA16.2-201ENST00000516520 DNAH5Q8TE73 4624 aa-0.1□□□□□ -2.43
SCARNA16.2-201ENST00000516520 KRTAP19-2Q3LHN2 52 aa-0.1□□□□□ -2.43
SCARNA16.2-201ENST00000516520 VCANP13611 3396 aa-0.1□□□□□ -2.43
SCARNA16.2-201ENST00000516520 VPS13AQ96RL7 3174 aa-0.1□□□□□ -2.43
SCARNA16.2-201ENST00000516520 UTRNP46939 3433 aa-0.12□□□□□ -2.43
SCARNA16.2-201ENST00000516520 BRCA2P51587 3418 aa-0.12□□□□□ -2.43
SCARNA16.2-201ENST00000516520 GOLGB1Q14789 3259 aaKnown RBP-0.14□□□□□ -2.43
SCARNA16.2-201ENST00000516520 CDH23Q9H251 3354 aa-0.15□□□□□ -2.43
SCARNA16.2-201ENST00000516520 CENPFP49454 3210 aa-0.15□□□□□ -2.43
Retrieved 77 of 20,778 RNA–protein pairs in 9.2 ms