RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 KMT2DO14686 5537 aa4.69□□□□□ -1.66
PDLIM5-220ENST00000514830 TNP1P09430 55 aa4.69□□□□□ -1.66
PDLIM5-220ENST00000514830 BRK1Q8WUW1 75 aa4.69□□□□□ -1.66
PDLIM5-220ENST00000514830 MDN1Q9NU22 5596 aa4.68□□□□□ -1.66
PDLIM5-220ENST00000514830 KRTAP25-1Q3LHN0 102 aa4.65□□□□□ -1.67
PDLIM5-220ENST00000514830 SPRR2EP22531 72 aa4.63□□□□□ -1.67
PDLIM5-220ENST00000514830 SPRR2BP35325 72 aa4.63□□□□□ -1.67
PDLIM5-220ENST00000514830 SPRR2AP35326 72 aa4.63□□□□□ -1.67
PDLIM5-220ENST00000514830 SPRR2FQ96RM1 72 aa4.62□□□□□ -1.67
PDLIM5-220ENST00000514830 ROMO1P60602 79 aa4.61□□□□□ -1.67
PDLIM5-220ENST00000514830 KRTAP8-1Q8IUC2 63 aa4.61□□□□□ -1.67
PDLIM5-220ENST00000514830 KRTAP2-2Q9BYT5 123 aa4.61□□□□□ -1.67
PDLIM5-220ENST00000514830 KRTAP2-1Q9BYU5 128 aa4.61□□□□□ -1.67
PDLIM5-220ENST00000514830 KRTAP23-1A1A580 65 aa4.55□□□□□ -1.68
PDLIM5-220ENST00000514830 LCE3AQ5TA76 89 aa4.52□□□□□ -1.69
PDLIM5-220ENST00000514830 SPRR2DP22532 72 aa4.5□□□□□ -1.69
PDLIM5-220ENST00000514830 PRO0628Q9UI54 55 aa4.5□□□□□ -1.69
PDLIM5-220ENST00000514830 KRTAP19-7Q3SYF9 63 aa4.49□□□□□ -1.69
PDLIM5-220ENST00000514830 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
PDLIM5-220ENST00000514830 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
PDLIM5-220ENST00000514830 KRTAP19-5Q3LI72 72 aa4.44□□□□□ -1.7
PDLIM5-220ENST00000514830 PP632Q6XCG6 107 aa4.44□□□□□ -1.7
PDLIM5-220ENST00000514830 MT1EP04732 61 aa4.42□□□□□ -1.7
PDLIM5-220ENST00000514830 KRTAP12-3P60328 96 aa4.37□□□□□ -1.71
PDLIM5-220ENST00000514830 GPR98Q8WXG9 6306 aa4.33□□□□□ -1.72
PDLIM5-220ENST00000514830 KRTAP19-3Q7Z4W3 81 aa4.31□□□□□ -1.72
PDLIM5-220ENST00000514830 MT1LQ93083 61 aa4.29□□□□□ -1.72
PDLIM5-220ENST00000514830 MT1GP13640 62 aa4.27□□□□□ -1.73
PDLIM5-220ENST00000514830 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
PDLIM5-220ENST00000514830 KTN1-AS1Q86SY8 53 aa4.2□□□□□ -1.74
PDLIM5-220ENST00000514830 MT1MQ8N339 61 aa4.18□□□□□ -1.74
PDLIM5-220ENST00000514830 PRAC1Q96KF2 57 aa4.15□□□□□ -1.75
PDLIM5-220ENST00000514830 DSTQ03001 7570 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-220ENST00000514830 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
PDLIM5-220ENST00000514830 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
PDLIM5-220ENST00000514830 MT4P47944 62 aa3.92□□□□□ -1.78
PDLIM5-220ENST00000514830 HMCN1Q96RW7 5635 aa3.89□□□□□ -1.79
PDLIM5-220ENST00000514830 SVIPQ8NHG7 77 aa3.89□□□□□ -1.79
PDLIM5-220ENST00000514830 AHNAK2Q8IVF2 5795 aa3.87□□□□□ -1.79
PDLIM5-220ENST00000514830 KRTAP5-10Q6L8G5 202 aa3.84□□□□□ -1.79
PDLIM5-220ENST00000514830 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
PDLIM5-220ENST00000514830 SPRR5A0A1B0GTR4 108 aa3.82□□□□□ -1.8
PDLIM5-220ENST00000514830 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
PDLIM5-220ENST00000514830 KRTAP5-4Q6L8H1 288 aa3.81□□□□□ -1.8
PDLIM5-220ENST00000514830 KRTAP5-7Q6L8G8 165 aa3.77□□□□□ -1.81
PDLIM5-220ENST00000514830 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.74□□□□□ -1.81
PDLIM5-220ENST00000514830 MT1AP04731 61 aa3.67□□□□□ -1.82
PDLIM5-220ENST00000514830 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
PDLIM5-220ENST00000514830 KRTAP12-4P60329 112 aa3.6□□□□□ -1.83
PDLIM5-220ENST00000514830 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.83
PDLIM5-220ENST00000514830 KRTAP20-2Q3LI61 65 aa3.57□□□□□ -1.84
PDLIM5-220ENST00000514830 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
PDLIM5-220ENST00000514830 LUZP6Q538Z0 58 aa3.47□□□□□ -1.85
PDLIM5-220ENST00000514830 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
PDLIM5-220ENST00000514830 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
PDLIM5-220ENST00000514830 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
PDLIM5-220ENST00000514830 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.88
PDLIM5-220ENST00000514830 MT3P25713 68 aa3.33□□□□□ -1.88
PDLIM5-220ENST00000514830 MUC5ACP98088 5654 aa3.27□□□□□ -1.89
PDLIM5-220ENST00000514830 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
PDLIM5-220ENST00000514830 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
PDLIM5-220ENST00000514830 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
PDLIM5-220ENST00000514830 NDUFAF8A1L188 74 aa3.14□□□□□ -1.91
PDLIM5-220ENST00000514830 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
PDLIM5-220ENST00000514830 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
PDLIM5-220ENST00000514830 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
PDLIM5-220ENST00000514830 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
PDLIM5-220ENST00000514830 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
PDLIM5-220ENST00000514830 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
PDLIM5-220ENST00000514830 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
PDLIM5-220ENST00000514830 A0A0A0MQY5 61 aa2.72□□□□□ -1.97
PDLIM5-220ENST00000514830 INE1O15225 51 aa2.66□□□□□ -1.98
PDLIM5-220ENST00000514830 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
PDLIM5-220ENST00000514830 PRM1P04553 51 aa2.35□□□□□ -2.03
PDLIM5-220ENST00000514830 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
PDLIM5-220ENST00000514830 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
PDLIM5-220ENST00000514830 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
PDLIM5-220ENST00000514830 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 5.3 ms