RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 J3QR89 54 aa2.12□□□□□ -2.07
CLDND1-229ENST00000513988 APOC3P02656 99 aa2.12□□□□□ -2.07
CLDND1-229ENST00000513988 COX6CP09669 75 aa2.12□□□□□ -2.07
CLDND1-229ENST00000513988 SMIM6P0DI80 62 aa2.12□□□□□ -2.07
CLDND1-229ENST00000513988 C14orf144Q96I85 54 aa2.12□□□□□ -2.07
CLDND1-229ENST00000513988 TP53AIP1Q9HCN2 124 aa2.12□□□□□ -2.07
CLDND1-229ENST00000513988 HIGD1BQ9P298 99 aa2.12□□□□□ -2.07
CLDND1-229ENST00000513988 TRAV22A0A0B4J277 110 aa2.11□□□□□ -2.07
CLDND1-229ENST00000513988 JMJD7-PLA2G4BH0Y9G9 81 aa2.11□□□□□ -2.07
CLDND1-229ENST00000513988 BAALC-AS2P0C853 105 aa2.11□□□□□ -2.07
CLDND1-229ENST00000513988 LOC101927531A0A1B0GV80 90 aa2.09□□□□□ -2.07
CLDND1-229ENST00000513988 HIST3H2BBQ8N257 126 aa2.09□□□□□ -2.07
CLDND1-229ENST00000513988 SVBPQ8N300 66 aa2.09□□□□□ -2.07
CLDND1-229ENST00000513988 C14orf132Q9NPU4 83 aa2.09□□□□□ -2.07
CLDND1-229ENST00000513988 HIST1H2BLQ99880 126 aa2.08□□□□□ -2.08
CLDND1-229ENST00000513988 BRK1Q8WUW1 75 aa2.07□□□□□ -2.08
CLDND1-229ENST00000513988 HIST1H2BKO60814 126 aa2.06□□□□□ -2.08
CLDND1-229ENST00000513988 HIST1H2BJP06899 126 aa2.06□□□□□ -2.08
CLDND1-229ENST00000513988 H3BPC8 53 aa2.05□□□□□ -2.08
CLDND1-229ENST00000513988 H3BT86 120 aa2.04□□□□□ -2.08
CLDND1-229ENST00000513988 UQCRQO14949 82 aa2.04□□□□□ -2.08
CLDND1-229ENST00000513988 A0A1B0GU33 70 aa2.03□□□□□ -2.08
CLDND1-229ENST00000513988 K7ERJ3 54 aa2.03□□□□□ -2.08
CLDND1-229ENST00000513988 KRTAP12-3P60328 96 aa2.03□□□□□ -2.08
CLDND1-229ENST00000513988 TRAV7A0A075B6U4 112 aa2.02□□□□□ -2.09
CLDND1-229ENST00000513988 FXYD2P54710 66 aa2.02□□□□□ -2.09
CLDND1-229ENST00000513988 COX8AP10176 69 aa2□□□□□ -2.09
CLDND1-229ENST00000513988 KRTAP25-1Q3LHN0 102 aa1.99□□□□□ -2.09
CLDND1-229ENST00000513988 SPINT4Q6UDR6 99 aa1.99□□□□□ -2.09
CLDND1-229ENST00000513988 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
CLDND1-229ENST00000513988 M0R143 59 aa1.98□□□□□ -2.09
CLDND1-229ENST00000513988 CCDC179H3BU77 68 aa1.97□□□□□ -2.09
CLDND1-229ENST00000513988 TMEM258P61165 79 aa1.96□□□□□ -2.1
CLDND1-229ENST00000513988 ROMO1P60602 79 aa1.95□□□□□ -2.1
CLDND1-229ENST00000513988 HSD52Q0P140 79 aa1.95□□□□□ -2.1
CLDND1-229ENST00000513988 KRTAP13-4Q3LI77 160 aa1.95□□□□□ -2.1
CLDND1-229ENST00000513988 GTF2H5Q6ZYL4 71 aa1.95□□□□□ -2.1
CLDND1-229ENST00000513988 ATXN8Q156A1 80 aa1.94□□□□□ -2.1
CLDND1-229ENST00000513988 COL5A1-AS1Q5SY13 56 aa1.92□□□□□ -2.1
CLDND1-229ENST00000513988 SERP1Q9Y6X1 66 aa1.91□□□□□ -2.1
CLDND1-229ENST00000513988 TNP1P09430 55 aa1.9□□□□□ -2.11
CLDND1-229ENST00000513988 VAMP8Q9BV40 100 aa1.9□□□□□ -2.11
CLDND1-229ENST00000513988 SPCS1Q9Y6A9 102 aa1.88□□□□□ -2.11
CLDND1-229ENST00000513988 H0Y9P7 68 aa1.87□□□□□ -2.11
CLDND1-229ENST00000513988 ATOX1O00244 68 aa1.87□□□□□ -2.11
CLDND1-229ENST00000513988 MIR22HGQ0VDD5 57 aa1.83□□□□□ -2.12
CLDND1-229ENST00000513988 LINC00208Q96KT6 92 aa1.82□□□□□ -2.12
CLDND1-229ENST00000513988 DMAC1Q96GE9 116 aa1.81□□□□□ -2.12
CLDND1-229ENST00000513988 UBL5Q9BZL1 73 aa1.8□□□□□ -2.12
CLDND1-229ENST00000513988 Q1T7F1 81 aa1.79□□□□□ -2.12
CLDND1-229ENST00000513988 SPTSSBQ8NFR3 76 aa1.79□□□□□ -2.12
CLDND1-229ENST00000513988 COX7CP15954 63 aa1.78□□□□□ -2.12
CLDND1-229ENST00000513988 SPATA45Q537H7 98 aa1.78□□□□□ -2.12
CLDND1-229ENST00000513988 PYY3Q5JQD4 70 aa1.78□□□□□ -2.12
CLDND1-229ENST00000513988 ATP5EP56381 51 aaPredicted RBP1.77□□□□□ -2.13
CLDND1-229ENST00000513988 KRTAP12-1P59990 96 aa1.75□□□□□ -2.13
CLDND1-229ENST00000513988 F8W1H4 67 aa1.74□□□□□ -2.13
CLDND1-229ENST00000513988 CDC42SE1Q9NRR8 79 aa1.7□□□□□ -2.14
CLDND1-229ENST00000513988 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
CLDND1-229ENST00000513988 SPATA8Q6RVD6 105 aa1.66□□□□□ -2.14
CLDND1-229ENST00000513988 SERP2Q8N6R1 65 aa1.66□□□□□ -2.14
CLDND1-229ENST00000513988 COA5Q86WW8 74 aa1.65□□□□□ -2.15
CLDND1-229ENST00000513988 CHKB-CPT1BH3BT56 60 aa1.63□□□□□ -2.15
CLDND1-229ENST00000513988 INE1O15225 51 aa1.63□□□□□ -2.15
CLDND1-229ENST00000513988 ACYP2P14621 99 aa1.63□□□□□ -2.15
CLDND1-229ENST00000513988 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
CLDND1-229ENST00000513988 UQCR10Q9UDW1 63 aa1.62□□□□□ -2.15
CLDND1-229ENST00000513988 H7BZZ5 65 aa1.6□□□□□ -2.15
CLDND1-229ENST00000513988 SNURFQ9Y675 71 aa1.58□□□□□ -2.16
CLDND1-229ENST00000513988 ETDBQ3ZM63 59 aa1.57□□□□□ -2.16
CLDND1-229ENST00000513988 LINC00643Q86TS7 51 aa1.51□□□□□ -2.17
CLDND1-229ENST00000513988 LINC01558Q9Y6Z2 57 aa1.51□□□□□ -2.17
CLDND1-229ENST00000513988 UQCR11O14957 56 aa1.48□□□□□ -2.17
CLDND1-229ENST00000513988 PRR15LQ9BU68 103 aa1.44□□□□□ -2.18
CLDND1-229ENST00000513988 ATP5EP2Q5VTU8 51 aa1.37□□□□□ -2.19
CLDND1-229ENST00000513988 A0A1B0GU69 56 aa1.26□□□□□ -2.21
CLDND1-229ENST00000513988 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
CLDND1-229ENST00000513988 PRM1P04553 51 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 139.2 ms