RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 SPATA8Q6RVD6 105 aa5.48□□□□□ -1.53
SPCS3-204ENST00000513139 LINC01558Q9Y6Z2 57 aa5.48□□□□□ -1.53
SPCS3-204ENST00000513139 A0A0D9SG42 100 aa5.42□□□□□ -1.54
SPCS3-204ENST00000513139 PRR15LQ9BU68 103 aa5.42□□□□□ -1.54
SPCS3-204ENST00000513139 NDUFAF8A1L188 74 aa5.4□□□□□ -1.54
SPCS3-204ENST00000513139 A8MU10 97 aa5.35□□□□□ -1.55
SPCS3-204ENST00000513139 SMIM26A0A096LP01 95 aa5.34□□□□□ -1.55
SPCS3-204ENST00000513139 RPS28P62857 69 aaKnown RBP5.34□□□□□ -1.55
SPCS3-204ENST00000513139 Q1T7F1 81 aa5.33□□□□□ -1.56
SPCS3-204ENST00000513139 PSPHP1O15172 72 aa5.32□□□□□ -1.56
SPCS3-204ENST00000513139 SPINT4Q6UDR6 99 aa5.31□□□□□ -1.56
SPCS3-204ENST00000513139 V9GYY9 64 aa5.31□□□□□ -1.56
SPCS3-204ENST00000513139 KRTAP12-1P59990 96 aa5.3□□□□□ -1.56
SPCS3-204ENST00000513139 CAMK2N1Q7Z7J9 78 aa5.28□□□□□ -1.56
SPCS3-204ENST00000513139 UQCR11O14957 56 aa5.27□□□□□ -1.57
SPCS3-204ENST00000513139 HMCN1Q96RW7 5635 aa5.26□□□□□ -1.57
SPCS3-204ENST00000513139 KRTAP19-3Q7Z4W3 81 aa5.26□□□□□ -1.57
SPCS3-204ENST00000513139 KRTAP5-10Q6L8G5 202 aa5.25□□□□□ -1.57
SPCS3-204ENST00000513139 AHNAK2Q8IVF2 5795 aa5.24□□□□□ -1.57
SPCS3-204ENST00000513139 KRTAP19-7Q3SYF9 63 aa5.22□□□□□ -1.57
SPCS3-204ENST00000513139 MT4P47944 62 aa5.21□□□□□ -1.58
SPCS3-204ENST00000513139 MT1EP04732 61 aa5.2□□□□□ -1.58
SPCS3-204ENST00000513139 MIR22HGQ0VDD5 57 aa5.2□□□□□ -1.58
SPCS3-204ENST00000513139 A6NED7 52 aa5.12□□□□□ -1.59
SPCS3-204ENST00000513139 KRTAP5-7Q6L8G8 165 aa5.12□□□□□ -1.59
SPCS3-204ENST00000513139 MT1GP13640 62 aa5.11□□□□□ -1.59
SPCS3-204ENST00000513139 KRTAP5-4Q6L8H1 288 aa5.07□□□□□ -1.6
SPCS3-204ENST00000513139 PP632Q6XCG6 107 aa5.07□□□□□ -1.6
SPCS3-204ENST00000513139 C10orf95Q9H7T3 257 aa5.06□□□□□ -1.6
SPCS3-204ENST00000513139 K7ERS5 55 aa4.99□□□□□ -1.61
SPCS3-204ENST00000513139 MT1MQ8N339 61 aa4.98□□□□□ -1.61
SPCS3-204ENST00000513139 KRTAP19-5Q3LI72 72 aa4.94□□□□□ -1.62
SPCS3-204ENST00000513139 CDC42SE1Q9NRR8 79 aa4.94□□□□□ -1.62
SPCS3-204ENST00000513139 TNP1P09430 55 aa4.93□□□□□ -1.62
SPCS3-204ENST00000513139 LCE1FQ5T754 118 aa4.91□□□□□ -1.62
SPCS3-204ENST00000513139 MT1LQ93083 61 aa4.88□□□□□ -1.63
SPCS3-204ENST00000513139 SPRR5A0A1B0GTR4 108 aa4.87□□□□□ -1.63
SPCS3-204ENST00000513139 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
SPCS3-204ENST00000513139 KRTAP4-3Q9BYR4 195 aa4.85□□□□□ -1.63
SPCS3-204ENST00000513139 LCE3AQ5TA76 89 aa4.84□□□□□ -1.63
SPCS3-204ENST00000513139 KRTAP25-1Q3LHN0 102 aa4.8□□□□□ -1.64
SPCS3-204ENST00000513139 KRTAP20-2Q3LI61 65 aa4.8□□□□□ -1.64
SPCS3-204ENST00000513139 ROMO1P60602 79 aa4.76□□□□□ -1.65
SPCS3-204ENST00000513139 BRK1Q8WUW1 75 aa4.76□□□□□ -1.65
SPCS3-204ENST00000513139 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
SPCS3-204ENST00000513139 KRTAP12-4P60329 112 aa4.64□□□□□ -1.67
SPCS3-204ENST00000513139 KRTAP5-5Q701N2 237 aaPredicted RBP4.64□□□□□ -1.67
SPCS3-204ENST00000513139 LCE3CQ5T5A8 94 aa4.62□□□□□ -1.67
SPCS3-204ENST00000513139 KRTAP5-11Q6L8G4 156 aa4.57□□□□□ -1.68
SPCS3-204ENST00000513139 SYNE1Q8NF91 8797 aaKnown RBP4.53□□□□□ -1.68
SPCS3-204ENST00000513139 PMAIP1Q13794 54 aa4.49□□□□□ -1.69
SPCS3-204ENST00000513139 AHNAKQ09666 5890 aaKnown RBP4.47□□□□□ -1.69
SPCS3-204ENST00000513139 MUC5ACP98088 5654 aa4.44□□□□□ -1.7
SPCS3-204ENST00000513139 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
SPCS3-204ENST00000513139 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
SPCS3-204ENST00000513139 MUC5BQ9HC84 5762 aaPredicted RBP4.35□□□□□ -1.71
SPCS3-204ENST00000513139 KRTAP5-2Q701N4 177 aa4.35□□□□□ -1.71
SPCS3-204ENST00000513139 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
SPCS3-204ENST00000513139 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
SPCS3-204ENST00000513139 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
SPCS3-204ENST00000513139 LCE3EQ5T5B0 92 aa4.2□□□□□ -1.74
SPCS3-204ENST00000513139 MT1AP04731 61 aa4.15□□□□□ -1.75
SPCS3-204ENST00000513139 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
SPCS3-204ENST00000513139 KTN1-AS1Q86SY8 53 aa4.13□□□□□ -1.75
SPCS3-204ENST00000513139 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
SPCS3-204ENST00000513139 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
SPCS3-204ENST00000513139 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
SPCS3-204ENST00000513139 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
SPCS3-204ENST00000513139 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
SPCS3-204ENST00000513139 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
SPCS3-204ENST00000513139 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
SPCS3-204ENST00000513139 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
SPCS3-204ENST00000513139 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
SPCS3-204ENST00000513139 INE1O15225 51 aa2.71□□□□□ -1.98
SPCS3-204ENST00000513139 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.99
SPCS3-204ENST00000513139 PRM1P04553 51 aa2.47□□□□□ -2.01
SPCS3-204ENST00000513139 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
SPCS3-204ENST00000513139 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 60.7 ms