RNA–Protein interactions for RNA: ENST00000513121.1

MATR3-221, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-221ENST00000513121 MT1GP13640 62 aa6.88□□□□□ -1.31
MATR3-221ENST00000513121 C10orf95Q9H7T3 257 aa6.86□□□□□ -1.31
MATR3-221ENST00000513121 GPR98Q8WXG9 6306 aa6.81□□□□□ -1.32
MATR3-221ENST00000513121 LCE3AQ5TA76 89 aa6.81□□□□□ -1.32
MATR3-221ENST00000513121 MT1LQ93083 61 aa6.81□□□□□ -1.32
MATR3-221ENST00000513121 MT1MQ8N339 61 aa6.8□□□□□ -1.32
MATR3-221ENST00000513121 TNP1P09430 55 aa6.75□□□□□ -1.33
MATR3-221ENST00000513121 PP632Q6XCG6 107 aa6.75□□□□□ -1.33
MATR3-221ENST00000513121 LINC01558Q9Y6Z2 57 aa6.72□□□□□ -1.33
MATR3-221ENST00000513121 ATP5EP56381 51 aaPredicted RBP6.71□□□□□ -1.34
MATR3-221ENST00000513121 PRR15LQ9BU68 103 aa6.71□□□□□ -1.34
MATR3-221ENST00000513121 KRTAP4-3Q9BYR4 195 aa6.71□□□□□ -1.34
MATR3-221ENST00000513121 H3BS24 57 aa6.68□□□□□ -1.34
MATR3-221ENST00000513121 HMCN1Q96RW7 5635 aa6.61□□□□□ -1.35
MATR3-221ENST00000513121 MT4P47944 62 aa6.58□□□□□ -1.36
MATR3-221ENST00000513121 TMEM258P61165 79 aa6.54□□□□□ -1.36
MATR3-221ENST00000513121 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
MATR3-221ENST00000513121 UQCR11O14957 56 aa6.51□□□□□ -1.37
MATR3-221ENST00000513121 KRTAP5-4Q6L8H1 288 aa6.51□□□□□ -1.37
MATR3-221ENST00000513121 AHNAK2Q8IVF2 5795 aa6.42□□□□□ -1.38
MATR3-221ENST00000513121 MIR22HGQ0VDD5 57 aa6.4□□□□□ -1.38
MATR3-221ENST00000513121 KRTAP25-1Q3LHN0 102 aa6.32□□□□□ -1.4
MATR3-221ENST00000513121 PSPHP1O15172 72 aa6.27□□□□□ -1.41
MATR3-221ENST00000513121 KRTAP5-5Q701N2 237 aaPredicted RBP6.25□□□□□ -1.41
MATR3-221ENST00000513121 KRTAP5-10Q6L8G5 202 aa6.22□□□□□ -1.41
MATR3-221ENST00000513121 Q1T7F1 81 aa6.2□□□□□ -1.42
MATR3-221ENST00000513121 K7ERS5 55 aa6.19□□□□□ -1.42
MATR3-221ENST00000513121 V9GYY9 64 aa6.17□□□□□ -1.42
MATR3-221ENST00000513121 SYNE1Q8NF91 8797 aaKnown RBP6.15□□□□□ -1.42
MATR3-221ENST00000513121 KRTAP20-2Q3LI61 65 aa6.15□□□□□ -1.42
MATR3-221ENST00000513121 SPRR5A0A1B0GTR4 108 aa6.07□□□□□ -1.44
MATR3-221ENST00000513121 KRTAP23-1A1A580 65 aa6.07□□□□□ -1.44
MATR3-221ENST00000513121 KRTAP15-1Q3LI76 137 aa6.06□□□□□ -1.44
MATR3-221ENST00000513121 KRTAP12-4P60329 112 aa6.03□□□□□ -1.44
MATR3-221ENST00000513121 A6NED7 52 aa6□□□□□ -1.45
MATR3-221ENST00000513121 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
MATR3-221ENST00000513121 KRTAP5-7Q6L8G8 165 aa5.96□□□□□ -1.46
MATR3-221ENST00000513121 CDC42SE1Q9NRR8 79 aa5.91□□□□□ -1.46
MATR3-221ENST00000513121 ROMO1P60602 79 aa5.85□□□□□ -1.47
MATR3-221ENST00000513121 KRTAP6-1Q3LI64 71 aa5.79□□□□□ -1.48
MATR3-221ENST00000513121 MT1AP04731 61 aa5.77□□□□□ -1.49
MATR3-221ENST00000513121 RPS28P62857 69 aaKnown RBP5.77□□□□□ -1.49
MATR3-221ENST00000513121 KRTAP9-6A8MVA2 160 aa5.75□□□□□ -1.49
MATR3-221ENST00000513121 KRTAP5-2Q701N4 177 aa5.7□□□□□ -1.5
MATR3-221ENST00000513121 PCP4P48539 62 aa5.61□□□□□ -1.51
MATR3-221ENST00000513121 KRTAP6-2Q3LI66 62 aa5.53□□□□□ -1.52
MATR3-221ENST00000513121 KRTAP5-8O75690 187 aa5.45□□□□□ -1.54
MATR3-221ENST00000513121 OBSCNQ5VST9 7968 aa5.36□□□□□ -1.55
MATR3-221ENST00000513121 AHNAKQ09666 5890 aaKnown RBP5.33□□□□□ -1.56
MATR3-221ENST00000513121 MUC5BQ9HC84 5762 aaPredicted RBP5.31□□□□□ -1.56
MATR3-221ENST00000513121 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.28□□□□□ -1.56
MATR3-221ENST00000513121 MT3P25713 68 aa5.26□□□□□ -1.57
MATR3-221ENST00000513121 MUC5ACP98088 5654 aa5.26□□□□□ -1.57
MATR3-221ENST00000513121 KRTAP5-1Q6L8H4 278 aa5.14□□□□□ -1.59
MATR3-221ENST00000513121 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
MATR3-221ENST00000513121 KRTAP5-11Q6L8G4 156 aa5.08□□□□□ -1.6
MATR3-221ENST00000513121 BRK1Q8WUW1 75 aa5.04□□□□□ -1.6
MATR3-221ENST00000513121 LCE1EQ5T753 118 aa4.84□□□□□ -1.63
MATR3-221ENST00000513121 PMAIP1Q13794 54 aa4.71□□□□□ -1.66
MATR3-221ENST00000513121 PRAC1Q96KF2 57 aa4.68□□□□□ -1.66
MATR3-221ENST00000513121 LCE1BQ5T7P3 118 aa4.61□□□□□ -1.67
MATR3-221ENST00000513121 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
MATR3-221ENST00000513121 A0A0A0MQY5 61 aa4.48□□□□□ -1.69
MATR3-221ENST00000513121 KRTAP4-4Q9BYR3 166 aa4.39□□□□□ -1.71
MATR3-221ENST00000513121 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
MATR3-221ENST00000513121 PRO0628Q9UI54 55 aa4.23□□□□□ -1.73
MATR3-221ENST00000513121 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
MATR3-221ENST00000513121 LCE3EQ5T5B0 92 aa4.03□□□□□ -1.76
MATR3-221ENST00000513121 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
MATR3-221ENST00000513121 KRTAP21-2Q3LI59 83 aa3.82□□□□□ -1.8
MATR3-221ENST00000513121 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
MATR3-221ENST00000513121 PHGR1C9JFL3 82 aa3.6□□□□□ -1.83
MATR3-221ENST00000513121 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
MATR3-221ENST00000513121 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
MATR3-221ENST00000513121 PRM1P04553 51 aa3.02□□□□□ -1.93
MATR3-221ENST00000513121 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
MATR3-221ENST00000513121 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
MATR3-221ENST00000513121 INE1O15225 51 aa2.28□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 130 ms