RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081		A0A1B0GU69	56 aa		4.45	□□□□□ -1.7
CLDND1-223	ENST00000511081	ANAPC13	Q9BS18	74 aa		4.44	□□□□□ -1.7
CLDND1-223	ENST00000511081	KRTAP19-5	Q3LI72	72 aa		4.42	□□□□□ -1.7
CLDND1-223	ENST00000511081	MT1G	P13640	62 aa		4.41	□□□□□ -1.7
CLDND1-223	ENST00000511081		A8MU10	97 aa		4.4	□□□□□ -1.71
CLDND1-223	ENST00000511081	CCDC179	H3BU77	68 aa		4.38	□□□□□ -1.71
CLDND1-223	ENST00000511081	KRTAP5-1	Q6L8H4	278 aa		4.37	□□□□□ -1.71
CLDND1-223	ENST00000511081	C10orf95	Q9H7T3	257 aa		4.35	□□□□□ -1.71
CLDND1-223	ENST00000511081	ATP5E	P56381	51 aa	Predicted RBP	4.34	□□□□□ -1.71
CLDND1-223	ENST00000511081	PP632	Q6XCG6	107 aa		4.32	□□□□□ -1.72
CLDND1-223	ENST00000511081	MT1L	Q93083	61 aa		4.32	□□□□□ -1.72
CLDND1-223	ENST00000511081	LINC01558	Q9Y6Z2	57 aa		4.32	□□□□□ -1.72
CLDND1-223	ENST00000511081	TNP1	P09430	55 aa		4.31	□□□□□ -1.72
CLDND1-223	ENST00000511081	LCE3A	Q5TA76	89 aa		4.3	□□□□□ -1.72
CLDND1-223	ENST00000511081	MT1M	Q8N339	61 aa		4.3	□□□□□ -1.72
CLDND1-223	ENST00000511081	PRR15L	Q9BU68	103 aa		4.3	□□□□□ -1.72
CLDND1-223	ENST00000511081	GPR98	Q8WXG9	6306 aa		4.28	□□□□□ -1.72
CLDND1-223	ENST00000511081	HMCN1	Q96RW7	5635 aa		4.24	□□□□□ -1.73
CLDND1-223	ENST00000511081	KRTAP5-4	Q6L8H1	288 aa		4.24	□□□□□ -1.73
CLDND1-223	ENST00000511081	SVIP	Q8NHG7	77 aa		4.24	□□□□□ -1.73
CLDND1-223	ENST00000511081	KRTAP4-4	Q9BYR3	166 aa		4.22	□□□□□ -1.73
CLDND1-223	ENST00000511081	TMEM258	P61165	79 aa		4.2	□□□□□ -1.74
CLDND1-223	ENST00000511081	UQCR11	O14957	56 aa		4.19	□□□□□ -1.74
CLDND1-223	ENST00000511081	KRTAP4-3	Q9BYR4	195 aa		4.19	□□□□□ -1.74
CLDND1-223	ENST00000511081	KRTAP12-3	P60328	96 aa		4.15	□□□□□ -1.75
CLDND1-223	ENST00000511081	MT4	P47944	62 aa		4.11	□□□□□ -1.75
CLDND1-223	ENST00000511081	AHNAK2	Q8IVF2	5795 aa		4.1	□□□□□ -1.75
CLDND1-223	ENST00000511081	MIR22HG	Q0VDD5	57 aa		4.08	□□□□□ -1.76
CLDND1-223	ENST00000511081	KRTAP25-1	Q3LHN0	102 aa		4.07	□□□□□ -1.76
CLDND1-223	ENST00000511081		Q1T7F1	81 aa		4	□□□□□ -1.77
CLDND1-223	ENST00000511081		V9GYY9	64 aa		4	□□□□□ -1.77
CLDND1-223	ENST00000511081	KRTAP5-10	Q6L8G5	202 aa		3.99	□□□□□ -1.77
CLDND1-223	ENST00000511081	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.99	□□□□□ -1.77
CLDND1-223	ENST00000511081		K7ERS5	55 aa		3.98	□□□□□ -1.77
CLDND1-223	ENST00000511081	PSPHP1	O15172	72 aa		3.96	□□□□□ -1.78
CLDND1-223	ENST00000511081	KRTAP9-6	A8MVA2	160 aa		3.94	□□□□□ -1.78
CLDND1-223	ENST00000511081	SPRR5	A0A1B0GTR4	108 aa		3.9	□□□□□ -1.79
CLDND1-223	ENST00000511081	MT3	P25713	68 aa		3.9	□□□□□ -1.79
CLDND1-223	ENST00000511081	KRTAP20-2	Q3LI61	65 aa		3.9	□□□□□ -1.79
CLDND1-223	ENST00000511081	KRTAP5-7	Q6L8G8	165 aa		3.9	□□□□□ -1.79
CLDND1-223	ENST00000511081	SYNE1	Q8NF91	8797 aa	Known RBP	3.9	□□□□□ -1.79
CLDND1-223	ENST00000511081	KRTAP12-4	P60329	112 aa		3.85	□□□□□ -1.79
CLDND1-223	ENST00000511081	LCE3C	Q5T5A8	94 aa		3.83	□□□□□ -1.8
CLDND1-223	ENST00000511081		A6NED7	52 aa		3.81	□□□□□ -1.8
CLDND1-223	ENST00000511081	RPS28	P62857	69 aa	Known RBP	3.78	□□□□□ -1.8
CLDND1-223	ENST00000511081	CDC42SE1	Q9NRR8	79 aa		3.77	□□□□□ -1.81
CLDND1-223	ENST00000511081	ROMO1	P60602	79 aa		3.74	□□□□□ -1.81
CLDND1-223	ENST00000511081	OBSCN	Q5VST9	7968 aa		3.73	□□□□□ -1.81
CLDND1-223	ENST00000511081	MT1A	P04731	61 aa		3.68	□□□□□ -1.82
CLDND1-223	ENST00000511081	PCP4	P48539	62 aa		3.66	□□□□□ -1.82
CLDND1-223	ENST00000511081	KRTAP6-1	Q3LI64	71 aa		3.65	□□□□□ -1.83
CLDND1-223	ENST00000511081	KRTAP5-2	Q701N4	177 aa		3.65	□□□□□ -1.83
CLDND1-223	ENST00000511081	LCE1F	Q5T754	118 aa		3.54	□□□□□ -1.84
CLDND1-223	ENST00000511081	KRTAP6-2	Q3LI66	62 aa		3.49	□□□□□ -1.85
CLDND1-223	ENST00000511081	KRTAP5-8	O75690	187 aa		3.46	□□□□□ -1.86
CLDND1-223	ENST00000511081		A0A0A0MQY5	61 aa		3.45	□□□□□ -1.86
CLDND1-223	ENST00000511081	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.4	□□□□□ -1.87
CLDND1-223	ENST00000511081	AHNAK	Q09666	5890 aa	Known RBP	3.39	□□□□□ -1.87
CLDND1-223	ENST00000511081	MUC5AC	P98088	5654 aa		3.34	□□□□□ -1.87
CLDND1-223	ENST00000511081	BRK1	Q8WUW1	75 aa		3.19	□□□□□ -1.9
CLDND1-223	ENST00000511081	LCE3E	Q5T5B0	92 aa		3.07	□□□□□ -1.92
CLDND1-223	ENST00000511081	PMAIP1	Q13794	54 aa		3.03	□□□□□ -1.92
CLDND1-223	ENST00000511081	LCE1C	Q5T751	118 aa		2.93	□□□□□ -1.94
CLDND1-223	ENST00000511081	LCE1B	Q5T7P3	118 aa		2.93	□□□□□ -1.94
CLDND1-223	ENST00000511081	PRAC1	Q96KF2	57 aa		2.91	□□□□□ -1.94
CLDND1-223	ENST00000511081	LCE3D	Q9BYE3	92 aa		2.75	□□□□□ -1.97
CLDND1-223	ENST00000511081	PRO0628	Q9UI54	55 aa		2.75	□□□□□ -1.97
CLDND1-223	ENST00000511081	NDUFAF8	A1L188	74 aa		2.64	□□□□□ -1.99
CLDND1-223	ENST00000511081	KTN1-AS1	Q86SY8	53 aa		2.64	□□□□□ -1.99
CLDND1-223	ENST00000511081	LUZP6	Q538Z0	58 aa		2.46	□□□□□ -2.02
CLDND1-223	ENST00000511081	MUC19	Q7Z5P9	8384 aa		2.45	□□□□□ -2.02
CLDND1-223	ENST00000511081	KRTAP21-2	Q3LI59	83 aa		2.44	□□□□□ -2.02
CLDND1-223	ENST00000511081	PHGR1	C9JFL3	82 aa		2.28	□□□□□ -2.04
CLDND1-223	ENST00000511081	PRM1	P04553	51 aa		1.89	□□□□□ -2.11
CLDND1-223	ENST00000511081	KRTAP21-1	Q3LI58	79 aa		1.78	□□□□□ -2.12
CLDND1-223	ENST00000511081	INE1	O15225	51 aa		1.53	□□□□□ -2.16
CLDND1-223	ENST00000511081	MUC16	Q8WXI7	14507 aa		1.48	□□□□□ -2.17

Retrieved 77 of 20,778 RNA–protein pairs in 102 ms