RNA–Protein interactions for RNA: ENST00000509662.5

ATP2C1-217, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 559 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-217ENST00000509662 KRTAP19-5Q3LI72 72 aa8.72□□□□□ -1.01
ATP2C1-217ENST00000509662 LCE3AQ5TA76 89 aa8.71□□□□□ -1.02
ATP2C1-217ENST00000509662 MT1GP13640 62 aa8.58□□□□□ -1.04
ATP2C1-217ENST00000509662 PP632Q6XCG6 107 aa8.54□□□□□ -1.04
ATP2C1-217ENST00000509662 KRTAP25-1Q3LHN0 102 aa8.53□□□□□ -1.04
ATP2C1-217ENST00000509662 DSTQ03001 7570 aaKnown RBP8.47□□□□□ -1.05
ATP2C1-217ENST00000509662 MT1LQ93083 61 aa8.45□□□□□ -1.06
ATP2C1-217ENST00000509662 CDC42SE1Q9NRR8 79 aa8.43□□□□□ -1.06
ATP2C1-217ENST00000509662 MT1MQ8N339 61 aa8.38□□□□□ -1.07
ATP2C1-217ENST00000509662 KRTAP12-3P60328 96 aa8.37□□□□□ -1.07
ATP2C1-217ENST00000509662 H3BS24 57 aa8.33□□□□□ -1.08
ATP2C1-217ENST00000509662 KRTAP4-9Q9BYQ8 210 aa8.29□□□□□ -1.08
ATP2C1-217ENST00000509662 KRTAP23-1A1A580 65 aa8.24□□□□□ -1.09
ATP2C1-217ENST00000509662 ROMO1P60602 79 aa8.24□□□□□ -1.09
ATP2C1-217ENST00000509662 LCE4AQ5TA78 99 aa8.16□□□□□ -1.1
ATP2C1-217ENST00000509662 KRTAP4-3Q9BYR4 195 aa8.15□□□□□ -1.1
ATP2C1-217ENST00000509662 LCE1DQ5T752 114 aa8.1□□□□□ -1.11
ATP2C1-217ENST00000509662 KRTAP4-7Q9BYR0 210 aa8.05□□□□□ -1.12
ATP2C1-217ENST00000509662 MT4P47944 62 aa8.03□□□□□ -1.12
ATP2C1-217ENST00000509662 KRTAP5-4Q6L8H1 288 aa7.96□□□□□ -1.14
ATP2C1-217ENST00000509662 KRTAP15-1Q3LI76 137 aa7.94□□□□□ -1.14
ATP2C1-217ENST00000509662 KRTAP19-4Q3LI73 84 aa7.89□□□□□ -1.15
ATP2C1-217ENST00000509662 BRK1Q8WUW1 75 aa7.88□□□□□ -1.15
ATP2C1-217ENST00000509662 GPR98Q8WXG9 6306 aa7.88□□□□□ -1.15
ATP2C1-217ENST00000509662 HMCN1Q96RW7 5635 aa7.86□□□□□ -1.15
ATP2C1-217ENST00000509662 KRTAP4-6Q9BYQ5 205 aa7.79□□□□□ -1.16
ATP2C1-217ENST00000509662 LCE3CQ5T5A8 94 aa7.73□□□□□ -1.17
ATP2C1-217ENST00000509662 KRTAP5-5Q701N2 237 aaPredicted RBP7.66□□□□□ -1.18
ATP2C1-217ENST00000509662 SVIPQ8NHG7 77 aa7.66□□□□□ -1.18
ATP2C1-217ENST00000509662 LOC100996750A0A140TA64 210 aa7.6□□□□□ -1.19
ATP2C1-217ENST00000509662 AHNAK2Q8IVF2 5795 aa7.55□□□□□ -1.2
ATP2C1-217ENST00000509662 KRTAP12-4P60329 112 aa7.55□□□□□ -1.2
ATP2C1-217ENST00000509662 SPRR5A0A1B0GTR4 108 aa7.53□□□□□ -1.2
ATP2C1-217ENST00000509662 KRTAP20-2Q3LI61 65 aa7.52□□□□□ -1.21
ATP2C1-217ENST00000509662 KRTAP5-10Q6L8G5 202 aa7.5□□□□□ -1.21
ATP2C1-217ENST00000509662 PMAIP1Q13794 54 aa7.41□□□□□ -1.22
ATP2C1-217ENST00000509662 KRTAP5-3Q6L8H2 238 aa7.35□□□□□ -1.23
ATP2C1-217ENST00000509662 KRTAP9-6A8MVA2 160 aa7.34□□□□□ -1.23
ATP2C1-217ENST00000509662 SYNE1Q8NF91 8797 aaKnown RBP7.28□□□□□ -1.24
ATP2C1-217ENST00000509662 KRTAP5-7Q6L8G8 165 aa7.22□□□□□ -1.25
ATP2C1-217ENST00000509662 MT1AP04731 61 aa7.19□□□□□ -1.26
ATP2C1-217ENST00000509662 PRO0628Q9UI54 55 aa7.17□□□□□ -1.26
ATP2C1-217ENST00000509662 KRTAP6-1Q3LI64 71 aa7.13□□□□□ -1.27
ATP2C1-217ENST00000509662 PRAC1Q96KF2 57 aa7.12□□□□□ -1.27
ATP2C1-217ENST00000509662 KRTAP4-12Q9BQ66 201 aa7.06□□□□□ -1.28
ATP2C1-217ENST00000509662 KRTAP5-2Q701N4 177 aa6.97□□□□□ -1.29
ATP2C1-217ENST00000509662 KRTAP9-4Q9BYQ2 154 aa6.95□□□□□ -1.3
ATP2C1-217ENST00000509662 KRTAP4-11Q9BYQ6 195 aa6.88□□□□□ -1.31
ATP2C1-217ENST00000509662 KRTAP6-2Q3LI66 62 aa6.8□□□□□ -1.32
ATP2C1-217ENST00000509662 KTN1-AS1Q86SY8 53 aa6.8□□□□□ -1.32
ATP2C1-217ENST00000509662 KRTAP9-9Q9BYP9 154 aa6.62□□□□□ -1.35
ATP2C1-217ENST00000509662 KRTAP5-8O75690 187 aa6.61□□□□□ -1.35
ATP2C1-217ENST00000509662 MT3P25713 68 aa6.6□□□□□ -1.35
ATP2C1-217ENST00000509662 OBSCNQ5VST9 7968 aa6.45□□□□□ -1.38
ATP2C1-217ENST00000509662 KRTAP5-1Q6L8H4 278 aa6.25□□□□□ -1.41
ATP2C1-217ENST00000509662 MUC5ACP98088 5654 aa6.22□□□□□ -1.41
ATP2C1-217ENST00000509662 MUC5BQ9HC84 5762 aaPredicted RBP6.19□□□□□ -1.42
ATP2C1-217ENST00000509662 AHNAKQ09666 5890 aaKnown RBP6.17□□□□□ -1.42
ATP2C1-217ENST00000509662 LCE1EQ5T753 118 aa6.05□□□□□ -1.44
ATP2C1-217ENST00000509662 A0A0A0MQY5 61 aa6.04□□□□□ -1.44
ATP2C1-217ENST00000509662 LUZP6Q538Z0 58 aa5.88□□□□□ -1.47
ATP2C1-217ENST00000509662 KRTAP4-2Q9BYR5 136 aa5.87□□□□□ -1.47
ATP2C1-217ENST00000509662 LCE1BQ5T7P3 118 aa5.68□□□□□ -1.5
ATP2C1-217ENST00000509662 LCE3DQ9BYE3 92 aa5.63□□□□□ -1.51
ATP2C1-217ENST00000509662 LCE1CQ5T751 118 aa5.61□□□□□ -1.51
ATP2C1-217ENST00000509662 LCE3EQ5T5B0 92 aa5.36□□□□□ -1.55
ATP2C1-217ENST00000509662 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.09□□□□□ -1.59
ATP2C1-217ENST00000509662 NDUFAF8A1L188 74 aa5.06□□□□□ -1.6
ATP2C1-217ENST00000509662 KRTAP5-11Q6L8G4 156 aa5.05□□□□□ -1.6
ATP2C1-217ENST00000509662 LCE1FQ5T754 118 aa4.95□□□□□ -1.62
ATP2C1-217ENST00000509662 KRTAP21-2Q3LI59 83 aa4.7□□□□□ -1.66
ATP2C1-217ENST00000509662 PHGR1C9JFL3 82 aa4.39□□□□□ -1.71
ATP2C1-217ENST00000509662 KRTAP4-4Q9BYR3 166 aa4.28□□□□□ -1.72
ATP2C1-217ENST00000509662 PRM1P04553 51 aa4.25□□□□□ -1.73
ATP2C1-217ENST00000509662 INE1O15225 51 aa4.11□□□□□ -1.75
ATP2C1-217ENST00000509662 MUC19Q7Z5P9 8384 aa3.99□□□□□ -1.77
ATP2C1-217ENST00000509662 KRTAP21-1Q3LI58 79 aa3.35□□□□□ -1.87
ATP2C1-217ENST00000509662 MUC16Q8WXI7 14507 aa2.88□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 50.4 ms