RNA–Protein interactions for RNA: ENST00000509418.1

SMARCAD1-206, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2 BASIC

Gene SMARCAD1, Length 2,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-206ENST00000509418 LRBAP50851 2863 aa0.71□□□□□ -2.3
SMARCAD1-206ENST00000509418 DNAH5Q8TE73 4624 aa0.71□□□□□ -2.3
SMARCAD1-206ENST00000509418 MT1HL1P0DM35 61 aa0.71□□□□□ -2.3
SMARCAD1-206ENST00000509418 S4R3F8 94 aa0.71□□□□□ -2.3
SMARCAD1-206ENST00000509418 COL12A1Q99715 3063 aa0.71□□□□□ -2.3
SMARCAD1-206ENST00000509418 FCGBPQ9Y6R7 5405 aaPredicted RBP0.7□□□□□ -2.3
SMARCAD1-206ENST00000509418 TLN2Q9Y4G6 2542 aa0.7□□□□□ -2.3
SMARCAD1-206ENST00000509418 NBEAL1Q6ZS30 2694 aa0.7□□□□□ -2.3
SMARCAD1-206ENST00000509418 NF1P21359 2839 aa0.7□□□□□ -2.3
SMARCAD1-206ENST00000509418 MAP1AP78559 2803 aaPredicted RBP0.7□□□□□ -2.3
SMARCAD1-206ENST00000509418 DSTQ03001 7570 aaKnown RBP0.69□□□□□ -2.3
SMARCAD1-206ENST00000509418 RELNP78509 3460 aa0.69□□□□□ -2.3
SMARCAD1-206ENST00000509418 LAMA5O15230 3695 aa0.69□□□□□ -2.3
SMARCAD1-206ENST00000509418 ASPMQ8IZT6 3477 aa0.69□□□□□ -2.3
SMARCAD1-206ENST00000509418 MMP24-AS1A0A0U1RRL7 71 aa0.69□□□□□ -2.3
SMARCAD1-206ENST00000509418 CUBNO60494 3623 aa0.68□□□□□ -2.3
SMARCAD1-206ENST00000509418 MTORP42345 2549 aa0.68□□□□□ -2.3
SMARCAD1-206ENST00000509418 CENPEQ02224 2701 aa0.68□□□□□ -2.3
SMARCAD1-206ENST00000509418 WNK1Q9H4A3 2382 aa0.68□□□□□ -2.3
SMARCAD1-206ENST00000509418 CRYBG3Q68DQ2 2970 aa0.67□□□□□ -2.3
SMARCAD1-206ENST00000509418 TENM3Q9P273 2699 aa0.67□□□□□ -2.3
SMARCAD1-206ENST00000509418 KRTAP19-3Q7Z4W3 81 aa0.67□□□□□ -2.3
SMARCAD1-206ENST00000509418 CSMD2Q7Z408 3487 aa0.67□□□□□ -2.3
SMARCAD1-206ENST00000509418 A0A0C4DFX4 3053 aa0.67□□□□□ -2.3
SMARCAD1-206ENST00000509418 KRTAP19-2Q3LHN2 52 aa0.66□□□□□ -2.3
SMARCAD1-206ENST00000509418 TACC2O95359 2948 aa0.66□□□□□ -2.3
SMARCAD1-206ENST00000509418 SRRM2Q9UQ35 2752 aaKnown RBP0.66□□□□□ -2.3
SMARCAD1-206ENST00000509418 COL7A1Q02388 2944 aa0.65□□□□□ -2.31
SMARCAD1-206ENST00000509418 CSMD1Q96PZ7 3565 aa0.64□□□□□ -2.31
SMARCAD1-206ENST00000509418 SYNE1Q8NF91 8797 aaKnown RBP0.64□□□□□ -2.31
SMARCAD1-206ENST00000509418 MGAM2Q2M2H8 2515 aa0.64□□□□□ -2.31
SMARCAD1-206ENST00000509418 STAB2Q8WWQ8 2551 aa0.64□□□□□ -2.31
SMARCAD1-206ENST00000509418 PKD1L1Q8TDX9 2849 aa0.63□□□□□ -2.31
SMARCAD1-206ENST00000509418 LRP1Q07954 4544 aaKnown RBP0.63□□□□□ -2.31
SMARCAD1-206ENST00000509418 SMR3BP02814 79 aaPredicted RBP0.61□□□□□ -2.31
SMARCAD1-206ENST00000509418 M0QZ58 72 aa0.6□□□□□ -2.31
SMARCAD1-206ENST00000509418 KRTAP19-8Q3LI54 63 aa0.6□□□□□ -2.31
SMARCAD1-206ENST00000509418 TGP01266 2768 aa0.6□□□□□ -2.31
SMARCAD1-206ENST00000509418 DMBT1Q9UGM3 2413 aaPredicted RBP0.6□□□□□ -2.31
SMARCAD1-206ENST00000509418 M0R2T5 61 aa0.6□□□□□ -2.31
SMARCAD1-206ENST00000509418 SPRR2GQ9BYE4 73 aa0.6□□□□□ -2.31
SMARCAD1-206ENST00000509418 LRP2P98164 4655 aa0.6□□□□□ -2.31
SMARCAD1-206ENST00000509418 TENM2Q9NT68 2774 aa0.59□□□□□ -2.31
SMARCAD1-206ENST00000509418 PRM1P04553 51 aa0.59□□□□□ -2.31
SMARCAD1-206ENST00000509418 FLGP20930 4061 aaPredicted RBP0.59□□□□□ -2.32
SMARCAD1-206ENST00000509418 RNF213Q63HN8 5207 aa0.58□□□□□ -2.32
SMARCAD1-206ENST00000509418 MT1HP80294 61 aa0.58□□□□□ -2.32
SMARCAD1-206ENST00000509418 USH2AO75445 5202 aa0.57□□□□□ -2.32
SMARCAD1-206ENST00000509418 C9orf92A6NGG3 77 aa0.57□□□□□ -2.32
SMARCAD1-206ENST00000509418 MT2AP02795 61 aa0.55□□□□□ -2.32
SMARCAD1-206ENST00000509418 KRTAP19-6Q3LI70 58 aa0.55□□□□□ -2.32
SMARCAD1-206ENST00000509418 LPAP08519 4548 aa0.54□□□□□ -2.32
SMARCAD1-206ENST00000509418 MT1BP07438 61 aa0.54□□□□□ -2.32
SMARCAD1-206ENST00000509418 MT1FP04733 61 aa0.53□□□□□ -2.32
SMARCAD1-206ENST00000509418 KRTAP8-1Q8IUC2 63 aa0.52□□□□□ -2.33
SMARCAD1-206ENST00000509418 MT1XP80297 61 aa0.51□□□□□ -2.33
SMARCAD1-206ENST00000509418 TNP1P09430 55 aa0.5□□□□□ -2.33
SMARCAD1-206ENST00000509418 PHGR1C9JFL3 82 aa0.49□□□□□ -2.33
SMARCAD1-206ENST00000509418 MT1EP04732 61 aa0.48□□□□□ -2.33
SMARCAD1-206ENST00000509418 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
SMARCAD1-206ENST00000509418 KRTAP19-7Q3SYF9 63 aa0.47□□□□□ -2.33
SMARCAD1-206ENST00000509418 MT1GP13640 62 aa0.46□□□□□ -2.34
SMARCAD1-206ENST00000509418 MUC16Q8WXI7 14507 aa0.46□□□□□ -2.34
SMARCAD1-206ENST00000509418 MT1LQ93083 61 aa0.46□□□□□ -2.34
SMARCAD1-206ENST00000509418 MT1MQ8N339 61 aa0.44□□□□□ -2.34
SMARCAD1-206ENST00000509418 KRTAP19-5Q3LI72 72 aa0.44□□□□□ -2.34
SMARCAD1-206ENST00000509418 SPRR2DP22532 72 aa0.43□□□□□ -2.34
SMARCAD1-206ENST00000509418 MUC12Q9UKN1 5478 aa0.42□□□□□ -2.34
SMARCAD1-206ENST00000509418 MT1AP04731 61 aa0.41□□□□□ -2.34
SMARCAD1-206ENST00000509418 SPRR2EP22531 72 aa0.38□□□□□ -2.35
SMARCAD1-206ENST00000509418 SPRR2BP35325 72 aa0.38□□□□□ -2.35
SMARCAD1-206ENST00000509418 SPRR2AP35326 72 aa0.38□□□□□ -2.35
SMARCAD1-206ENST00000509418 SPRR2FQ96RM1 72 aa0.38□□□□□ -2.35
SMARCAD1-206ENST00000509418 KRTAP6-2Q3LI66 62 aa0.37□□□□□ -2.35
SMARCAD1-206ENST00000509418 KRTAP20-2Q3LI61 65 aa0.35□□□□□ -2.35
SMARCAD1-206ENST00000509418 KRTAP6-1Q3LI64 71 aa0.34□□□□□ -2.36
SMARCAD1-206ENST00000509418 MT4P47944 62 aa0.29□□□□□ -2.36
Retrieved 77 of 20,778 RNA–protein pairs in 61.3 ms