RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 KRTAP2-2Q9BYT5 123 aa7.28□□□□□ -1.24
HOXC6-204ENST00000509328 KRTAP2-1Q9BYU5 128 aa7.28□□□□□ -1.24
HOXC6-204ENST00000509328 LCE3BQ5TA77 95 aa7.27□□□□□ -1.25
HOXC6-204ENST00000509328 CDC42SE1Q9NRR8 79 aa7.26□□□□□ -1.25
HOXC6-204ENST00000509328 MT1GP13640 62 aa7.23□□□□□ -1.25
HOXC6-204ENST00000509328 MT1LQ93083 61 aa7.2□□□□□ -1.26
HOXC6-204ENST00000509328 PP632Q6XCG6 107 aa7.18□□□□□ -1.26
HOXC6-204ENST00000509328 KRTAP12-3P60328 96 aa7.17□□□□□ -1.26
HOXC6-204ENST00000509328 KRTAP23-1A1A580 65 aa7.1□□□□□ -1.27
HOXC6-204ENST00000509328 MT1MQ8N339 61 aa7.1□□□□□ -1.27
HOXC6-204ENST00000509328 ROMO1P60602 79 aa7.09□□□□□ -1.27
HOXC6-204ENST00000509328 DSTQ03001 7570 aaKnown RBP7.08□□□□□ -1.28
HOXC6-204ENST00000509328 KRTAP4-3Q9BYR4 195 aa6.91□□□□□ -1.3
HOXC6-204ENST00000509328 KRTAP4-7Q9BYR0 210 aa6.85□□□□□ -1.31
HOXC6-204ENST00000509328 KRTAP19-4Q3LI73 84 aa6.82□□□□□ -1.32
HOXC6-204ENST00000509328 KRTAP15-1Q3LI76 137 aa6.81□□□□□ -1.32
HOXC6-204ENST00000509328 BRK1Q8WUW1 75 aa6.8□□□□□ -1.32
HOXC6-204ENST00000509328 LCE4AQ5TA78 99 aa6.66□□□□□ -1.34
HOXC6-204ENST00000509328 KRTAP4-9Q9BYQ8 210 aa6.65□□□□□ -1.34
HOXC6-204ENST00000509328 LCE3CQ5T5A8 94 aa6.64□□□□□ -1.35
HOXC6-204ENST00000509328 KRTAP5-4Q6L8H1 288 aa6.59□□□□□ -1.35
HOXC6-204ENST00000509328 LCE1DQ5T752 114 aa6.56□□□□□ -1.36
HOXC6-204ENST00000509328 MT4P47944 62 aa6.52□□□□□ -1.37
HOXC6-204ENST00000509328 KRTAP5-5Q701N2 237 aaPredicted RBP6.48□□□□□ -1.37
HOXC6-204ENST00000509328 LOC100996750A0A140TA64 210 aa6.47□□□□□ -1.37
HOXC6-204ENST00000509328 HMCN1Q96RW7 5635 aa6.43□□□□□ -1.38
HOXC6-204ENST00000509328 PMAIP1Q13794 54 aa6.41□□□□□ -1.38
HOXC6-204ENST00000509328 KRTAP4-6Q9BYQ5 205 aa6.37□□□□□ -1.39
HOXC6-204ENST00000509328 KRTAP12-4P60329 112 aa6.25□□□□□ -1.41
HOXC6-204ENST00000509328 KRTAP9-6A8MVA2 160 aa6.23□□□□□ -1.41
HOXC6-204ENST00000509328 GPR98Q8WXG9 6306 aa6.23□□□□□ -1.41
HOXC6-204ENST00000509328 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
HOXC6-204ENST00000509328 PRO0628Q9UI54 55 aa6.2□□□□□ -1.42
HOXC6-204ENST00000509328 KRTAP20-2Q3LI61 65 aa6.19□□□□□ -1.42
HOXC6-204ENST00000509328 SYNE1Q8NF91 8797 aaKnown RBP6.16□□□□□ -1.42
HOXC6-204ENST00000509328 MT1AP04731 61 aa6.14□□□□□ -1.43
HOXC6-204ENST00000509328 AHNAK2Q8IVF2 5795 aa6.12□□□□□ -1.43
HOXC6-204ENST00000509328 PRAC1Q96KF2 57 aa6.09□□□□□ -1.43
HOXC6-204ENST00000509328 KRTAP6-1Q3LI64 71 aa6.07□□□□□ -1.44
HOXC6-204ENST00000509328 KRTAP5-3Q6L8H2 238 aa6□□□□□ -1.45
HOXC6-204ENST00000509328 KRTAP5-10Q6L8G5 202 aa5.92□□□□□ -1.46
HOXC6-204ENST00000509328 KRTAP9-4Q9BYQ2 154 aa5.91□□□□□ -1.46
HOXC6-204ENST00000509328 KTN1-AS1Q86SY8 53 aa5.86□□□□□ -1.47
HOXC6-204ENST00000509328 KRTAP5-2Q701N4 177 aa5.83□□□□□ -1.48
HOXC6-204ENST00000509328 KRTAP6-2Q3LI66 62 aa5.75□□□□□ -1.49
HOXC6-204ENST00000509328 KRTAP5-7Q6L8G8 165 aa5.66□□□□□ -1.5
HOXC6-204ENST00000509328 MT3P25713 68 aa5.61□□□□□ -1.51
HOXC6-204ENST00000509328 SVIPQ8NHG7 77 aa5.58□□□□□ -1.52
HOXC6-204ENST00000509328 KRTAP4-11Q9BYQ6 195 aa5.58□□□□□ -1.52
HOXC6-204ENST00000509328 OBSCNQ5VST9 7968 aa5.38□□□□□ -1.55
HOXC6-204ENST00000509328 KRTAP5-8O75690 187 aa5.38□□□□□ -1.55
HOXC6-204ENST00000509328 KRTAP5-1Q6L8H4 278 aa5.16□□□□□ -1.58
HOXC6-204ENST00000509328 LUZP6Q538Z0 58 aa5.13□□□□□ -1.59
HOXC6-204ENST00000509328 LCE1EQ5T753 118 aa5.08□□□□□ -1.6
HOXC6-204ENST00000509328 KRTAP9-9Q9BYP9 154 aa5.05□□□□□ -1.6
HOXC6-204ENST00000509328 MUC5ACP98088 5654 aa5.02□□□□□ -1.61
HOXC6-204ENST00000509328 MUC5BQ9HC84 5762 aaPredicted RBP4.96□□□□□ -1.62
HOXC6-204ENST00000509328 AHNAKQ09666 5890 aaKnown RBP4.94□□□□□ -1.62
HOXC6-204ENST00000509328 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
HOXC6-204ENST00000509328 KRTAP4-2Q9BYR5 136 aa4.75□□□□□ -1.65
HOXC6-204ENST00000509328 LCE1BQ5T7P3 118 aa4.74□□□□□ -1.65
HOXC6-204ENST00000509328 LCE1CQ5T751 118 aa4.71□□□□□ -1.66
HOXC6-204ENST00000509328 LCE3EQ5T5B0 92 aa4.62□□□□□ -1.67
HOXC6-204ENST00000509328 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
HOXC6-204ENST00000509328 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
HOXC6-204ENST00000509328 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
HOXC6-204ENST00000509328 KRTAP4-12Q9BQ66 201 aa4.17□□□□□ -1.74
HOXC6-204ENST00000509328 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
HOXC6-204ENST00000509328 KRTAP21-2Q3LI59 83 aa4□□□□□ -1.77
HOXC6-204ENST00000509328 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
HOXC6-204ENST00000509328 PRM1P04553 51 aa3.63□□□□□ -1.83
HOXC6-204ENST00000509328 A0A0A0MQY5 61 aa3.61□□□□□ -1.83
HOXC6-204ENST00000509328 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
HOXC6-204ENST00000509328 INE1O15225 51 aa3.59□□□□□ -1.83
HOXC6-204ENST00000509328 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
HOXC6-204ENST00000509328 H3BS24 57 aa2.71□□□□□ -1.98
HOXC6-204ENST00000509328 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
HOXC6-204ENST00000509328 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 91 ms