RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 DMAC1Q96GE9 116 aa1.55□□□□□ -2.16
CALCOCO2-213ENST00000509112 LUZP6Q538Z0 58 aa1.54□□□□□ -2.16
CALCOCO2-213ENST00000509112 ATP5EP2Q5VTU8 51 aa1.54□□□□□ -2.16
CALCOCO2-213ENST00000509112 LINC00208Q96KT6 92 aa1.54□□□□□ -2.16
CALCOCO2-213ENST00000509112 TRAV7A0A075B6U4 112 aa1.53□□□□□ -2.16
CALCOCO2-213ENST00000509112 H3BPC8 53 aa1.53□□□□□ -2.16
CALCOCO2-213ENST00000509112 KRTAP5-8O75690 187 aa1.53□□□□□ -2.16
CALCOCO2-213ENST00000509112 SMIM6P0DI80 62 aa1.53□□□□□ -2.16
CALCOCO2-213ENST00000509112 MP68P56378 58 aa1.52□□□□□ -2.17
CALCOCO2-213ENST00000509112 KRTAP19-5Q3LI72 72 aa1.51□□□□□ -2.17
CALCOCO2-213ENST00000509112 SPTSSBQ8NFR3 76 aa1.51□□□□□ -2.17
CALCOCO2-213ENST00000509112 MT1LQ93083 61 aa1.51□□□□□ -2.17
CALCOCO2-213ENST00000509112 FAM240AA0A1B0GVK7 77 aa1.5□□□□□ -2.17
CALCOCO2-213ENST00000509112 F8W1H4 67 aa1.5□□□□□ -2.17
CALCOCO2-213ENST00000509112 KRTAP20-2Q3LI61 65 aa1.5□□□□□ -2.17
CALCOCO2-213ENST00000509112 A0A0D9SG42 100 aa1.49□□□□□ -2.17
CALCOCO2-213ENST00000509112 HIST1H4AP62805 103 aaKnown RBP1.49□□□□□ -2.17
CALCOCO2-213ENST00000509112 ACYP2P14621 99 aa1.48□□□□□ -2.17
CALCOCO2-213ENST00000509112 ETDBQ3ZM63 59 aa1.48□□□□□ -2.17
CALCOCO2-213ENST00000509112 COL5A1-AS1Q5SY13 56 aa1.47□□□□□ -2.17
CALCOCO2-213ENST00000509112 GTF2H5Q6ZYL4 71 aa1.47□□□□□ -2.17
CALCOCO2-213ENST00000509112 PRO0628Q9UI54 55 aa1.47□□□□□ -2.17
CALCOCO2-213ENST00000509112 SYNE1Q8NF91 8797 aaKnown RBP1.46□□□□□ -2.18
CALCOCO2-213ENST00000509112 KRTAP13-4Q3LI77 160 aa1.46□□□□□ -2.18
CALCOCO2-213ENST00000509112 KRTAP12-4P60329 112 aa1.45□□□□□ -2.18
CALCOCO2-213ENST00000509112 LINC00643Q86TS7 51 aa1.45□□□□□ -2.18
CALCOCO2-213ENST00000509112 C10orf95Q9H7T3 257 aa1.42□□□□□ -2.18
CALCOCO2-213ENST00000509112 CHKB-CPT1BH3BT56 60 aa1.41□□□□□ -2.18
CALCOCO2-213ENST00000509112 MUC5BQ9HC84 5762 aaPredicted RBP1.4□□□□□ -2.19
CALCOCO2-213ENST00000509112 V9GYY9 64 aa1.39□□□□□ -2.19
CALCOCO2-213ENST00000509112 KRTAP12-1P59990 96 aa1.38□□□□□ -2.19
CALCOCO2-213ENST00000509112 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
CALCOCO2-213ENST00000509112 MUC5ACP98088 5654 aa1.37□□□□□ -2.19
CALCOCO2-213ENST00000509112 K7ERS5 55 aa1.37□□□□□ -2.19
CALCOCO2-213ENST00000509112 TNP1P09430 55 aa1.37□□□□□ -2.19
CALCOCO2-213ENST00000509112 LOC105371267A0A1B0GV96 52 aa1.36□□□□□ -2.19
CALCOCO2-213ENST00000509112 SCGB1A1P11684 91 aa1.36□□□□□ -2.19
CALCOCO2-213ENST00000509112 KRTAP12-3P60328 96 aa1.36□□□□□ -2.19
CALCOCO2-213ENST00000509112 A0A1B0GU33 70 aa1.35□□□□□ -2.19
CALCOCO2-213ENST00000509112 SMIM20Q8N5G0 67 aa1.35□□□□□ -2.19
CALCOCO2-213ENST00000509112 KRTAP25-1Q3LHN0 102 aa1.34□□□□□ -2.19
CALCOCO2-213ENST00000509112 SERP1Q9Y6X1 66 aa1.34□□□□□ -2.19
CALCOCO2-213ENST00000509112 SPATA8Q6RVD6 105 aa1.33□□□□□ -2.2
CALCOCO2-213ENST00000509112 MUC19Q7Z5P9 8384 aa1.32□□□□□ -2.2
CALCOCO2-213ENST00000509112 MT1AP04731 61 aa1.3□□□□□ -2.2
CALCOCO2-213ENST00000509112 ANAPC13Q9BS18 74 aa1.3□□□□□ -2.2
CALCOCO2-213ENST00000509112 J3QR89 54 aa1.29□□□□□ -2.2
CALCOCO2-213ENST00000509112 COA5Q86WW8 74 aa1.28□□□□□ -2.2
CALCOCO2-213ENST00000509112 KRTAP6-1Q3LI64 71 aa1.27□□□□□ -2.21
CALCOCO2-213ENST00000509112 SNURFQ9Y675 71 aa1.27□□□□□ -2.21
CALCOCO2-213ENST00000509112 KRTAP6-2Q3LI66 62 aa1.24□□□□□ -2.21
CALCOCO2-213ENST00000509112 A0A1B0GU69 56 aa1.23□□□□□ -2.21
CALCOCO2-213ENST00000509112 A6NED7 52 aa1.23□□□□□ -2.21
CALCOCO2-213ENST00000509112 SERP2Q8N6R1 65 aa1.22□□□□□ -2.21
CALCOCO2-213ENST00000509112 A0A1B0GV90 55 aa1.18□□□□□ -2.22
CALCOCO2-213ENST00000509112 PRR15LQ9BU68 103 aa1.18□□□□□ -2.22
CALCOCO2-213ENST00000509112 H7BZZ5 65 aa1.15□□□□□ -2.23
CALCOCO2-213ENST00000509112 K7ERU9 68 aa1.15□□□□□ -2.23
CALCOCO2-213ENST00000509112 KRTAP21-2Q3LI59 83 aa1.15□□□□□ -2.23
CALCOCO2-213ENST00000509112 COX7CP15954 63 aa1.13□□□□□ -2.23
CALCOCO2-213ENST00000509112 UQCR11O14957 56 aa1.12□□□□□ -2.23
CALCOCO2-213ENST00000509112 LINC01558Q9Y6Z2 57 aa1.12□□□□□ -2.23
CALCOCO2-213ENST00000509112 ATP5EP56381 51 aaPredicted RBP1.06□□□□□ -2.24
CALCOCO2-213ENST00000509112 MIR22HGQ0VDD5 57 aa1.06□□□□□ -2.24
CALCOCO2-213ENST00000509112 RPS28P62857 69 aaKnown RBP1.05□□□□□ -2.24
CALCOCO2-213ENST00000509112 Q1T7F1 81 aa1□□□□□ -2.25
CALCOCO2-213ENST00000509112 CDC42SE1Q9NRR8 79 aa1□□□□□ -2.25
CALCOCO2-213ENST00000509112 ROMO1P60602 79 aa0.97□□□□□ -2.25
CALCOCO2-213ENST00000509112 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
CALCOCO2-213ENST00000509112 TMEM258P61165 79 aa0.94□□□□□ -2.26
CALCOCO2-213ENST00000509112 CCDC179H3BU77 68 aa0.93□□□□□ -2.26
CALCOCO2-213ENST00000509112 KTN1-AS1Q86SY8 53 aa0.9□□□□□ -2.27
CALCOCO2-213ENST00000509112 PMAIP1Q13794 54 aa0.77□□□□□ -2.29
CALCOCO2-213ENST00000509112 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
CALCOCO2-213ENST00000509112 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
CALCOCO2-213ENST00000509112 INE1O15225 51 aa0.64□□□□□ -2.31
CALCOCO2-213ENST00000509112 BRK1Q8WUW1 75 aa0.6□□□□□ -2.31
CALCOCO2-213ENST00000509112 PRM1P04553 51 aa0.46□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 60.3 ms