RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 C10orf95Q9H7T3 257 aa7.85□□□□□ -1.15
PACRGL-220ENST00000508952 CCDC179H3BU77 68 aa7.82□□□□□ -1.16
PACRGL-220ENST00000508952 KRTAP4-2Q9BYR5 136 aa7.81□□□□□ -1.16
PACRGL-220ENST00000508952 TNP1P09430 55 aa7.8□□□□□ -1.16
PACRGL-220ENST00000508952 PRR15LQ9BU68 103 aa7.75□□□□□ -1.17
PACRGL-220ENST00000508952 KRTAP4-3Q9BYR4 195 aa7.72□□□□□ -1.17
PACRGL-220ENST00000508952 ATP5EP56381 51 aaPredicted RBP7.71□□□□□ -1.18
PACRGL-220ENST00000508952 LCE4AQ5TA78 99 aa7.68□□□□□ -1.18
PACRGL-220ENST00000508952 HMCN1Q96RW7 5635 aa7.67□□□□□ -1.18
PACRGL-220ENST00000508952 MT4P47944 62 aa7.66□□□□□ -1.18
PACRGL-220ENST00000508952 LINC01558Q9Y6Z2 57 aa7.66□□□□□ -1.18
PACRGL-220ENST00000508952 SVIPQ8NHG7 77 aa7.6□□□□□ -1.19
PACRGL-220ENST00000508952 KRTAP4-11Q9BYQ6 195 aa7.57□□□□□ -1.2
PACRGL-220ENST00000508952 KRTAP5-4Q6L8H1 288 aa7.53□□□□□ -1.2
PACRGL-220ENST00000508952 KRTAP12-3P60328 96 aa7.52□□□□□ -1.21
PACRGL-220ENST00000508952 UQCR11O14957 56 aa7.49□□□□□ -1.21
PACRGL-220ENST00000508952 TMEM258P61165 79 aa7.47□□□□□ -1.21
PACRGL-220ENST00000508952 AHNAK2Q8IVF2 5795 aa7.45□□□□□ -1.22
PACRGL-220ENST00000508952 MIR22HGQ0VDD5 57 aa7.32□□□□□ -1.24
PACRGL-220ENST00000508952 KRTAP25-1Q3LHN0 102 aa7.3□□□□□ -1.24
PACRGL-220ENST00000508952 H3BS24 57 aa7.25□□□□□ -1.25
PACRGL-220ENST00000508952 KRTAP5-10Q6L8G5 202 aa7.24□□□□□ -1.25
PACRGL-220ENST00000508952 KRTAP5-5Q701N2 237 aaPredicted RBP7.2□□□□□ -1.26
PACRGL-220ENST00000508952 K7ERS5 55 aa7.19□□□□□ -1.26
PACRGL-220ENST00000508952 KRTAP5-3Q6L8H2 238 aa7.18□□□□□ -1.26
PACRGL-220ENST00000508952 PSPHP1O15172 72 aa7.15□□□□□ -1.26
PACRGL-220ENST00000508952 KRTAP20-2Q3LI61 65 aa7.13□□□□□ -1.27
PACRGL-220ENST00000508952 V9GYY9 64 aa7.07□□□□□ -1.28
PACRGL-220ENST00000508952 SPRR5A0A1B0GTR4 108 aa7.05□□□□□ -1.28
PACRGL-220ENST00000508952 Q1T7F1 81 aa7.04□□□□□ -1.28
PACRGL-220ENST00000508952 KRTAP19-4Q3LI73 84 aa7.03□□□□□ -1.28
PACRGL-220ENST00000508952 KRTAP12-4P60329 112 aa7.02□□□□□ -1.29
PACRGL-220ENST00000508952 SYNE1Q8NF91 8797 aaKnown RBP6.99□□□□□ -1.29
PACRGL-220ENST00000508952 KRTAP23-1A1A580 65 aa6.98□□□□□ -1.29
PACRGL-220ENST00000508952 KRTAP15-1Q3LI76 137 aa6.98□□□□□ -1.29
PACRGL-220ENST00000508952 KRTAP5-7Q6L8G8 165 aa6.96□□□□□ -1.3
PACRGL-220ENST00000508952 LCE3CQ5T5A8 94 aa6.91□□□□□ -1.3
PACRGL-220ENST00000508952 A6NED7 52 aa6.88□□□□□ -1.31
PACRGL-220ENST00000508952 CDC42SE1Q9NRR8 79 aa6.8□□□□□ -1.32
PACRGL-220ENST00000508952 ROMO1P60602 79 aa6.7□□□□□ -1.34
PACRGL-220ENST00000508952 MT1AP04731 61 aa6.67□□□□□ -1.34
PACRGL-220ENST00000508952 KRTAP6-1Q3LI64 71 aa6.66□□□□□ -1.34
PACRGL-220ENST00000508952 RPS28P62857 69 aaKnown RBP6.62□□□□□ -1.35
PACRGL-220ENST00000508952 KRTAP5-2Q701N4 177 aa6.58□□□□□ -1.36
PACRGL-220ENST00000508952 KRTAP9-6A8MVA2 160 aa6.57□□□□□ -1.36
PACRGL-220ENST00000508952 PCP4P48539 62 aa6.42□□□□□ -1.38
PACRGL-220ENST00000508952 KRTAP6-2Q3LI66 62 aa6.39□□□□□ -1.39
PACRGL-220ENST00000508952 KRTAP5-8O75690 187 aa6.32□□□□□ -1.4
PACRGL-220ENST00000508952 OBSCNQ5VST9 7968 aa6.25□□□□□ -1.41
PACRGL-220ENST00000508952 AHNAKQ09666 5890 aaKnown RBP6.15□□□□□ -1.43
PACRGL-220ENST00000508952 MUC5BQ9HC84 5762 aaPredicted RBP6.14□□□□□ -1.43
PACRGL-220ENST00000508952 MUC5ACP98088 5654 aa6.11□□□□□ -1.43
PACRGL-220ENST00000508952 MT3P25713 68 aa6.09□□□□□ -1.43
PACRGL-220ENST00000508952 A0A0A0MQY5 61 aa5.99□□□□□ -1.45
PACRGL-220ENST00000508952 KRTAP5-1Q6L8H4 278 aa5.92□□□□□ -1.46
PACRGL-220ENST00000508952 BRK1Q8WUW1 75 aa5.73□□□□□ -1.49
PACRGL-220ENST00000508952 LCE1EQ5T753 118 aa5.6□□□□□ -1.51
PACRGL-220ENST00000508952 PMAIP1Q13794 54 aa5.35□□□□□ -1.55
PACRGL-220ENST00000508952 LCE1BQ5T7P3 118 aa5.34□□□□□ -1.55
PACRGL-220ENST00000508952 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.33□□□□□ -1.56
PACRGL-220ENST00000508952 PRAC1Q96KF2 57 aa5.27□□□□□ -1.57
PACRGL-220ENST00000508952 LCE1CQ5T751 118 aa5.2□□□□□ -1.58
PACRGL-220ENST00000508952 KRTAP5-11Q6L8G4 156 aa5.1□□□□□ -1.59
PACRGL-220ENST00000508952 PRO0628Q9UI54 55 aa5□□□□□ -1.61
PACRGL-220ENST00000508952 LCE3DQ9BYE3 92 aa4.95□□□□□ -1.62
PACRGL-220ENST00000508952 LCE3EQ5T5B0 92 aa4.64□□□□□ -1.67
PACRGL-220ENST00000508952 KTN1-AS1Q86SY8 53 aa4.62□□□□□ -1.67
PACRGL-220ENST00000508952 LCE1FQ5T754 118 aa4.6□□□□□ -1.67
PACRGL-220ENST00000508952 NDUFAF8A1L188 74 aa4.53□□□□□ -1.68
PACRGL-220ENST00000508952 KRTAP4-4Q9BYR3 166 aa4.44□□□□□ -1.7
PACRGL-220ENST00000508952 LUZP6Q538Z0 58 aa4.4□□□□□ -1.71
PACRGL-220ENST00000508952 KRTAP21-2Q3LI59 83 aa4.38□□□□□ -1.71
PACRGL-220ENST00000508952 PHGR1C9JFL3 82 aa4.23□□□□□ -1.73
PACRGL-220ENST00000508952 MUC19Q7Z5P9 8384 aa3.89□□□□□ -1.79
PACRGL-220ENST00000508952 PRM1P04553 51 aa3.44□□□□□ -1.86
PACRGL-220ENST00000508952 KRTAP21-1Q3LI58 79 aa3.19□□□□□ -1.9
PACRGL-220ENST00000508952 INE1O15225 51 aa3.05□□□□□ -1.92
PACRGL-220ENST00000508952 MUC16Q8WXI7 14507 aa2.74□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 99.6 ms