RNA–Protein interactions for RNA: ENST00000508579.5

CAST-222, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-222ENST00000508579 KRTAP2-4Q9BYR9 128 aa3.02□□□□□ -1.93
CAST-222ENST00000508579 KRTAP2-1Q9BYU5 128 aa3.02□□□□□ -1.93
CAST-222ENST00000508579 MT1HL1P0DM35 61 aa3.01□□□□□ -1.93
CAST-222ENST00000508579 RNF213Q63HN8 5207 aa2.94□□□□□ -1.94
CAST-222ENST00000508579 LCE3AQ5TA76 89 aa2.92□□□□□ -1.94
CAST-222ENST00000508579 FLGP20930 4061 aaPredicted RBP2.9□□□□□ -1.95
CAST-222ENST00000508579 FAT4Q6V0I7 4981 aa2.89□□□□□ -1.95
CAST-222ENST00000508579 CRCT1Q9UGL9 99 aa2.89□□□□□ -1.95
CAST-222ENST00000508579 KRTAP10-5P60370 271 aa2.87□□□□□ -1.95
CAST-222ENST00000508579 KRTAP19-2Q3LHN2 52 aa2.87□□□□□ -1.95
CAST-222ENST00000508579 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
CAST-222ENST00000508579 SPRR2GQ9BYE4 73 aa2.85□□□□□ -1.95
CAST-222ENST00000508579 LRP2P98164 4655 aa2.84□□□□□ -1.95
CAST-222ENST00000508579 KRTAP12-3P60328 96 aa2.83□□□□□ -1.96
CAST-222ENST00000508579 KRTAP4-3Q9BYR4 195 aa2.82□□□□□ -1.96
CAST-222ENST00000508579 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
CAST-222ENST00000508579 MUC17Q685J3 4493 aa2.79□□□□□ -1.96
CAST-222ENST00000508579 LCE3CQ5T5A8 94 aa2.78□□□□□ -1.96
CAST-222ENST00000508579 KRTAP4-1Q9BYQ7 146 aa2.77□□□□□ -1.97
CAST-222ENST00000508579 LPAP08519 4548 aa2.74□□□□□ -1.97
CAST-222ENST00000508579 KRTAP19-8Q3LI54 63 aa2.69□□□□□ -1.98
CAST-222ENST00000508579 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
CAST-222ENST00000508579 NEBP20929 6669 aa2.67□□□□□ -1.98
CAST-222ENST00000508579 FSIP2Q5CZC0 6907 aa2.67□□□□□ -1.98
CAST-222ENST00000508579 KRTAP20-1Q3LI63 56 aa2.64□□□□□ -1.99
CAST-222ENST00000508579 SSPOA2VEC9 5147 aa2.62□□□□□ -1.99
CAST-222ENST00000508579 MT1XP80297 61 aa2.58□□□□□ -2
CAST-222ENST00000508579 PRM1P04553 51 aa2.56□□□□□ -2
CAST-222ENST00000508579 SYNE2Q8WXH0 6885 aaKnown RBP2.56□□□□□ -2
CAST-222ENST00000508579 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
CAST-222ENST00000508579 HMCN1Q96RW7 5635 aa2.55□□□□□ -2
CAST-222ENST00000508579 KRTAP19-5Q3LI72 72 aa2.54□□□□□ -2
CAST-222ENST00000508579 MT2AP02795 61 aa2.53□□□□□ -2
CAST-222ENST00000508579 MT1BP07438 61 aa2.52□□□□□ -2.01
CAST-222ENST00000508579 MACF1Q9UPN3 7388 aaKnown RBP2.5□□□□□ -2.01
CAST-222ENST00000508579 MT1FP04733 61 aa2.5□□□□□ -2.01
CAST-222ENST00000508579 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
CAST-222ENST00000508579 MT1HP80294 61 aa2.48□□□□□ -2.01
CAST-222ENST00000508579 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
CAST-222ENST00000508579 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.02
CAST-222ENST00000508579 MT1AP04731 61 aa2.38□□□□□ -2.03
CAST-222ENST00000508579 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
CAST-222ENST00000508579 KRTAP5-5Q701N2 237 aaPredicted RBP2.37□□□□□ -2.03
CAST-222ENST00000508579 USH2AO75445 5202 aa2.37□□□□□ -2.03
CAST-222ENST00000508579 FCGBPQ9Y6R7 5405 aaPredicted RBP2.34□□□□□ -2.03
CAST-222ENST00000508579 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
CAST-222ENST00000508579 MT1EP04732 61 aa2.32□□□□□ -2.04
CAST-222ENST00000508579 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
CAST-222ENST00000508579 MT1LQ93083 61 aa2.29□□□□□ -2.04
CAST-222ENST00000508579 KRTAP19-7Q3SYF9 63 aa2.28□□□□□ -2.04
CAST-222ENST00000508579 MUC12Q9UKN1 5478 aa2.21□□□□□ -2.06
CAST-222ENST00000508579 SYNE1Q8NF91 8797 aaKnown RBP2.18□□□□□ -2.06
CAST-222ENST00000508579 KRTAP6-2Q3LI66 62 aa2.18□□□□□ -2.06
CAST-222ENST00000508579 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
CAST-222ENST00000508579 SPRR2BP35325 72 aa2.13□□□□□ -2.07
CAST-222ENST00000508579 MT1GP13640 62 aa2.12□□□□□ -2.07
CAST-222ENST00000508579 SPRR2AP35326 72 aa2.12□□□□□ -2.07
CAST-222ENST00000508579 SPRR2DP22532 72 aa2.11□□□□□ -2.07
CAST-222ENST00000508579 SPRR2FQ96RM1 72 aa2.11□□□□□ -2.07
CAST-222ENST00000508579 KMT2DO14686 5537 aa2.09□□□□□ -2.07
CAST-222ENST00000508579 MDN1Q9NU22 5596 aa2.08□□□□□ -2.08
CAST-222ENST00000508579 KRTAP19-6Q3LI70 58 aa2.07□□□□□ -2.08
CAST-222ENST00000508579 MT1MQ8N339 61 aa2.07□□□□□ -2.08
CAST-222ENST00000508579 KRTAP19-3Q7Z4W3 81 aa2.05□□□□□ -2.08
CAST-222ENST00000508579 DSTQ03001 7570 aaKnown RBP2.05□□□□□ -2.08
CAST-222ENST00000508579 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
CAST-222ENST00000508579 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
CAST-222ENST00000508579 SPRR2EP22531 72 aa1.98□□□□□ -2.09
CAST-222ENST00000508579 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
CAST-222ENST00000508579 KRTAP6-1Q3LI64 71 aa1.87□□□□□ -2.11
CAST-222ENST00000508579 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
CAST-222ENST00000508579 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
CAST-222ENST00000508579 MT4P47944 62 aa1.59□□□□□ -2.16
CAST-222ENST00000508579 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
CAST-222ENST00000508579 KRTAP20-2Q3LI61 65 aa1.42□□□□□ -2.18
CAST-222ENST00000508579 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
CAST-222ENST00000508579 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 85.4 ms