RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
TSPAN17-206ENST00000507471 A0A1B0GU33 70 aa4.64□□□□□ -1.67
TSPAN17-206ENST00000507471 COA5Q86WW8 74 aa4.63□□□□□ -1.67
TSPAN17-206ENST00000507471 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
TSPAN17-206ENST00000507471 ANAPC13Q9BS18 74 aa4.61□□□□□ -1.67
TSPAN17-206ENST00000507471 H7BZZ5 65 aa4.6□□□□□ -1.67
TSPAN17-206ENST00000507471 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.67
TSPAN17-206ENST00000507471 TNP1P09430 55 aa4.58□□□□□ -1.68
TSPAN17-206ENST00000507471 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
TSPAN17-206ENST00000507471 SMIM26A0A096LP01 95 aa4.5□□□□□ -1.69
TSPAN17-206ENST00000507471 A8MU10 97 aa4.5□□□□□ -1.69
TSPAN17-206ENST00000507471 KRTAP12-3P60328 96 aa4.5□□□□□ -1.69
TSPAN17-206ENST00000507471 CCDC179H3BU77 68 aa4.48□□□□□ -1.69
TSPAN17-206ENST00000507471 ATP5EP56381 51 aaPredicted RBP4.47□□□□□ -1.69
TSPAN17-206ENST00000507471 A0A1B0GU69 56 aa4.4□□□□□ -1.71
TSPAN17-206ENST00000507471 TMEM258P61165 79 aa4.38□□□□□ -1.71
TSPAN17-206ENST00000507471 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
TSPAN17-206ENST00000507471 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
TSPAN17-206ENST00000507471 PRR15LQ9BU68 103 aa4.34□□□□□ -1.71
TSPAN17-206ENST00000507471 LINC01558Q9Y6Z2 57 aa4.29□□□□□ -1.72
TSPAN17-206ENST00000507471 KRTAP5-2Q701N4 177 aa4.26□□□□□ -1.73
TSPAN17-206ENST00000507471 KRTAP5-8O75690 187 aa4.22□□□□□ -1.73
TSPAN17-206ENST00000507471 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
TSPAN17-206ENST00000507471 UQCR11O14957 56 aa4.18□□□□□ -1.74
TSPAN17-206ENST00000507471 V9GYY9 64 aa4.18□□□□□ -1.74
TSPAN17-206ENST00000507471 MUC5ACP98088 5654 aa4.17□□□□□ -1.74
TSPAN17-206ENST00000507471 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
TSPAN17-206ENST00000507471 MT1AP04731 61 aa4.15□□□□□ -1.75
TSPAN17-206ENST00000507471 KRTAP25-1Q3LHN0 102 aa4.14□□□□□ -1.75
TSPAN17-206ENST00000507471 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
TSPAN17-206ENST00000507471 Q1T7F1 81 aa4.11□□□□□ -1.75
TSPAN17-206ENST00000507471 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
TSPAN17-206ENST00000507471 AHNAKQ09666 5890 aaKnown RBP4.1□□□□□ -1.75
TSPAN17-206ENST00000507471 MUC5BQ9HC84 5762 aaPredicted RBP4.1□□□□□ -1.75
TSPAN17-206ENST00000507471 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.75
TSPAN17-206ENST00000507471 MIR22HGQ0VDD5 57 aa4.08□□□□□ -1.76
TSPAN17-206ENST00000507471 PCP4P48539 62 aa4.06□□□□□ -1.76
TSPAN17-206ENST00000507471 RPS28P62857 69 aaKnown RBP4.05□□□□□ -1.76
TSPAN17-206ENST00000507471 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
TSPAN17-206ENST00000507471 K7ERS5 55 aa4.04□□□□□ -1.76
TSPAN17-206ENST00000507471 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
TSPAN17-206ENST00000507471 KRTAP9-9Q9BYP9 154 aa4.04□□□□□ -1.76
TSPAN17-206ENST00000507471 PSPHP1O15172 72 aa4.03□□□□□ -1.76
TSPAN17-206ENST00000507471 KRTAP23-1A1A580 65 aa3.96□□□□□ -1.78
TSPAN17-206ENST00000507471 A6NED7 52 aa3.94□□□□□ -1.78
TSPAN17-206ENST00000507471 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
TSPAN17-206ENST00000507471 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
TSPAN17-206ENST00000507471 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
TSPAN17-206ENST00000507471 MT3P25713 68 aa3.8□□□□□ -1.8
TSPAN17-206ENST00000507471 CDC42SE1Q9NRR8 79 aa3.79□□□□□ -1.8
TSPAN17-206ENST00000507471 ROMO1P60602 79 aa3.73□□□□□ -1.81
TSPAN17-206ENST00000507471 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
TSPAN17-206ENST00000507471 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
TSPAN17-206ENST00000507471 BRK1Q8WUW1 75 aa3.51□□□□□ -1.85
TSPAN17-206ENST00000507471 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
TSPAN17-206ENST00000507471 PMAIP1Q13794 54 aa3.35□□□□□ -1.87
TSPAN17-206ENST00000507471 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
TSPAN17-206ENST00000507471 PRO0628Q9UI54 55 aa3.19□□□□□ -1.9
TSPAN17-206ENST00000507471 SVIPQ8NHG7 77 aa3.18□□□□□ -1.9
TSPAN17-206ENST00000507471 PRAC1Q96KF2 57 aa3.11□□□□□ -1.91
TSPAN17-206ENST00000507471 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
TSPAN17-206ENST00000507471 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
TSPAN17-206ENST00000507471 KTN1-AS1Q86SY8 53 aa3.02□□□□□ -1.93
TSPAN17-206ENST00000507471 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
TSPAN17-206ENST00000507471 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
TSPAN17-206ENST00000507471 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
TSPAN17-206ENST00000507471 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
TSPAN17-206ENST00000507471 LUZP6Q538Z0 58 aa2.72□□□□□ -1.97
TSPAN17-206ENST00000507471 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
TSPAN17-206ENST00000507471 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
TSPAN17-206ENST00000507471 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
TSPAN17-206ENST00000507471 NDUFAF8A1L188 74 aa2.23□□□□□ -2.05
TSPAN17-206ENST00000507471 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
TSPAN17-206ENST00000507471 H3BS24 57 aa2.14□□□□□ -2.07
TSPAN17-206ENST00000507471 A0A0A0MQY5 61 aa1.9□□□□□ -2.11
TSPAN17-206ENST00000507471 INE1O15225 51 aa1.89□□□□□ -2.11
TSPAN17-206ENST00000507471 PRM1P04553 51 aa1.89□□□□□ -2.11
TSPAN17-206ENST00000507471 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 96.8 ms