RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 A6NED7 52 aa7.07□□□□□ -1.28
LMNA-221ENST00000506981 LCE5AQ5TCM9 118 aa7.04□□□□□ -1.28
LMNA-221ENST00000506981 KRTAP25-1Q3LHN0 102 aa6.96□□□□□ -1.3
LMNA-221ENST00000506981 MT1GP13640 62 aa6.95□□□□□ -1.3
LMNA-221ENST00000506981 PP632Q6XCG6 107 aa6.95□□□□□ -1.3
LMNA-221ENST00000506981 MT1LQ93083 61 aa6.89□□□□□ -1.31
LMNA-221ENST00000506981 KRTAP12-3P60328 96 aa6.84□□□□□ -1.31
LMNA-221ENST00000506981 MT1MQ8N339 61 aa6.82□□□□□ -1.32
LMNA-221ENST00000506981 CDC42SE1Q9NRR8 79 aa6.8□□□□□ -1.32
LMNA-221ENST00000506981 DSTQ03001 7570 aaKnown RBP6.76□□□□□ -1.33
LMNA-221ENST00000506981 KRTAP23-1A1A580 65 aa6.69□□□□□ -1.34
LMNA-221ENST00000506981 ROMO1P60602 79 aa6.67□□□□□ -1.34
LMNA-221ENST00000506981 KRTAP4-3Q9BYR4 195 aa6.61□□□□□ -1.35
LMNA-221ENST00000506981 KRTAP4-7Q9BYR0 210 aa6.53□□□□□ -1.36
LMNA-221ENST00000506981 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
LMNA-221ENST00000506981 KRTAP4-9Q9BYQ8 210 aa6.48□□□□□ -1.37
LMNA-221ENST00000506981 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
LMNA-221ENST00000506981 LCE4AQ5TA78 99 aa6.47□□□□□ -1.37
LMNA-221ENST00000506981 LCE1DQ5T752 114 aa6.38□□□□□ -1.39
LMNA-221ENST00000506981 MT4P47944 62 aa6.36□□□□□ -1.39
LMNA-221ENST00000506981 KRTAP5-4Q6L8H1 288 aa6.33□□□□□ -1.4
LMNA-221ENST00000506981 BRK1Q8WUW1 75 aa6.32□□□□□ -1.4
LMNA-221ENST00000506981 LCE3CQ5T5A8 94 aa6.31□□□□□ -1.4
LMNA-221ENST00000506981 KRTAP5-5Q701N2 237 aaPredicted RBP6.19□□□□□ -1.42
LMNA-221ENST00000506981 LOC100996750A0A140TA64 210 aa6.18□□□□□ -1.42
LMNA-221ENST00000506981 HMCN1Q96RW7 5635 aa6.17□□□□□ -1.42
LMNA-221ENST00000506981 KRTAP4-6Q9BYQ5 205 aa6.15□□□□□ -1.42
LMNA-221ENST00000506981 KRTAP12-4P60329 112 aa6.05□□□□□ -1.44
LMNA-221ENST00000506981 GPR98Q8WXG9 6306 aa6□□□□□ -1.45
LMNA-221ENST00000506981 SPRR5A0A1B0GTR4 108 aa6□□□□□ -1.45
LMNA-221ENST00000506981 KRTAP20-2Q3LI61 65 aa5.99□□□□□ -1.45
LMNA-221ENST00000506981 PMAIP1Q13794 54 aa5.94□□□□□ -1.46
LMNA-221ENST00000506981 MT1AP04731 61 aa5.89□□□□□ -1.47
LMNA-221ENST00000506981 AHNAK2Q8IVF2 5795 aa5.89□□□□□ -1.47
LMNA-221ENST00000506981 KRTAP9-6A8MVA2 160 aa5.88□□□□□ -1.47
LMNA-221ENST00000506981 SYNE1Q8NF91 8797 aaKnown RBP5.88□□□□□ -1.47
LMNA-221ENST00000506981 KRTAP6-1Q3LI64 71 aa5.81□□□□□ -1.48
LMNA-221ENST00000506981 KRTAP5-10Q6L8G5 202 aa5.78□□□□□ -1.48
LMNA-221ENST00000506981 KRTAP5-3Q6L8H2 238 aa5.77□□□□□ -1.49
LMNA-221ENST00000506981 KRTAP9-4Q9BYQ2 154 aa5.65□□□□□ -1.5
LMNA-221ENST00000506981 PRO0628Q9UI54 55 aa5.65□□□□□ -1.5
LMNA-221ENST00000506981 PRAC1Q96KF2 57 aa5.64□□□□□ -1.51
LMNA-221ENST00000506981 KRTAP5-2Q701N4 177 aa5.59□□□□□ -1.51
LMNA-221ENST00000506981 KRTAP5-7Q6L8G8 165 aa5.54□□□□□ -1.52
LMNA-221ENST00000506981 KRTAP6-2Q3LI66 62 aa5.52□□□□□ -1.53
LMNA-221ENST00000506981 KRTAP4-11Q9BYQ6 195 aa5.41□□□□□ -1.54
LMNA-221ENST00000506981 MT3P25713 68 aa5.39□□□□□ -1.55
LMNA-221ENST00000506981 KTN1-AS1Q86SY8 53 aa5.39□□□□□ -1.55
LMNA-221ENST00000506981 KRTAP5-8O75690 187 aa5.21□□□□□ -1.58
LMNA-221ENST00000506981 SVIPQ8NHG7 77 aa5.2□□□□□ -1.58
LMNA-221ENST00000506981 OBSCNQ5VST9 7968 aa5.12□□□□□ -1.59
LMNA-221ENST00000506981 KRTAP5-1Q6L8H4 278 aa4.96□□□□□ -1.62
LMNA-221ENST00000506981 KRTAP9-9Q9BYP9 154 aa4.95□□□□□ -1.62
LMNA-221ENST00000506981 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
LMNA-221ENST00000506981 LUZP6Q538Z0 58 aa4.82□□□□□ -1.64
LMNA-221ENST00000506981 MUC5ACP98088 5654 aa4.79□□□□□ -1.64
LMNA-221ENST00000506981 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
LMNA-221ENST00000506981 AHNAKQ09666 5890 aaKnown RBP4.75□□□□□ -1.65
LMNA-221ENST00000506981 LCE3DQ9BYE3 92 aa4.61□□□□□ -1.67
LMNA-221ENST00000506981 LCE1BQ5T7P3 118 aa4.6□□□□□ -1.67
LMNA-221ENST00000506981 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
LMNA-221ENST00000506981 LCE1CQ5T751 118 aa4.51□□□□□ -1.69
LMNA-221ENST00000506981 LCE3EQ5T5B0 92 aa4.38□□□□□ -1.71
LMNA-221ENST00000506981 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.12□□□□□ -1.75
LMNA-221ENST00000506981 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
LMNA-221ENST00000506981 KRTAP4-12Q9BQ66 201 aa4.06□□□□□ -1.76
LMNA-221ENST00000506981 NDUFAF8A1L188 74 aa4□□□□□ -1.77
LMNA-221ENST00000506981 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
LMNA-221ENST00000506981 KRTAP21-2Q3LI59 83 aa3.8□□□□□ -1.8
LMNA-221ENST00000506981 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
LMNA-221ENST00000506981 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
LMNA-221ENST00000506981 PRM1P04553 51 aa3.41□□□□□ -1.86
LMNA-221ENST00000506981 A0A0A0MQY5 61 aa3.32□□□□□ -1.88
LMNA-221ENST00000506981 INE1O15225 51 aa3.27□□□□□ -1.89
LMNA-221ENST00000506981 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
LMNA-221ENST00000506981 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
LMNA-221ENST00000506981 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
LMNA-221ENST00000506981 H3BS24 57 aa1.9□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 62.6 ms