RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 MT4P47944 62 aa5.01□□□□□ -1.61
CDC42SE2-209ENST00000506419 TNP1P09430 55 aa5□□□□□ -1.61
CDC42SE2-209ENST00000506419 AHNAK2Q8IVF2 5795 aa5□□□□□ -1.61
CDC42SE2-209ENST00000506419 ANAPC13Q9BS18 74 aa4.97□□□□□ -1.61
CDC42SE2-209ENST00000506419 CCDC179H3BU77 68 aa4.95□□□□□ -1.62
CDC42SE2-209ENST00000506419 KRTAP5-4Q6L8H1 288 aa4.95□□□□□ -1.62
CDC42SE2-209ENST00000506419 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
CDC42SE2-209ENST00000506419 LINC01558Q9Y6Z2 57 aa4.89□□□□□ -1.63
CDC42SE2-209ENST00000506419 PRR15LQ9BU68 103 aa4.88□□□□□ -1.63
CDC42SE2-209ENST00000506419 KRTAP12-3P60328 96 aa4.86□□□□□ -1.63
CDC42SE2-209ENST00000506419 ATP5EP56381 51 aaPredicted RBP4.82□□□□□ -1.64
CDC42SE2-209ENST00000506419 KRTAP5-10Q6L8G5 202 aa4.78□□□□□ -1.64
CDC42SE2-209ENST00000506419 UQCR11O14957 56 aa4.75□□□□□ -1.65
CDC42SE2-209ENST00000506419 KRTAP5-5Q701N2 237 aaPredicted RBP4.72□□□□□ -1.65
CDC42SE2-209ENST00000506419 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
CDC42SE2-209ENST00000506419 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
CDC42SE2-209ENST00000506419 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
CDC42SE2-209ENST00000506419 TMEM258P61165 79 aa4.67□□□□□ -1.66
CDC42SE2-209ENST00000506419 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
CDC42SE2-209ENST00000506419 KRTAP4-12Q9BQ66 201 aa4.67□□□□□ -1.66
CDC42SE2-209ENST00000506419 KRTAP25-1Q3LHN0 102 aa4.66□□□□□ -1.66
CDC42SE2-209ENST00000506419 MIR22HGQ0VDD5 57 aa4.65□□□□□ -1.67
CDC42SE2-209ENST00000506419 KRTAP5-3Q6L8H2 238 aa4.65□□□□□ -1.67
CDC42SE2-209ENST00000506419 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
CDC42SE2-209ENST00000506419 KRTAP5-7Q6L8G8 165 aa4.6□□□□□ -1.67
CDC42SE2-209ENST00000506419 KRTAP12-4P60329 112 aa4.57□□□□□ -1.68
CDC42SE2-209ENST00000506419 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
CDC42SE2-209ENST00000506419 K7ERS5 55 aa4.51□□□□□ -1.69
CDC42SE2-209ENST00000506419 PSPHP1O15172 72 aa4.51□□□□□ -1.69
CDC42SE2-209ENST00000506419 KRTAP15-1Q3LI76 137 aa4.51□□□□□ -1.69
CDC42SE2-209ENST00000506419 KRTAP23-1A1A580 65 aa4.5□□□□□ -1.69
CDC42SE2-209ENST00000506419 LCE3CQ5T5A8 94 aa4.48□□□□□ -1.69
CDC42SE2-209ENST00000506419 Q1T7F1 81 aa4.46□□□□□ -1.7
CDC42SE2-209ENST00000506419 V9GYY9 64 aa4.44□□□□□ -1.7
CDC42SE2-209ENST00000506419 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
CDC42SE2-209ENST00000506419 MT1AP04731 61 aa4.33□□□□□ -1.72
CDC42SE2-209ENST00000506419 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
CDC42SE2-209ENST00000506419 KRTAP5-2Q701N4 177 aa4.32□□□□□ -1.72
CDC42SE2-209ENST00000506419 A6NED7 52 aa4.3□□□□□ -1.72
CDC42SE2-209ENST00000506419 KRTAP4-11Q9BYQ6 195 aa4.3□□□□□ -1.72
CDC42SE2-209ENST00000506419 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
CDC42SE2-209ENST00000506419 SVIPQ8NHG7 77 aa4.28□□□□□ -1.72
CDC42SE2-209ENST00000506419 CDC42SE1Q9NRR8 79 aa4.28□□□□□ -1.72
CDC42SE2-209ENST00000506419 ROMO1P60602 79 aa4.25□□□□□ -1.73
CDC42SE2-209ENST00000506419 RPS28P62857 69 aaKnown RBP4.2□□□□□ -1.74
CDC42SE2-209ENST00000506419 AHNAKQ09666 5890 aaKnown RBP4.18□□□□□ -1.74
CDC42SE2-209ENST00000506419 KRTAP6-2Q3LI66 62 aa4.17□□□□□ -1.74
CDC42SE2-209ENST00000506419 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
CDC42SE2-209ENST00000506419 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
CDC42SE2-209ENST00000506419 MUC5BQ9HC84 5762 aaPredicted RBP4.16□□□□□ -1.74
CDC42SE2-209ENST00000506419 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
CDC42SE2-209ENST00000506419 MT3P25713 68 aa3.97□□□□□ -1.77
CDC42SE2-209ENST00000506419 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
CDC42SE2-209ENST00000506419 PCP4P48539 62 aa3.88□□□□□ -1.79
CDC42SE2-209ENST00000506419 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
CDC42SE2-209ENST00000506419 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
CDC42SE2-209ENST00000506419 BRK1Q8WUW1 75 aa3.52□□□□□ -1.85
CDC42SE2-209ENST00000506419 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
CDC42SE2-209ENST00000506419 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
CDC42SE2-209ENST00000506419 PMAIP1Q13794 54 aa3.31□□□□□ -1.88
CDC42SE2-209ENST00000506419 PRAC1Q96KF2 57 aa3.3□□□□□ -1.88
CDC42SE2-209ENST00000506419 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
CDC42SE2-209ENST00000506419 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
CDC42SE2-209ENST00000506419 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
CDC42SE2-209ENST00000506419 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
CDC42SE2-209ENST00000506419 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
CDC42SE2-209ENST00000506419 PRO0628Q9UI54 55 aa2.89□□□□□ -1.95
CDC42SE2-209ENST00000506419 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
CDC42SE2-209ENST00000506419 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
CDC42SE2-209ENST00000506419 KTN1-AS1Q86SY8 53 aa2.8□□□□□ -1.96
CDC42SE2-209ENST00000506419 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
CDC42SE2-209ENST00000506419 LUZP6Q538Z0 58 aa2.7□□□□□ -1.98
CDC42SE2-209ENST00000506419 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
CDC42SE2-209ENST00000506419 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
CDC42SE2-209ENST00000506419 PRM1P04553 51 aa2.18□□□□□ -2.06
CDC42SE2-209ENST00000506419 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
CDC42SE2-209ENST00000506419 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
CDC42SE2-209ENST00000506419 INE1O15225 51 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 88 ms