RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 A8MU10 97 aa6.91□□□□□ -1.3
SMN1-204ENST00000506163 Q1T7F1 81 aa6.91□□□□□ -1.3
SMN1-204ENST00000506163 KRTAP20-1Q3LI63 56 aa6.89□□□□□ -1.31
SMN1-204ENST00000506163 LINC01558Q9Y6Z2 57 aa6.88□□□□□ -1.31
SMN1-204ENST00000506163 PRR15LQ9BU68 103 aa6.8□□□□□ -1.32
SMN1-204ENST00000506163 KRTAP2-3P0C7H8 128 aa6.76□□□□□ -1.33
SMN1-204ENST00000506163 KRTAP2-4Q9BYR9 128 aa6.76□□□□□ -1.33
SMN1-204ENST00000506163 KRTAP19-7Q3SYF9 63 aa6.73□□□□□ -1.33
SMN1-204ENST00000506163 SPRR2DP22532 72 aa6.7□□□□□ -1.34
SMN1-204ENST00000506163 C10orf95Q9H7T3 257 aa6.68□□□□□ -1.34
SMN1-204ENST00000506163 KRTAP23-1A1A580 65 aa6.64□□□□□ -1.35
SMN1-204ENST00000506163 MT1EP04732 61 aa6.64□□□□□ -1.35
SMN1-204ENST00000506163 UQCR11O14957 56 aa6.62□□□□□ -1.35
SMN1-204ENST00000506163 CDC42SE1Q9NRR8 79 aa6.6□□□□□ -1.35
SMN1-204ENST00000506163 KRTAP19-5Q3LI72 72 aa6.59□□□□□ -1.36
SMN1-204ENST00000506163 KRTAP2-2Q9BYT5 123 aa6.57□□□□□ -1.36
SMN1-204ENST00000506163 KRTAP2-1Q9BYU5 128 aa6.57□□□□□ -1.36
SMN1-204ENST00000506163 TNP1P09430 55 aa6.52□□□□□ -1.37
SMN1-204ENST00000506163 KRTAP19-3Q7Z4W3 81 aa6.52□□□□□ -1.37
SMN1-204ENST00000506163 MIR22HGQ0VDD5 57 aa6.51□□□□□ -1.37
SMN1-204ENST00000506163 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
SMN1-204ENST00000506163 ROMO1P60602 79 aa6.44□□□□□ -1.38
SMN1-204ENST00000506163 DSTQ03001 7570 aaKnown RBP6.42□□□□□ -1.38
SMN1-204ENST00000506163 A6NED7 52 aa6.4□□□□□ -1.39
SMN1-204ENST00000506163 K7ERS5 55 aa6.4□□□□□ -1.39
SMN1-204ENST00000506163 LUZP6Q538Z0 58 aa6.39□□□□□ -1.39
SMN1-204ENST00000506163 PRAC1Q96KF2 57 aa6.39□□□□□ -1.39
SMN1-204ENST00000506163 MT1GP13640 62 aa6.38□□□□□ -1.39
SMN1-204ENST00000506163 MT1LQ93083 61 aa6.38□□□□□ -1.39
SMN1-204ENST00000506163 MT1MQ8N339 61 aa6.3□□□□□ -1.4
SMN1-204ENST00000506163 PP632Q6XCG6 107 aa6.25□□□□□ -1.41
SMN1-204ENST00000506163 KRTAP12-3P60328 96 aa6.24□□□□□ -1.41
SMN1-204ENST00000506163 KRTAP25-1Q3LHN0 102 aa6.24□□□□□ -1.41
SMN1-204ENST00000506163 KRTAP4-3Q9BYR4 195 aa6.22□□□□□ -1.41
SMN1-204ENST00000506163 NDUFAF8A1L188 74 aa5.97□□□□□ -1.45
SMN1-204ENST00000506163 KRTAP5-4Q6L8H1 288 aa5.91□□□□□ -1.46
SMN1-204ENST00000506163 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
SMN1-204ENST00000506163 MT4P47944 62 aa5.88□□□□□ -1.47
SMN1-204ENST00000506163 HMCN1Q96RW7 5635 aa5.84□□□□□ -1.47
SMN1-204ENST00000506163 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.82□□□□□ -1.48
SMN1-204ENST00000506163 KRTAP5-5Q701N2 237 aaPredicted RBP5.79□□□□□ -1.48
SMN1-204ENST00000506163 LCE3CQ5T5A8 94 aa5.77□□□□□ -1.49
SMN1-204ENST00000506163 GPR98Q8WXG9 6306 aa5.71□□□□□ -1.5
SMN1-204ENST00000506163 AHNAK2Q8IVF2 5795 aa5.58□□□□□ -1.52
SMN1-204ENST00000506163 SYNE1Q8NF91 8797 aaKnown RBP5.58□□□□□ -1.52
SMN1-204ENST00000506163 KRTAP20-2Q3LI61 65 aa5.56□□□□□ -1.52
SMN1-204ENST00000506163 KRTAP9-6A8MVA2 160 aa5.53□□□□□ -1.52
SMN1-204ENST00000506163 SPRR5A0A1B0GTR4 108 aa5.52□□□□□ -1.53
SMN1-204ENST00000506163 KRTAP12-4P60329 112 aa5.5□□□□□ -1.53
SMN1-204ENST00000506163 KRTAP5-10Q6L8G5 202 aa5.43□□□□□ -1.54
SMN1-204ENST00000506163 MT1AP04731 61 aa5.4□□□□□ -1.54
SMN1-204ENST00000506163 KRTAP6-1Q3LI64 71 aa5.4□□□□□ -1.54
SMN1-204ENST00000506163 KRTAP5-11Q6L8G4 156 aa5.25□□□□□ -1.57
SMN1-204ENST00000506163 KRTAP5-2Q701N4 177 aa5.22□□□□□ -1.57
SMN1-204ENST00000506163 KRTAP5-7Q6L8G8 165 aa5.18□□□□□ -1.58
SMN1-204ENST00000506163 INE1O15225 51 aa5.14□□□□□ -1.59
SMN1-204ENST00000506163 KRTAP6-2Q3LI66 62 aa5.11□□□□□ -1.59
SMN1-204ENST00000506163 KRTAP5-1Q6L8H4 278 aa4.95□□□□□ -1.62
SMN1-204ENST00000506163 MT3P25713 68 aa4.91□□□□□ -1.62
SMN1-204ENST00000506163 OBSCNQ5VST9 7968 aa4.88□□□□□ -1.63
SMN1-204ENST00000506163 KRTAP5-8O75690 187 aa4.88□□□□□ -1.63
SMN1-204ENST00000506163 KRTAP4-4Q9BYR3 166 aa4.84□□□□□ -1.63
SMN1-204ENST00000506163 MUC5BQ9HC84 5762 aaPredicted RBP4.58□□□□□ -1.68
SMN1-204ENST00000506163 MUC5ACP98088 5654 aa4.56□□□□□ -1.68
SMN1-204ENST00000506163 LCE1EQ5T753 118 aa4.54□□□□□ -1.68
SMN1-204ENST00000506163 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
SMN1-204ENST00000506163 LCE1BQ5T7P3 118 aa4.21□□□□□ -1.73
SMN1-204ENST00000506163 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
SMN1-204ENST00000506163 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
SMN1-204ENST00000506163 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
SMN1-204ENST00000506163 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
SMN1-204ENST00000506163 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
SMN1-204ENST00000506163 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
SMN1-204ENST00000506163 PRM1P04553 51 aa3.08□□□□□ -1.92
SMN1-204ENST00000506163 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
SMN1-204ENST00000506163 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
SMN1-204ENST00000506163 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms