RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 TNP1P09430 55 aa7.68□□□□□ -1.18
SUDS3P1-201ENST00000505831 AHNAK2Q8IVF2 5795 aa7.66□□□□□ -1.18
SUDS3P1-201ENST00000505831 KRTAP5-10Q6L8G5 202 aa7.5□□□□□ -1.21
SUDS3P1-201ENST00000505831 KRTAP4-7Q9BYR0 210 aa7.49□□□□□ -1.21
SUDS3P1-201ENST00000505831 KRTAP4-12Q9BQ66 201 aa7.48□□□□□ -1.21
SUDS3P1-201ENST00000505831 KRTAP12-3P60328 96 aa7.45□□□□□ -1.22
SUDS3P1-201ENST00000505831 ANAPC13Q9BS18 74 aa7.41□□□□□ -1.22
SUDS3P1-201ENST00000505831 PRR15LQ9BU68 103 aa7.4□□□□□ -1.22
SUDS3P1-201ENST00000505831 LINC01558Q9Y6Z2 57 aa7.36□□□□□ -1.23
SUDS3P1-201ENST00000505831 CCDC179H3BU77 68 aa7.33□□□□□ -1.24
SUDS3P1-201ENST00000505831 KRTAP5-5Q701N2 237 aaPredicted RBP7.32□□□□□ -1.24
SUDS3P1-201ENST00000505831 KRTAP9-9Q9BYP9 154 aa7.3□□□□□ -1.24
SUDS3P1-201ENST00000505831 KRTAP9-4Q9BYQ2 154 aa7.3□□□□□ -1.24
SUDS3P1-201ENST00000505831 ATP5EP56381 51 aaPredicted RBP7.29□□□□□ -1.24
SUDS3P1-201ENST00000505831 KRTAP5-3Q6L8H2 238 aa7.28□□□□□ -1.24
SUDS3P1-201ENST00000505831 KRTAP20-2Q3LI61 65 aa7.26□□□□□ -1.25
SUDS3P1-201ENST00000505831 KRTAP5-7Q6L8G8 165 aa7.24□□□□□ -1.25
SUDS3P1-201ENST00000505831 SPRR5A0A1B0GTR4 108 aa7.22□□□□□ -1.25
SUDS3P1-201ENST00000505831 UQCR11O14957 56 aa7.19□□□□□ -1.26
SUDS3P1-201ENST00000505831 KRTAP25-1Q3LHN0 102 aa7.14□□□□□ -1.27
SUDS3P1-201ENST00000505831 SYNE1Q8NF91 8797 aaKnown RBP7.13□□□□□ -1.27
SUDS3P1-201ENST00000505831 KRTAP12-4P60329 112 aa7.11□□□□□ -1.27
SUDS3P1-201ENST00000505831 KRTAP19-4Q3LI73 84 aa7.07□□□□□ -1.28
SUDS3P1-201ENST00000505831 TMEM258P61165 79 aa7□□□□□ -1.29
SUDS3P1-201ENST00000505831 MIR22HGQ0VDD5 57 aa7□□□□□ -1.29
SUDS3P1-201ENST00000505831 KRTAP23-1A1A580 65 aa6.91□□□□□ -1.3
SUDS3P1-201ENST00000505831 KRTAP15-1Q3LI76 137 aa6.89□□□□□ -1.31
SUDS3P1-201ENST00000505831 K7ERS5 55 aa6.86□□□□□ -1.31
SUDS3P1-201ENST00000505831 LCE3CQ5T5A8 94 aa6.86□□□□□ -1.31
SUDS3P1-201ENST00000505831 KRTAP5-2Q701N4 177 aa6.73□□□□□ -1.33
SUDS3P1-201ENST00000505831 PSPHP1O15172 72 aa6.71□□□□□ -1.34
SUDS3P1-201ENST00000505831 MT1AP04731 61 aa6.7□□□□□ -1.34
SUDS3P1-201ENST00000505831 KRTAP4-11Q9BYQ6 195 aa6.69□□□□□ -1.34
SUDS3P1-201ENST00000505831 Q1T7F1 81 aa6.68□□□□□ -1.34
SUDS3P1-201ENST00000505831 KRTAP6-1Q3LI64 71 aa6.68□□□□□ -1.34
SUDS3P1-201ENST00000505831 V9GYY9 64 aa6.68□□□□□ -1.34
SUDS3P1-201ENST00000505831 KRTAP4-2Q9BYR5 136 aa6.62□□□□□ -1.35
SUDS3P1-201ENST00000505831 KRTAP9-6A8MVA2 160 aa6.53□□□□□ -1.36
SUDS3P1-201ENST00000505831 OBSCNQ5VST9 7968 aa6.51□□□□□ -1.37
SUDS3P1-201ENST00000505831 KRTAP5-8O75690 187 aa6.5□□□□□ -1.37
SUDS3P1-201ENST00000505831 CDC42SE1Q9NRR8 79 aa6.48□□□□□ -1.37
SUDS3P1-201ENST00000505831 A6NED7 52 aa6.44□□□□□ -1.38
SUDS3P1-201ENST00000505831 KRTAP6-2Q3LI66 62 aa6.42□□□□□ -1.38
SUDS3P1-201ENST00000505831 ROMO1P60602 79 aa6.4□□□□□ -1.38
SUDS3P1-201ENST00000505831 H3BS24 57 aa6.39□□□□□ -1.39
SUDS3P1-201ENST00000505831 RPS28P62857 69 aaKnown RBP6.39□□□□□ -1.39
SUDS3P1-201ENST00000505831 AHNAKQ09666 5890 aaKnown RBP6.36□□□□□ -1.39
SUDS3P1-201ENST00000505831 MUC5ACP98088 5654 aa6.34□□□□□ -1.39
SUDS3P1-201ENST00000505831 MUC5BQ9HC84 5762 aaPredicted RBP6.32□□□□□ -1.4
SUDS3P1-201ENST00000505831 MT3P25713 68 aa6.12□□□□□ -1.43
SUDS3P1-201ENST00000505831 KRTAP5-1Q6L8H4 278 aa6.07□□□□□ -1.44
SUDS3P1-201ENST00000505831 LCE1EQ5T753 118 aa5.73□□□□□ -1.49
SUDS3P1-201ENST00000505831 PCP4P48539 62 aa5.61□□□□□ -1.51
SUDS3P1-201ENST00000505831 LCE1BQ5T7P3 118 aa5.33□□□□□ -1.56
SUDS3P1-201ENST00000505831 LCE1CQ5T751 118 aa5.31□□□□□ -1.56
SUDS3P1-201ENST00000505831 BRK1Q8WUW1 75 aa5.17□□□□□ -1.58
SUDS3P1-201ENST00000505831 LCE3DQ9BYE3 92 aa4.88□□□□□ -1.63
SUDS3P1-201ENST00000505831 PMAIP1Q13794 54 aa4.86□□□□□ -1.63
SUDS3P1-201ENST00000505831 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.83□□□□□ -1.64
SUDS3P1-201ENST00000505831 KRTAP5-11Q6L8G4 156 aa4.82□□□□□ -1.64
SUDS3P1-201ENST00000505831 PRAC1Q96KF2 57 aa4.78□□□□□ -1.64
SUDS3P1-201ENST00000505831 LCE1FQ5T754 118 aa4.76□□□□□ -1.65
SUDS3P1-201ENST00000505831 LCE3EQ5T5B0 92 aa4.55□□□□□ -1.68
SUDS3P1-201ENST00000505831 KRTAP21-2Q3LI59 83 aa4.44□□□□□ -1.7
SUDS3P1-201ENST00000505831 PHGR1C9JFL3 82 aa4.33□□□□□ -1.72
SUDS3P1-201ENST00000505831 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
SUDS3P1-201ENST00000505831 KTN1-AS1Q86SY8 53 aa4.09□□□□□ -1.75
SUDS3P1-201ENST00000505831 KRTAP4-4Q9BYR3 166 aa4.05□□□□□ -1.76
SUDS3P1-201ENST00000505831 LUZP6Q538Z0 58 aa4.04□□□□□ -1.76
SUDS3P1-201ENST00000505831 MUC19Q7Z5P9 8384 aa4.01□□□□□ -1.77
SUDS3P1-201ENST00000505831 SVIPQ8NHG7 77 aa3.95□□□□□ -1.78
SUDS3P1-201ENST00000505831 KRTAP21-1Q3LI58 79 aa3.3□□□□□ -1.88
SUDS3P1-201ENST00000505831 A0A0A0MQY5 61 aa3.28□□□□□ -1.88
SUDS3P1-201ENST00000505831 PRM1P04553 51 aa3.25□□□□□ -1.89
SUDS3P1-201ENST00000505831 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
SUDS3P1-201ENST00000505831 MUC16Q8WXI7 14507 aa2.78□□□□□ -1.97
SUDS3P1-201ENST00000505831 INE1O15225 51 aa2.23□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 122.7 ms