RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 HMCN1Q96RW7 5635 aa4.3□□□□□ -1.72
SNHG4-202ENST00000505522 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
SNHG4-202ENST00000505522 LCE3AQ5TA76 89 aa4.25□□□□□ -1.73
SNHG4-202ENST00000505522 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
SNHG4-202ENST00000505522 C10orf95Q9H7T3 257 aa4.25□□□□□ -1.73
SNHG4-202ENST00000505522 SMIM26A0A096LP01 95 aa4.21□□□□□ -1.74
SNHG4-202ENST00000505522 A8MU10 97 aa4.21□□□□□ -1.74
SNHG4-202ENST00000505522 COX7CP15954 63 aa4.2□□□□□ -1.74
SNHG4-202ENST00000505522 KRTAP5-10Q6L8G5 202 aa4.2□□□□□ -1.74
SNHG4-202ENST00000505522 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
SNHG4-202ENST00000505522 H7BZZ5 65 aa4.19□□□□□ -1.74
SNHG4-202ENST00000505522 A0A1B0GU69 56 aa4.17□□□□□ -1.74
SNHG4-202ENST00000505522 TNP1P09430 55 aa4.17□□□□□ -1.74
SNHG4-202ENST00000505522 KRTAP12-3P60328 96 aa4.07□□□□□ -1.76
SNHG4-202ENST00000505522 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
SNHG4-202ENST00000505522 KRTAP20-2Q3LI61 65 aa4.03□□□□□ -1.76
SNHG4-202ENST00000505522 KRTAP5-5Q701N2 237 aaPredicted RBP4.02□□□□□ -1.77
SNHG4-202ENST00000505522 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
SNHG4-202ENST00000505522 PRR15LQ9BU68 103 aa3.97□□□□□ -1.77
SNHG4-202ENST00000505522 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
SNHG4-202ENST00000505522 ANAPC13Q9BS18 74 aa3.93□□□□□ -1.78
SNHG4-202ENST00000505522 LINC01558Q9Y6Z2 57 aa3.92□□□□□ -1.78
SNHG4-202ENST00000505522 CCDC179H3BU77 68 aa3.9□□□□□ -1.79
SNHG4-202ENST00000505522 ATP5EP56381 51 aaPredicted RBP3.86□□□□□ -1.79
SNHG4-202ENST00000505522 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
SNHG4-202ENST00000505522 UQCR11O14957 56 aa3.85□□□□□ -1.79
SNHG4-202ENST00000505522 KRTAP25-1Q3LHN0 102 aa3.85□□□□□ -1.79
SNHG4-202ENST00000505522 MIR22HGQ0VDD5 57 aa3.76□□□□□ -1.81
SNHG4-202ENST00000505522 KRTAP15-1Q3LI76 137 aa3.74□□□□□ -1.81
SNHG4-202ENST00000505522 LCE3CQ5T5A8 94 aa3.73□□□□□ -1.81
SNHG4-202ENST00000505522 KRTAP23-1A1A580 65 aa3.71□□□□□ -1.82
SNHG4-202ENST00000505522 TMEM258P61165 79 aa3.7□□□□□ -1.82
SNHG4-202ENST00000505522 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
SNHG4-202ENST00000505522 KRTAP6-1Q3LI64 71 aa3.69□□□□□ -1.82
SNHG4-202ENST00000505522 K7ERS5 55 aa3.68□□□□□ -1.82
SNHG4-202ENST00000505522 MT1AP04731 61 aa3.68□□□□□ -1.82
SNHG4-202ENST00000505522 SVIPQ8NHG7 77 aa3.65□□□□□ -1.83
SNHG4-202ENST00000505522 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
SNHG4-202ENST00000505522 PSPHP1O15172 72 aa3.59□□□□□ -1.83
SNHG4-202ENST00000505522 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
SNHG4-202ENST00000505522 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
SNHG4-202ENST00000505522 V9GYY9 64 aa3.53□□□□□ -1.84
SNHG4-202ENST00000505522 Q1T7F1 81 aa3.52□□□□□ -1.85
SNHG4-202ENST00000505522 CDC42SE1Q9NRR8 79 aa3.49□□□□□ -1.85
SNHG4-202ENST00000505522 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
SNHG4-202ENST00000505522 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
SNHG4-202ENST00000505522 RPS28P62857 69 aaKnown RBP3.46□□□□□ -1.86
SNHG4-202ENST00000505522 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
SNHG4-202ENST00000505522 A6NED7 52 aa3.44□□□□□ -1.86
SNHG4-202ENST00000505522 ROMO1P60602 79 aa3.43□□□□□ -1.86
SNHG4-202ENST00000505522 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
SNHG4-202ENST00000505522 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
SNHG4-202ENST00000505522 MT3P25713 68 aa3.36□□□□□ -1.87
SNHG4-202ENST00000505522 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
SNHG4-202ENST00000505522 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
SNHG4-202ENST00000505522 PCP4P48539 62 aa3.25□□□□□ -1.89
SNHG4-202ENST00000505522 A0A0A0MQY5 61 aa3.19□□□□□ -1.9
SNHG4-202ENST00000505522 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
SNHG4-202ENST00000505522 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
SNHG4-202ENST00000505522 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
SNHG4-202ENST00000505522 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
SNHG4-202ENST00000505522 BRK1Q8WUW1 75 aa2.72□□□□□ -1.97
SNHG4-202ENST00000505522 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
SNHG4-202ENST00000505522 PRAC1Q96KF2 57 aa2.63□□□□□ -1.99
SNHG4-202ENST00000505522 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
SNHG4-202ENST00000505522 PMAIP1Q13794 54 aa2.53□□□□□ -2
SNHG4-202ENST00000505522 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
SNHG4-202ENST00000505522 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
SNHG4-202ENST00000505522 NDUFAF8A1L188 74 aa2.43□□□□□ -2.02
SNHG4-202ENST00000505522 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
SNHG4-202ENST00000505522 LUZP6Q538Z0 58 aa2.12□□□□□ -2.07
SNHG4-202ENST00000505522 PRO0628Q9UI54 55 aa2.12□□□□□ -2.07
SNHG4-202ENST00000505522 KTN1-AS1Q86SY8 53 aa2.1□□□□□ -2.07
SNHG4-202ENST00000505522 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
SNHG4-202ENST00000505522 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
SNHG4-202ENST00000505522 PRM1P04553 51 aa1.76□□□□□ -2.13
SNHG4-202ENST00000505522 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
SNHG4-202ENST00000505522 INE1O15225 51 aa1.09□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 138.1 ms