RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 COA5Q86WW8 74 aa3.97□□□□□ -1.77
UBE2D3-219ENST00000505207 MT1MQ8N339 61 aa3.96□□□□□ -1.78
UBE2D3-219ENST00000505207 SERP2Q8N6R1 65 aa3.96□□□□□ -1.78
UBE2D3-219ENST00000505207 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
UBE2D3-219ENST00000505207 KRTAP12-1P59990 96 aa3.93□□□□□ -1.78
UBE2D3-219ENST00000505207 MT1LQ93083 61 aa3.92□□□□□ -1.78
UBE2D3-219ENST00000505207 SMIM26A0A096LP01 95 aa3.9□□□□□ -1.79
UBE2D3-219ENST00000505207 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
UBE2D3-219ENST00000505207 TNP1P09430 55 aa3.87□□□□□ -1.79
UBE2D3-219ENST00000505207 C10orf95Q9H7T3 257 aa3.85□□□□□ -1.79
UBE2D3-219ENST00000505207 KRTAP5-10Q6L8G5 202 aa3.84□□□□□ -1.79
UBE2D3-219ENST00000505207 AHNAK2Q8IVF2 5795 aa3.83□□□□□ -1.8
UBE2D3-219ENST00000505207 A0A1B0GU69 56 aa3.83□□□□□ -1.8
UBE2D3-219ENST00000505207 LCE3AQ5TA76 89 aa3.82□□□□□ -1.8
UBE2D3-219ENST00000505207 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
UBE2D3-219ENST00000505207 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
UBE2D3-219ENST00000505207 COX7CP15954 63 aa3.77□□□□□ -1.81
UBE2D3-219ENST00000505207 A8MU10 97 aa3.76□□□□□ -1.81
UBE2D3-219ENST00000505207 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
UBE2D3-219ENST00000505207 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
UBE2D3-219ENST00000505207 H7BZZ5 65 aa3.73□□□□□ -1.81
UBE2D3-219ENST00000505207 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
UBE2D3-219ENST00000505207 KRTAP12-3P60328 96 aa3.72□□□□□ -1.81
UBE2D3-219ENST00000505207 PRR15LQ9BU68 103 aa3.7□□□□□ -1.82
UBE2D3-219ENST00000505207 PRAC1Q96KF2 57 aa3.69□□□□□ -1.82
UBE2D3-219ENST00000505207 SPRR5A0A1B0GTR4 108 aa3.68□□□□□ -1.82
UBE2D3-219ENST00000505207 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
UBE2D3-219ENST00000505207 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
UBE2D3-219ENST00000505207 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
UBE2D3-219ENST00000505207 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
UBE2D3-219ENST00000505207 KRTAP25-1Q3LHN0 102 aa3.56□□□□□ -1.84
UBE2D3-219ENST00000505207 UQCR11O14957 56 aa3.54□□□□□ -1.84
UBE2D3-219ENST00000505207 ATP5EP56381 51 aaPredicted RBP3.54□□□□□ -1.84
UBE2D3-219ENST00000505207 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
UBE2D3-219ENST00000505207 LINC01558Q9Y6Z2 57 aa3.54□□□□□ -1.84
UBE2D3-219ENST00000505207 ANAPC13Q9BS18 74 aa3.53□□□□□ -1.84
UBE2D3-219ENST00000505207 K7ERS5 55 aa3.49□□□□□ -1.85
UBE2D3-219ENST00000505207 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
UBE2D3-219ENST00000505207 MIR22HGQ0VDD5 57 aa3.42□□□□□ -1.86
UBE2D3-219ENST00000505207 CCDC179H3BU77 68 aa3.41□□□□□ -1.86
UBE2D3-219ENST00000505207 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.87
UBE2D3-219ENST00000505207 MT1AP04731 61 aa3.35□□□□□ -1.87
UBE2D3-219ENST00000505207 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
UBE2D3-219ENST00000505207 TMEM258P61165 79 aa3.33□□□□□ -1.88
UBE2D3-219ENST00000505207 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
UBE2D3-219ENST00000505207 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
UBE2D3-219ENST00000505207 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
UBE2D3-219ENST00000505207 V9GYY9 64 aa3.27□□□□□ -1.89
UBE2D3-219ENST00000505207 KRTAP5-1Q6L8H4 278 aa3.25□□□□□ -1.89
UBE2D3-219ENST00000505207 RPS28P62857 69 aaKnown RBP3.23□□□□□ -1.89
UBE2D3-219ENST00000505207 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
UBE2D3-219ENST00000505207 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
UBE2D3-219ENST00000505207 PSPHP1O15172 72 aa3.21□□□□□ -1.9
UBE2D3-219ENST00000505207 CDC42SE1Q9NRR8 79 aa3.21□□□□□ -1.9
UBE2D3-219ENST00000505207 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
UBE2D3-219ENST00000505207 MUC5BQ9HC84 5762 aaPredicted RBP3.2□□□□□ -1.9
UBE2D3-219ENST00000505207 Q1T7F1 81 aa3.19□□□□□ -1.9
UBE2D3-219ENST00000505207 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
UBE2D3-219ENST00000505207 A6NED7 52 aa3.13□□□□□ -1.91
UBE2D3-219ENST00000505207 ROMO1P60602 79 aa3.13□□□□□ -1.91
UBE2D3-219ENST00000505207 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
UBE2D3-219ENST00000505207 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
UBE2D3-219ENST00000505207 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
UBE2D3-219ENST00000505207 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
UBE2D3-219ENST00000505207 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
UBE2D3-219ENST00000505207 BRK1Q8WUW1 75 aa2.42□□□□□ -2.02
UBE2D3-219ENST00000505207 PMAIP1Q13794 54 aa2.29□□□□□ -2.04
UBE2D3-219ENST00000505207 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
UBE2D3-219ENST00000505207 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
UBE2D3-219ENST00000505207 LUZP6Q538Z0 58 aa2.03□□□□□ -2.08
UBE2D3-219ENST00000505207 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
UBE2D3-219ENST00000505207 PRO0628Q9UI54 55 aa1.87□□□□□ -2.11
UBE2D3-219ENST00000505207 KTN1-AS1Q86SY8 53 aa1.85□□□□□ -2.11
UBE2D3-219ENST00000505207 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
UBE2D3-219ENST00000505207 PRM1P04553 51 aa1.55□□□□□ -2.16
UBE2D3-219ENST00000505207 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
UBE2D3-219ENST00000505207 INE1O15225 51 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 13.4 ms