RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 K7ERS5 55 aa9.2□□□□□ -0.94
PVT1-201ENST00000504719 DSTQ03001 7570 aaKnown RBP9.15□□□□□ -0.94
PVT1-201ENST00000504719 A6NED7 52 aa9.15□□□□□ -0.94
PVT1-201ENST00000504719 MT1GP13640 62 aa9.15□□□□□ -0.94
PVT1-201ENST00000504719 PP632Q6XCG6 107 aa9.05□□□□□ -0.96
PVT1-201ENST00000504719 MT1LQ93083 61 aa9.02□□□□□ -0.97
PVT1-201ENST00000504719 MT1MQ8N339 61 aa9□□□□□ -0.97
PVT1-201ENST00000504719 KRTAP25-1Q3LHN0 102 aa8.98□□□□□ -0.97
PVT1-201ENST00000504719 KRTAP4-9Q9BYQ8 210 aa8.96□□□□□ -0.98
PVT1-201ENST00000504719 KRTAP12-3P60328 96 aa8.85□□□□□ -0.99
PVT1-201ENST00000504719 KRTAP4-3Q9BYR4 195 aa8.78□□□□□ -1
PVT1-201ENST00000504719 CDC42SE1Q9NRR8 79 aa8.78□□□□□ -1
PVT1-201ENST00000504719 LCE1DQ5T752 114 aa8.76□□□□□ -1.01
PVT1-201ENST00000504719 LCE4AQ5TA78 99 aa8.76□□□□□ -1.01
PVT1-201ENST00000504719 MT4P47944 62 aa8.65□□□□□ -1.02
PVT1-201ENST00000504719 KRTAP23-1A1A580 65 aa8.64□□□□□ -1.03
PVT1-201ENST00000504719 ROMO1P60602 79 aa8.64□□□□□ -1.03
PVT1-201ENST00000504719 KRTAP5-4Q6L8H1 288 aa8.6□□□□□ -1.03
PVT1-201ENST00000504719 GPR98Q8WXG9 6306 aa8.59□□□□□ -1.03
PVT1-201ENST00000504719 KRTAP4-7Q9BYR0 210 aa8.58□□□□□ -1.04
PVT1-201ENST00000504719 HMCN1Q96RW7 5635 aa8.55□□□□□ -1.04
PVT1-201ENST00000504719 KRTAP4-6Q9BYQ5 205 aa8.42□□□□□ -1.06
PVT1-201ENST00000504719 KRTAP15-1Q3LI76 137 aa8.38□□□□□ -1.07
PVT1-201ENST00000504719 KRTAP19-4Q3LI73 84 aa8.32□□□□□ -1.08
PVT1-201ENST00000504719 AHNAK2Q8IVF2 5795 aa8.26□□□□□ -1.09
PVT1-201ENST00000504719 KRTAP5-5Q701N2 237 aaPredicted RBP8.26□□□□□ -1.09
PVT1-201ENST00000504719 BRK1Q8WUW1 75 aa8.21□□□□□ -1.1
PVT1-201ENST00000504719 LCE3CQ5T5A8 94 aa8.18□□□□□ -1.1
PVT1-201ENST00000504719 KRTAP5-10Q6L8G5 202 aa8.16□□□□□ -1.1
PVT1-201ENST00000504719 LOC100996750A0A140TA64 210 aa8.13□□□□□ -1.11
PVT1-201ENST00000504719 KRTAP20-2Q3LI61 65 aa8.11□□□□□ -1.11
PVT1-201ENST00000504719 SPRR5A0A1B0GTR4 108 aa8.07□□□□□ -1.12
PVT1-201ENST00000504719 KRTAP12-4P60329 112 aa8.03□□□□□ -1.12
PVT1-201ENST00000504719 KRTAP5-3Q6L8H2 238 aa7.97□□□□□ -1.13
PVT1-201ENST00000504719 SYNE1Q8NF91 8797 aaKnown RBP7.9□□□□□ -1.14
PVT1-201ENST00000504719 KRTAP5-7Q6L8G8 165 aa7.85□□□□□ -1.15
PVT1-201ENST00000504719 KRTAP9-6A8MVA2 160 aa7.72□□□□□ -1.17
PVT1-201ENST00000504719 PMAIP1Q13794 54 aa7.72□□□□□ -1.17
PVT1-201ENST00000504719 MT1AP04731 61 aa7.68□□□□□ -1.18
PVT1-201ENST00000504719 KRTAP6-1Q3LI64 71 aa7.64□□□□□ -1.19
PVT1-201ENST00000504719 KRTAP5-2Q701N4 177 aa7.53□□□□□ -1.2
PVT1-201ENST00000504719 KRTAP9-4Q9BYQ2 154 aa7.43□□□□□ -1.22
PVT1-201ENST00000504719 KRTAP4-11Q9BYQ6 195 aa7.41□□□□□ -1.22
PVT1-201ENST00000504719 PRAC1Q96KF2 57 aa7.39□□□□□ -1.23
PVT1-201ENST00000504719 PRO0628Q9UI54 55 aa7.38□□□□□ -1.23
PVT1-201ENST00000504719 KRTAP6-2Q3LI66 62 aa7.29□□□□□ -1.24
PVT1-201ENST00000504719 KRTAP5-8O75690 187 aa7.17□□□□□ -1.26
PVT1-201ENST00000504719 MT3P25713 68 aa7.03□□□□□ -1.28
PVT1-201ENST00000504719 KTN1-AS1Q86SY8 53 aa7.01□□□□□ -1.29
PVT1-201ENST00000504719 OBSCNQ5VST9 7968 aa6.88□□□□□ -1.31
PVT1-201ENST00000504719 KRTAP9-9Q9BYP9 154 aa6.79□□□□□ -1.32
PVT1-201ENST00000504719 MUC5BQ9HC84 5762 aaPredicted RBP6.79□□□□□ -1.32
PVT1-201ENST00000504719 KRTAP5-1Q6L8H4 278 aa6.76□□□□□ -1.33
PVT1-201ENST00000504719 MUC5ACP98088 5654 aa6.72□□□□□ -1.33
PVT1-201ENST00000504719 AHNAKQ09666 5890 aaKnown RBP6.72□□□□□ -1.33
PVT1-201ENST00000504719 SVIPQ8NHG7 77 aa6.71□□□□□ -1.34
PVT1-201ENST00000504719 LCE1EQ5T753 118 aa6.45□□□□□ -1.38
PVT1-201ENST00000504719 LUZP6Q538Z0 58 aa6.18□□□□□ -1.42
PVT1-201ENST00000504719 KRTAP4-2Q9BYR5 136 aa6.12□□□□□ -1.43
PVT1-201ENST00000504719 LCE1BQ5T7P3 118 aa6.07□□□□□ -1.44
PVT1-201ENST00000504719 LCE1CQ5T751 118 aa6□□□□□ -1.45
PVT1-201ENST00000504719 LCE3DQ9BYE3 92 aa5.97□□□□□ -1.45
PVT1-201ENST00000504719 LCE3EQ5T5B0 92 aa5.66□□□□□ -1.5
PVT1-201ENST00000504719 KRTAP4-12Q9BQ66 201 aa5.53□□□□□ -1.52
PVT1-201ENST00000504719 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.46□□□□□ -1.54
PVT1-201ENST00000504719 KRTAP5-11Q6L8G4 156 aa5.43□□□□□ -1.54
PVT1-201ENST00000504719 LCE1FQ5T754 118 aa5.29□□□□□ -1.56
PVT1-201ENST00000504719 NDUFAF8A1L188 74 aa5.24□□□□□ -1.57
PVT1-201ENST00000504719 H3BS24 57 aa5.11□□□□□ -1.59
PVT1-201ENST00000504719 KRTAP21-2Q3LI59 83 aa5.04□□□□□ -1.6
PVT1-201ENST00000504719 PHGR1C9JFL3 82 aa4.74□□□□□ -1.65
PVT1-201ENST00000504719 KRTAP4-4Q9BYR3 166 aa4.6□□□□□ -1.67
PVT1-201ENST00000504719 PRM1P04553 51 aa4.45□□□□□ -1.7
PVT1-201ENST00000504719 MUC19Q7Z5P9 8384 aa4.25□□□□□ -1.73
PVT1-201ENST00000504719 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
PVT1-201ENST00000504719 INE1O15225 51 aa4.22□□□□□ -1.73
PVT1-201ENST00000504719 KRTAP21-1Q3LI58 79 aa3.6□□□□□ -1.83
PVT1-201ENST00000504719 MUC16Q8WXI7 14507 aa3.11□□□□□ -1.91
Retrieved 78 of 20,778 RNA–protein pairs in 9.3 ms