RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 KRTAP20-1Q3LI63 56 aa3.02□□□□□ -1.93
SKP2-203ENST00000504386 NEBP20929 6669 aa3.01□□□□□ -1.93
SKP2-203ENST00000504386 TNP1P09430 55 aa3.01□□□□□ -1.93
SKP2-203ENST00000504386 MIR22HGQ0VDD5 57 aa3.01□□□□□ -1.93
SKP2-203ENST00000504386 Q1T7F1 81 aa3.01□□□□□ -1.93
SKP2-203ENST00000504386 KMT2DO14686 5537 aa3□□□□□ -1.93
SKP2-203ENST00000504386 KRTAP2-3P0C7H8 128 aa2.98□□□□□ -1.93
SKP2-203ENST00000504386 KRTAP2-4Q9BYR9 128 aa2.98□□□□□ -1.93
SKP2-203ENST00000504386 RPS28P62857 69 aaKnown RBP2.97□□□□□ -1.93
SKP2-203ENST00000504386 PSPHP1O15172 72 aa2.96□□□□□ -1.94
SKP2-203ENST00000504386 SPRR2DP22532 72 aa2.95□□□□□ -1.94
SKP2-203ENST00000504386 MUC12Q9UKN1 5478 aa2.94□□□□□ -1.94
SKP2-203ENST00000504386 A6NED7 52 aa2.92□□□□□ -1.94
SKP2-203ENST00000504386 C10orf95Q9H7T3 257 aa2.92□□□□□ -1.94
SKP2-203ENST00000504386 MT3P25713 68 aa2.91□□□□□ -1.94
SKP2-203ENST00000504386 KRTAP25-1Q3LHN0 102 aa2.9□□□□□ -1.95
SKP2-203ENST00000504386 KRTAP2-2Q9BYT5 123 aa2.9□□□□□ -1.95
SKP2-203ENST00000504386 KRTAP19-7Q3SYF9 63 aa2.89□□□□□ -1.95
SKP2-203ENST00000504386 PP632Q6XCG6 107 aa2.89□□□□□ -1.95
SKP2-203ENST00000504386 KRTAP2-1Q9BYU5 128 aa2.89□□□□□ -1.95
SKP2-203ENST00000504386 MDN1Q9NU22 5596 aa2.88□□□□□ -1.95
SKP2-203ENST00000504386 MT1EP04732 61 aa2.88□□□□□ -1.95
SKP2-203ENST00000504386 KRTAP19-3Q7Z4W3 81 aa2.87□□□□□ -1.95
SKP2-203ENST00000504386 KRTAP19-5Q3LI72 72 aa2.85□□□□□ -1.95
SKP2-203ENST00000504386 LCE3AQ5TA76 89 aa2.85□□□□□ -1.95
SKP2-203ENST00000504386 MT1GP13640 62 aa2.84□□□□□ -1.95
SKP2-203ENST00000504386 CDC42SE1Q9NRR8 79 aa2.83□□□□□ -1.96
SKP2-203ENST00000504386 KRTAP12-3P60328 96 aa2.79□□□□□ -1.96
SKP2-203ENST00000504386 MT1LQ93083 61 aa2.77□□□□□ -1.97
SKP2-203ENST00000504386 ROMO1P60602 79 aa2.75□□□□□ -1.97
SKP2-203ENST00000504386 KRTAP5-1Q6L8H4 278 aa2.74□□□□□ -1.97
SKP2-203ENST00000504386 MT1MQ8N339 61 aa2.74□□□□□ -1.97
SKP2-203ENST00000504386 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
SKP2-203ENST00000504386 PRAC1Q96KF2 57 aa2.71□□□□□ -1.98
SKP2-203ENST00000504386 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
SKP2-203ENST00000504386 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
SKP2-203ENST00000504386 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
SKP2-203ENST00000504386 DSTQ03001 7570 aaKnown RBP2.61□□□□□ -1.99
SKP2-203ENST00000504386 NDUFAF8A1L188 74 aa2.6□□□□□ -1.99
SKP2-203ENST00000504386 BRK1Q8WUW1 75 aa2.6□□□□□ -1.99
SKP2-203ENST00000504386 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
SKP2-203ENST00000504386 LCE3CQ5T5A8 94 aa2.57□□□□□ -2
SKP2-203ENST00000504386 LCE1FQ5T754 118 aa2.56□□□□□ -2
SKP2-203ENST00000504386 MT4P47944 62 aa2.53□□□□□ -2
SKP2-203ENST00000504386 KRTAP12-4P60329 112 aa2.5□□□□□ -2.01
SKP2-203ENST00000504386 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
SKP2-203ENST00000504386 SPRR5A0A1B0GTR4 108 aa2.47□□□□□ -2.01
SKP2-203ENST00000504386 PMAIP1Q13794 54 aa2.47□□□□□ -2.01
SKP2-203ENST00000504386 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
SKP2-203ENST00000504386 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.03
SKP2-203ENST00000504386 MT1AP04731 61 aa2.39□□□□□ -2.03
SKP2-203ENST00000504386 PRO0628Q9UI54 55 aa2.38□□□□□ -2.03
SKP2-203ENST00000504386 KRTAP9-6A8MVA2 160 aa2.37□□□□□ -2.03
SKP2-203ENST00000504386 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
SKP2-203ENST00000504386 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
SKP2-203ENST00000504386 KRTAP6-1Q3LI64 71 aa2.31□□□□□ -2.04
SKP2-203ENST00000504386 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
SKP2-203ENST00000504386 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
SKP2-203ENST00000504386 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
SKP2-203ENST00000504386 KTN1-AS1Q86SY8 53 aa2.25□□□□□ -2.05
SKP2-203ENST00000504386 SYNE1Q8NF91 8797 aaKnown RBP2.22□□□□□ -2.05
SKP2-203ENST00000504386 KRTAP6-2Q3LI66 62 aa2.21□□□□□ -2.06
SKP2-203ENST00000504386 LUZP6Q538Z0 58 aa2.18□□□□□ -2.06
SKP2-203ENST00000504386 LCE3EQ5T5B0 92 aa2.17□□□□□ -2.06
SKP2-203ENST00000504386 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
SKP2-203ENST00000504386 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
SKP2-203ENST00000504386 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
SKP2-203ENST00000504386 LCE3DQ9BYE3 92 aa1.9□□□□□ -2.11
SKP2-203ENST00000504386 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
SKP2-203ENST00000504386 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
SKP2-203ENST00000504386 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
SKP2-203ENST00000504386 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
SKP2-203ENST00000504386 INE1O15225 51 aa1.47□□□□□ -2.17
SKP2-203ENST00000504386 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
SKP2-203ENST00000504386 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
SKP2-203ENST00000504386 PRM1P04553 51 aa1.37□□□□□ -2.19
SKP2-203ENST00000504386 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
SKP2-203ENST00000504386 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 163.1 ms