RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 KTN1-AS1Q86SY8 53 aa2.77□□□□□ -1.97
TOPBP1-203ENST00000503464 PRAC1Q96KF2 57 aa2.77□□□□□ -1.97
TOPBP1-203ENST00000503464 PRO2289Q9P1D8 64 aa2.77□□□□□ -1.97
TOPBP1-203ENST00000503464 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
TOPBP1-203ENST00000503464 KRTAP25-1Q3LHN0 102 aa2.74□□□□□ -1.97
TOPBP1-203ENST00000503464 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
TOPBP1-203ENST00000503464 KMT2DO14686 5537 aa2.74□□□□□ -1.97
TOPBP1-203ENST00000503464 TNP1P09430 55 aa2.73□□□□□ -1.97
TOPBP1-203ENST00000503464 KRTAP10-12P60413 245 aa2.73□□□□□ -1.97
TOPBP1-203ENST00000503464 LCE3AQ5TA76 89 aa2.69□□□□□ -1.98
TOPBP1-203ENST00000503464 LCE1AQ5T7P2 110 aa2.67□□□□□ -1.98
TOPBP1-203ENST00000503464 SVIPQ8NHG7 77 aa2.65□□□□□ -1.99
TOPBP1-203ENST00000503464 PP632Q6XCG6 107 aa2.62□□□□□ -1.99
TOPBP1-203ENST00000503464 KRTAP8-1Q8IUC2 63 aa2.62□□□□□ -1.99
TOPBP1-203ENST00000503464 MACF1Q9UPN3 7388 aaKnown RBP2.61□□□□□ -1.99
TOPBP1-203ENST00000503464 KRTAP19-5Q3LI72 72 aa2.59□□□□□ -1.99
TOPBP1-203ENST00000503464 KRTAP19-7Q3SYF9 63 aa2.59□□□□□ -1.99
TOPBP1-203ENST00000503464 KRTAP20-1Q3LI63 56 aa2.56□□□□□ -2
TOPBP1-203ENST00000503464 SYNE2Q8WXH0 6885 aaKnown RBP2.56□□□□□ -2
TOPBP1-203ENST00000503464 KRTAP12-3P60328 96 aa2.55□□□□□ -2
TOPBP1-203ENST00000503464 MUC12Q9UKN1 5478 aa2.53□□□□□ -2
TOPBP1-203ENST00000503464 MT1EP04732 61 aa2.53□□□□□ -2
TOPBP1-203ENST00000503464 KRTAP2-2Q9BYT5 123 aa2.52□□□□□ -2.01
TOPBP1-203ENST00000503464 MT3P25713 68 aa2.51□□□□□ -2.01
TOPBP1-203ENST00000503464 MT1LQ93083 61 aa2.47□□□□□ -2.01
TOPBP1-203ENST00000503464 SPRR2FQ96RM1 72 aa2.47□□□□□ -2.01
TOPBP1-203ENST00000503464 MDN1Q9NU22 5596 aa2.46□□□□□ -2.02
TOPBP1-203ENST00000503464 NEBP20929 6669 aa2.44□□□□□ -2.02
TOPBP1-203ENST00000503464 KRTAP6-3Q3LI67 103 aa2.44□□□□□ -2.02
TOPBP1-203ENST00000503464 KRTAP19-3Q7Z4W3 81 aa2.42□□□□□ -2.02
TOPBP1-203ENST00000503464 LCE3CQ5T5A8 94 aa2.39□□□□□ -2.03
TOPBP1-203ENST00000503464 SPRR5A0A1B0GTR4 108 aa2.38□□□□□ -2.03
TOPBP1-203ENST00000503464 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
TOPBP1-203ENST00000503464 MT1MQ8N339 61 aa2.38□□□□□ -2.03
TOPBP1-203ENST00000503464 KRTAP4-3Q9BYR4 195 aa2.38□□□□□ -2.03
TOPBP1-203ENST00000503464 MT1GP13640 62 aa2.37□□□□□ -2.03
TOPBP1-203ENST00000503464 OBSCNQ5VST9 7968 aa2.36□□□□□ -2.03
TOPBP1-203ENST00000503464 SPRR2EP22531 72 aa2.36□□□□□ -2.03
TOPBP1-203ENST00000503464 SPRR2BP35325 72 aa2.36□□□□□ -2.03
TOPBP1-203ENST00000503464 SPRR2AP35326 72 aa2.36□□□□□ -2.03
TOPBP1-203ENST00000503464 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
TOPBP1-203ENST00000503464 KRTAP2-3P0C7H8 128 aa2.34□□□□□ -2.03
TOPBP1-203ENST00000503464 KRTAP2-4Q9BYR9 128 aa2.34□□□□□ -2.03
TOPBP1-203ENST00000503464 KRTAP9-6A8MVA2 160 aa2.33□□□□□ -2.04
TOPBP1-203ENST00000503464 SPRR2DP22532 72 aa2.27□□□□□ -2.05
TOPBP1-203ENST00000503464 DSTQ03001 7570 aaKnown RBP2.24□□□□□ -2.05
TOPBP1-203ENST00000503464 KRTAP2-1Q9BYU5 128 aa2.23□□□□□ -2.05
TOPBP1-203ENST00000503464 A0A0A0MQY5 61 aa2.19□□□□□ -2.06
TOPBP1-203ENST00000503464 KRTAP5-5Q701N2 237 aaPredicted RBP2.18□□□□□ -2.06
TOPBP1-203ENST00000503464 LUZP6Q538Z0 58 aa2.16□□□□□ -2.06
TOPBP1-203ENST00000503464 NDUFAF8A1L188 74 aa2.15□□□□□ -2.07
TOPBP1-203ENST00000503464 MT1AP04731 61 aa2.09□□□□□ -2.07
TOPBP1-203ENST00000503464 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.07
TOPBP1-203ENST00000503464 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
TOPBP1-203ENST00000503464 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
TOPBP1-203ENST00000503464 SYNE1Q8NF91 8797 aaKnown RBP2.02□□□□□ -2.09
TOPBP1-203ENST00000503464 LCE1FQ5T754 118 aa2.02□□□□□ -2.09
TOPBP1-203ENST00000503464 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
TOPBP1-203ENST00000503464 MT4P47944 62 aa1.98□□□□□ -2.09
TOPBP1-203ENST00000503464 KRTAP5-10Q6L8G5 202 aa1.98□□□□□ -2.09
TOPBP1-203ENST00000503464 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
TOPBP1-203ENST00000503464 KRTAP12-4P60329 112 aa1.94□□□□□ -2.1
TOPBP1-203ENST00000503464 KRTAP20-2Q3LI61 65 aa1.94□□□□□ -2.1
TOPBP1-203ENST00000503464 KRTAP6-2Q3LI66 62 aa1.92□□□□□ -2.1
TOPBP1-203ENST00000503464 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.11
TOPBP1-203ENST00000503464 LCE3DQ9BYE3 92 aa1.76□□□□□ -2.13
TOPBP1-203ENST00000503464 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
TOPBP1-203ENST00000503464 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
TOPBP1-203ENST00000503464 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
TOPBP1-203ENST00000503464 INE1O15225 51 aa1.73□□□□□ -2.13
TOPBP1-203ENST00000503464 LCE3EQ5T5B0 92 aa1.72□□□□□ -2.13
TOPBP1-203ENST00000503464 MUC5ACP98088 5654 aa1.71□□□□□ -2.14
TOPBP1-203ENST00000503464 PRM1P04553 51 aa1.5□□□□□ -2.17
TOPBP1-203ENST00000503464 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
TOPBP1-203ENST00000503464 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
TOPBP1-203ENST00000503464 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
TOPBP1-203ENST00000503464 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
TOPBP1-203ENST00000503464 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 6.7 ms