RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 MT1MQ8N339 61 aa6.91□□□□□ -1.3
UBE2D3-215ENST00000503418 MT1LQ93083 61 aa6.91□□□□□ -1.3
UBE2D3-215ENST00000503418 LCE3AQ5TA76 89 aa6.9□□□□□ -1.3
UBE2D3-215ENST00000503418 TNP1P09430 55 aa6.89□□□□□ -1.31
UBE2D3-215ENST00000503418 C10orf95Q9H7T3 257 aa6.89□□□□□ -1.31
UBE2D3-215ENST00000503418 GPR98Q8WXG9 6306 aa6.87□□□□□ -1.31
UBE2D3-215ENST00000503418 MIR22HGQ0VDD5 57 aa6.85□□□□□ -1.31
UBE2D3-215ENST00000503418 LCE1DQ5T752 114 aa6.85□□□□□ -1.31
UBE2D3-215ENST00000503418 LCE4AQ5TA78 99 aa6.79□□□□□ -1.32
UBE2D3-215ENST00000503418 MT4P47944 62 aa6.78□□□□□ -1.32
UBE2D3-215ENST00000503418 KRTAP4-3Q9BYR4 195 aa6.77□□□□□ -1.33
UBE2D3-215ENST00000503418 A6NED7 52 aa6.76□□□□□ -1.33
UBE2D3-215ENST00000503418 HMCN1Q96RW7 5635 aa6.7□□□□□ -1.34
UBE2D3-215ENST00000503418 K7ERS5 55 aa6.67□□□□□ -1.34
UBE2D3-215ENST00000503418 KRTAP5-4Q6L8H1 288 aa6.63□□□□□ -1.35
UBE2D3-215ENST00000503418 KRTAP12-3P60328 96 aa6.62□□□□□ -1.35
UBE2D3-215ENST00000503418 KRTAP4-7Q9BYR0 210 aa6.59□□□□□ -1.35
UBE2D3-215ENST00000503418 KRTAP4-6Q9BYQ5 205 aa6.55□□□□□ -1.36
UBE2D3-215ENST00000503418 CDC42SE1Q9NRR8 79 aa6.54□□□□□ -1.36
UBE2D3-215ENST00000503418 AHNAK2Q8IVF2 5795 aa6.52□□□□□ -1.37
UBE2D3-215ENST00000503418 KRTAP25-1Q3LHN0 102 aa6.42□□□□□ -1.38
UBE2D3-215ENST00000503418 KRTAP5-10Q6L8G5 202 aa6.4□□□□□ -1.38
UBE2D3-215ENST00000503418 KRTAP5-5Q701N2 237 aaPredicted RBP6.32□□□□□ -1.4
UBE2D3-215ENST00000503418 BRK1Q8WUW1 75 aa6.3□□□□□ -1.4
UBE2D3-215ENST00000503418 KRTAP20-2Q3LI61 65 aa6.29□□□□□ -1.4
UBE2D3-215ENST00000503418 ROMO1P60602 79 aa6.27□□□□□ -1.41
UBE2D3-215ENST00000503418 LOC100996750A0A140TA64 210 aa6.25□□□□□ -1.41
UBE2D3-215ENST00000503418 KRTAP5-3Q6L8H2 238 aa6.23□□□□□ -1.41
UBE2D3-215ENST00000503418 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
UBE2D3-215ENST00000503418 KRTAP12-4P60329 112 aa6.22□□□□□ -1.41
UBE2D3-215ENST00000503418 KRTAP19-4Q3LI73 84 aa6.17□□□□□ -1.42
UBE2D3-215ENST00000503418 KRTAP5-7Q6L8G8 165 aa6.16□□□□□ -1.42
UBE2D3-215ENST00000503418 KRTAP15-1Q3LI76 137 aa6.15□□□□□ -1.42
UBE2D3-215ENST00000503418 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
UBE2D3-215ENST00000503418 SYNE1Q8NF91 8797 aaKnown RBP6.09□□□□□ -1.43
UBE2D3-215ENST00000503418 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
UBE2D3-215ENST00000503418 PMAIP1Q13794 54 aa5.94□□□□□ -1.46
UBE2D3-215ENST00000503418 MT1AP04731 61 aa5.87□□□□□ -1.47
UBE2D3-215ENST00000503418 KRTAP6-1Q3LI64 71 aa5.86□□□□□ -1.47
UBE2D3-215ENST00000503418 PRO0628Q9UI54 55 aa5.86□□□□□ -1.47
UBE2D3-215ENST00000503418 KRTAP5-2Q701N4 177 aa5.79□□□□□ -1.48
UBE2D3-215ENST00000503418 KRTAP4-11Q9BYQ6 195 aa5.77□□□□□ -1.49
UBE2D3-215ENST00000503418 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
UBE2D3-215ENST00000503418 KRTAP9-4Q9BYQ2 154 aa5.69□□□□□ -1.5
UBE2D3-215ENST00000503418 KRTAP6-2Q3LI66 62 aa5.62□□□□□ -1.51
UBE2D3-215ENST00000503418 PRAC1Q96KF2 57 aa5.61□□□□□ -1.51
UBE2D3-215ENST00000503418 KRTAP5-8O75690 187 aa5.57□□□□□ -1.52
UBE2D3-215ENST00000503418 KTN1-AS1Q86SY8 53 aa5.51□□□□□ -1.53
UBE2D3-215ENST00000503418 OBSCNQ5VST9 7968 aa5.47□□□□□ -1.53
UBE2D3-215ENST00000503418 MT3P25713 68 aa5.38□□□□□ -1.55
UBE2D3-215ENST00000503418 MUC5BQ9HC84 5762 aaPredicted RBP5.36□□□□□ -1.55
UBE2D3-215ENST00000503418 AHNAKQ09666 5890 aaKnown RBP5.34□□□□□ -1.56
UBE2D3-215ENST00000503418 MUC5ACP98088 5654 aa5.33□□□□□ -1.56
UBE2D3-215ENST00000503418 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
UBE2D3-215ENST00000503418 SVIPQ8NHG7 77 aa5.26□□□□□ -1.57
UBE2D3-215ENST00000503418 KRTAP5-1Q6L8H4 278 aa5.22□□□□□ -1.57
UBE2D3-215ENST00000503418 LCE1EQ5T753 118 aa4.93□□□□□ -1.62
UBE2D3-215ENST00000503418 LCE1BQ5T7P3 118 aa4.73□□□□□ -1.65
UBE2D3-215ENST00000503418 LUZP6Q538Z0 58 aa4.7□□□□□ -1.66
UBE2D3-215ENST00000503418 KRTAP4-2Q9BYR5 136 aa4.7□□□□□ -1.66
UBE2D3-215ENST00000503418 LCE1CQ5T751 118 aa4.59□□□□□ -1.67
UBE2D3-215ENST00000503418 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
UBE2D3-215ENST00000503418 KRTAP4-12Q9BQ66 201 aa4.33□□□□□ -1.72
UBE2D3-215ENST00000503418 NDUFAF8A1L188 74 aa4.18□□□□□ -1.74
UBE2D3-215ENST00000503418 KRTAP5-11Q6L8G4 156 aa4.17□□□□□ -1.74
UBE2D3-215ENST00000503418 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.15□□□□□ -1.75
UBE2D3-215ENST00000503418 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
UBE2D3-215ENST00000503418 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
UBE2D3-215ENST00000503418 KRTAP21-2Q3LI59 83 aa3.84□□□□□ -1.79
UBE2D3-215ENST00000503418 PHGR1C9JFL3 82 aa3.76□□□□□ -1.81
UBE2D3-215ENST00000503418 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
UBE2D3-215ENST00000503418 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
UBE2D3-215ENST00000503418 INE1O15225 51 aa3.44□□□□□ -1.86
UBE2D3-215ENST00000503418 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
UBE2D3-215ENST00000503418 PRM1P04553 51 aa3.23□□□□□ -1.89
UBE2D3-215ENST00000503418 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
UBE2D3-215ENST00000503418 H3BS24 57 aa2.72□□□□□ -1.97
UBE2D3-215ENST00000503418 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 14.5 ms