RNA–Protein interactions for RNA: ENST00000502944.1

MATR3-204, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 362 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-204ENST00000502944 MT1HP80294 61 aa3.05□□□□□ -1.92
MATR3-204ENST00000502944 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
MATR3-204ENST00000502944 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
MATR3-204ENST00000502944 PRO2289Q9P1D8 64 aa3.01□□□□□ -1.93
MATR3-204ENST00000502944 MT2AP02795 61 aa2.98□□□□□ -1.93
MATR3-204ENST00000502944 KRTAP19-8Q3LI54 63 aa2.98□□□□□ -1.93
MATR3-204ENST00000502944 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
MATR3-204ENST00000502944 HERC1Q15751 4861 aa2.97□□□□□ -1.93
MATR3-204ENST00000502944 HMCN2Q8NDA2 5059 aa2.95□□□□□ -1.94
MATR3-204ENST00000502944 MT1FP04733 61 aa2.93□□□□□ -1.94
MATR3-204ENST00000502944 PCLOQ9Y6V0 5065 aa2.89□□□□□ -1.95
MATR3-204ENST00000502944 MUC2Q02817 5179 aa2.89□□□□□ -1.95
MATR3-204ENST00000502944 LCE3AQ5TA76 89 aa2.87□□□□□ -1.95
MATR3-204ENST00000502944 KRTAP8-1Q8IUC2 63 aa2.84□□□□□ -1.95
MATR3-204ENST00000502944 MT1BP07438 61 aa2.83□□□□□ -1.96
MATR3-204ENST00000502944 SPRR5A0A1B0GTR4 108 aa2.8□□□□□ -1.96
MATR3-204ENST00000502944 MT1XP80297 61 aa2.8□□□□□ -1.96
MATR3-204ENST00000502944 RNF213Q63HN8 5207 aa2.8□□□□□ -1.96
MATR3-204ENST00000502944 KRTAP12-3P60328 96 aa2.79□□□□□ -1.96
MATR3-204ENST00000502944 FAT4Q6V0I7 4981 aa2.76□□□□□ -1.97
MATR3-204ENST00000502944 UBR4Q5T4S7 5183 aa2.69□□□□□ -1.98
MATR3-204ENST00000502944 KRTAP19-5Q3LI72 72 aa2.62□□□□□ -1.99
MATR3-204ENST00000502944 INE1O15225 51 aa2.61□□□□□ -1.99
MATR3-204ENST00000502944 KRTAP5-8O75690 187 aa2.58□□□□□ -2
MATR3-204ENST00000502944 KRTAP19-6Q3LI70 58 aa2.56□□□□□ -2
MATR3-204ENST00000502944 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
MATR3-204ENST00000502944 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
MATR3-204ENST00000502944 KRTAP19-7Q3SYF9 63 aa2.48□□□□□ -2.01
MATR3-204ENST00000502944 MT1EP04732 61 aa2.46□□□□□ -2.02
MATR3-204ENST00000502944 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
MATR3-204ENST00000502944 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
MATR3-204ENST00000502944 MT1LQ93083 61 aa2.45□□□□□ -2.02
MATR3-204ENST00000502944 MT1GP13640 62 aa2.44□□□□□ -2.02
MATR3-204ENST00000502944 USH2AO75445 5202 aa2.4□□□□□ -2.03
MATR3-204ENST00000502944 KRTAP19-3Q7Z4W3 81 aa2.38□□□□□ -2.03
MATR3-204ENST00000502944 KRTAP2-3P0C7H8 128 aa2.35□□□□□ -2.03
MATR3-204ENST00000502944 KRTAP2-4Q9BYR9 128 aa2.35□□□□□ -2.03
MATR3-204ENST00000502944 KRTAP2-1Q9BYU5 128 aa2.35□□□□□ -2.03
MATR3-204ENST00000502944 SSPOA2VEC9 5147 aa2.31□□□□□ -2.04
MATR3-204ENST00000502944 MT1MQ8N339 61 aa2.31□□□□□ -2.04
MATR3-204ENST00000502944 SPRR2FQ96RM1 72 aa2.31□□□□□ -2.04
MATR3-204ENST00000502944 KMT2DO14686 5537 aa2.24□□□□□ -2.05
MATR3-204ENST00000502944 CRCT1Q9UGL9 99 aa2.23□□□□□ -2.05
MATR3-204ENST00000502944 FSIP2Q5CZC0 6907 aa2.19□□□□□ -2.06
MATR3-204ENST00000502944 FCGBPQ9Y6R7 5405 aaPredicted RBP2.17□□□□□ -2.06
MATR3-204ENST00000502944 SPRR2EP22531 72 aa2.15□□□□□ -2.07
MATR3-204ENST00000502944 SPRR2BP35325 72 aa2.15□□□□□ -2.07
MATR3-204ENST00000502944 SPRR2AP35326 72 aa2.15□□□□□ -2.07
MATR3-204ENST00000502944 MT1AP04731 61 aa2.14□□□□□ -2.07
MATR3-204ENST00000502944 KRTAP6-3Q3LI67 103 aa2.11□□□□□ -2.07
MATR3-204ENST00000502944 MACF1Q9UPN3 7388 aaKnown RBP2.1□□□□□ -2.07
MATR3-204ENST00000502944 KRTAP12-4P60329 112 aa2.09□□□□□ -2.07
MATR3-204ENST00000502944 SPRR2DP22532 72 aa2.08□□□□□ -2.08
MATR3-204ENST00000502944 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
MATR3-204ENST00000502944 KRTAP6-1Q3LI64 71 aa2.02□□□□□ -2.09
MATR3-204ENST00000502944 MUC12Q9UKN1 5478 aa2.02□□□□□ -2.09
MATR3-204ENST00000502944 SYNE2Q8WXH0 6885 aaKnown RBP2.01□□□□□ -2.09
MATR3-204ENST00000502944 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
MATR3-204ENST00000502944 DSTQ03001 7570 aaKnown RBP1.95□□□□□ -2.1
MATR3-204ENST00000502944 MDN1Q9NU22 5596 aa1.89□□□□□ -2.11
MATR3-204ENST00000502944 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
MATR3-204ENST00000502944 SYNE1Q8NF91 8797 aaKnown RBP1.86□□□□□ -2.11
MATR3-204ENST00000502944 NEBP20929 6669 aa1.82□□□□□ -2.12
MATR3-204ENST00000502944 PRM1P04553 51 aa1.79□□□□□ -2.12
MATR3-204ENST00000502944 HMCN1Q96RW7 5635 aa1.76□□□□□ -2.13
MATR3-204ENST00000502944 MT4P47944 62 aa1.75□□□□□ -2.13
MATR3-204ENST00000502944 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
MATR3-204ENST00000502944 KRTAP20-2Q3LI61 65 aa1.74□□□□□ -2.13
MATR3-204ENST00000502944 KRTAP20-1Q3LI63 56 aa1.74□□□□□ -2.13
MATR3-204ENST00000502944 KRTAP5-10Q6L8G5 202 aa1.46□□□□□ -2.18
MATR3-204ENST00000502944 MUC5ACP98088 5654 aa1.4□□□□□ -2.19
MATR3-204ENST00000502944 AHNAK2Q8IVF2 5795 aa1.24□□□□□ -2.21
MATR3-204ENST00000502944 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
MATR3-204ENST00000502944 GPR98Q8WXG9 6306 aa1.13□□□□□ -2.23
MATR3-204ENST00000502944 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
MATR3-204ENST00000502944 MUC5BQ9HC84 5762 aaPredicted RBP1.1□□□□□ -2.23
MATR3-204ENST00000502944 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
MATR3-204ENST00000502944 AHNAKQ09666 5890 aaKnown RBP0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 46.6 ms